ZMP
hp1bp3
Ensembl ID:
ZFIN ID:
Human Orthologue:
HP1BP3
Human Description:
heterochromatin protein 1, binding protein 3 [Source:HGNC Symbol;Acc:24973]
Mouse Orthologue:
Hp1bp3
Mouse Description:
heterochromatin protein 1, binding protein 3 Gene [Source:MGI Symbol;Acc:MGI:109369]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa2596 | Essential Splice Site | F2 line generated | Not yet available |
sa35145 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa2596
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000077496 | Essential Splice Site | 247 | 595 | 5 | 12 |
Genomic Location (Zv9):
Chromosome 11 (position 38782257)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 11 | 37349276 |
GRCz11 | 11 | 37616481 |
KASP Assay ID:
554-2765.1 (used for ordering genotyping assays)
KASP Sequence:
TCTACAAGAGGTCTCTGAAGCGAATGGTTGAGAAGGGTGTTGYCAGACAG[G/A]TGATTTGCATTTTAACACATGAGTATTTTTAGTTTTACATATACAGYAAG
Long Flanking Sequence:
TCTGTATTCCATGCTGAAACCTGCCTGAGAATCAATAAAACTGTTAATCGCTAAAACCTTGACTTTTTCAAACCGCAGTATTCCTTGAAATTGGTTACTGTCCAAATGCCTAGTATGTATAAGAAAAATGCTGTTCTGCTAATTTAGCTTTTTTGTTCCCTTTAAATGTCTATATTTAGAGAATATATTGCCCTATTTGTTTCCTTCAATTAATGCATGTATTATTTAAGTTTTCATTTGTTGGTCTTTAAATGGTTTTATGAAGGTAAAGGTTAAACGTTTAAGAGTTTAGAAGCAAAATCGAAAGTCTGAAAAACTGTGAAAAGTCTCATATGTACATCTTCCTGTAGAGTTGCAAAGAAGACCGCAGTGGTGCTTCTTCAATCATCATTATGAAATACGTCAGGAAGAAGTATCCCGCTGTGGAAATGGACAAAAGGACCAAAAACCTCTACAAGAGGTCTCTGAAGCGAATGGTTGAGAAGGGTGTTGTCAGACAG[G/A]TGATTTGCATTTTAACACATGAGTATTTTTAGTTTTACATATACAGTAAGTCAACTTTGTCCTGTCTTCTTAACCCACAGCTGAAGGGTAAAGGCTTTTCTGGAAGTTTCACCATTGGGAAGGTATCTAAATATAGTGTAACTTTCATTGCTGATAAATACAGTGTAAATGAAGTACTTTTTAAGGATTGATTTATTTTTTTGTCAATGTTGTTGTGTTGTGTAGAAGCCGGCTGCATCTGCTTTACCCAAGGAGACACTGGGAGAGTCTCTACCTCTGATCATCACCCGTCTTTGTGAACCCAAAGAGGCTTCATACATCCTGATCAAGAAGTACCTGGAACAACACTTCCCTCAACTCAATGTGGAAAACAGGTCATTATTGACGTCCTATTAGTAGACGGGGGTGCAATATTGACCCTTAGTTTTTCTTTGAAAATATTTTCATTGGTGAAACAAAAAAAAAGACAATATTATGTCTAAAACTCACATTTACATTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35145
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000077496 | Essential Splice Site | 431 | 595 | 10 | 12 |
Genomic Location (Zv9):
Chromosome 11 (position 38788320)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 11 | 37355339 |
GRCz11 | 11 | 37622544 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTCATGGACTGAGTGGGTCATACCAGCTTAGTTATCCATTTTACCCAAG[G/A]TAAGTTCAATTGTAAGTTCAATGTAAAGAAGAGACCGTTGTGTAATAAAT
Long Flanking Sequence:
GGAAAATCATTCTTCGGTGAAAATAAAACTGATTTGATGAGAGTGTACATTTGTATTGGACAGTTGAAGAAAGCCGGGAATAAGGTCCTCATGGGTGGCGGTCTGCTGGAAGACGCTGTTGTGGCCGCCATCACTGCTATGAATGAGCCCAAGACCTGCAGCATCACCATACTGCGCAAATTCCTGATGCAGAGAAAGGAGAAGAACGCCTTTCCAGTGGGTAAGGAACACTTCTAGCTTATTGCAGATTCCTAGAGTTAACTTTCTGTCCGAGGCCTGAGGTTTTCAAATGTGTCCTTTTAGTATCAGTAATAACCCTAGTATCTCATTTGGTGTATTTTAATGTGTTATGCAGACTCCTTATGAATGATTTGTGTCTTACTACTAGTGTCTCATCTGAAGAGAACCTTGCAGAAGTGTAAAGTGATGGGATGGATGGAGCAGATTTCTGGTCATGGACTGAGTGGGTCATACCAGCTTAGTTATCCATTTTACCCAAG[G/A]TAAGTTCAATTGTAAGTTCAATGTAAAGAAGAGACCGTTGTGTAATAAATACTGCACTTACTCACCTTATTCTTCGCCGACGAGCGGGCACAGCCATTTGAATCTTTTTGGCTCGAGACTTCCGGTCTCATTACCTTCCATTCATTTTTAGACATTAAAAACTGCTCGTTTCGCTGTTTGATGTTGCAAACTGACATTTTATTATTATATTATTCTATATTATTCTACTTGATCTGTATAGTCATGCAAACATTTGTTTGTAGAGCAAGTAGTTTGACCGTTTTCTGCCGTTTATTATTCCTAGTCATTTCTCCCATAGACGACTAAATCAAAAGTTCTAAAACAATCGCAAAAACAGGCGCACTTCCACATTATAGAATAAGGTCAATAATCAGTGAATATAAGGTGGTTTCACTTTTGAAATGCGGTTTAAATTACTCCCGTTTTTTAATTCTTCTGAACACATTCAGGTGCTGCTTGTCATGCGAGGAACGCCATAG
Associated Phenotype:
Not determined