Busch Lab

ZMP

kdm5ba

Ensembl ID:
ENSDARG00000057093
ZFIN ID:
ZDB-GENE-030131-5379
Description:
lysine (K)-specific demethylase 5Ba [Source:RefSeq peptide;Acc:NP_001121799]
Human Orthologue:
KDM5B
Human Description:
lysine (K)-specific demethylase 5B [Source:HGNC Symbol;Acc:18039]
Mouse Orthologue:
Kdm5b
Mouse Description:
lysine (K)-specific demethylase 5B Gene [Source:MGI Symbol;Acc:MGI:1922855]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa16159 Nonsense Available for shipment Available now
sa31828 Nonsense Available for shipment Available now
sa14585 Nonsense Available for shipment Available now
sa21908 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa16159
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058729 Nonsense 647 1483 15 29
ENSDART00000135443 Nonsense 647 1477 16 28
Genomic Location (Zv9):
Chromosome 11 (position 25769573)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24598398
GRCz11 11 24836014
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTRATCCCATTGTGTTTGTGCTGTTCTCCAGGGTATGTGGCACTCCCAG[C/T]AGGTTGACTATGATATACTGCCAGATGAGGAAAGGCAGTGTGCTAAATGC
Long Flanking Sequence:
TTTTAATGCTGGATTGGTATAAACAATACATTAGAACAATCGTGAACCAAACCCCTGGATTTCTTGTCTTTCAGTTGCCTCTTGGTCGACAGTGTGTGGAGCACTACCGATCCCTCTACAGATACTGTGTTTTCTCCCATGATGAGATGGCCTGTAACATTGCCGCCAAGGCAGACAGTCTAGAGTTGGAACTGGCATGCGCTGTCCAGAAGGACATGAACGCTATGATTCAGGAGGAGAAGATACTCAGAGAAAAAGCCTATAAGCTGGTGGGTGGCTATTTTAAAGGCAGCGAGTTGGTTTAAGCTTCTGTAACTTGCACTTGCTGACCCAGTTGGTTAAGTAACCTGTCTAATAAGTTCTGTGTATCTATAATTGTATATATTTTATAAACAATTAAACCTTTATAGCTGTTGCGCCTACTCGCTTTGTTTTGTCTGCCTATTTCTAATTGATCCCATTGTGTTTGTGCTGTTCTCCAGGGTATGTGGCACTCCCAG[C/T]AGGTTGACTATGATATACTGCCAGATGAGGAAAGGCAGTGTGCTAAATGCCGGACCACCTGTTACCTGTCTGCCATCACCTGTCCCTGTAGCCCTGAACAGGTGGTCTGTCTCCACCACACCCAGGACCTCTGCTCTTGCCCTGCTAGAAACTACACGCTCAAGTACGTGTTTGCTAAAGCGAGACATTACCGCATGCCATGGGGTTTAATATTTGGCACTGCTGATCAAATGTTAAGCAGTTGTTGCTTTTATTCCTCATTTATCTTTTTTTTTTTTGGCTTTTTACTTTCAACAGCTATAAATACACACTTGCCGAGCTCAAGACATTTTTCCAGGCTTTGACGGCTCGTGCTGAGTCCTATGATGACTGGGCTTCTAAAGTTAACAAGATTCTGAAAGCCGATCAAGACAATAAAAGTGGTGAGTTGTTGTTGTTGCAGTGTGTTTGTTTTATTTTAAAATATATATCCATCTTGTATTACTTTAGAAAGTAGGGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31828
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058729 Nonsense 761 1483 17 29
ENSDART00000135443 Nonsense 761 1477 18 28
Genomic Location (Zv9):
Chromosome 11 (position 25774095)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24602920
GRCz11 11 24840536
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGAGGAGCTCCGCTGTTTGTTGGCAGAAGCAGAGAAGAAAATGTACCCC[G/T]AGACCGACCTGCTAAATGACATGCGTCAGGTCATCCAGAATGCAGATAGA
Long Flanking Sequence:
ATTAGTTATTAAAAACATTTTAACAAATTTTCCTTTTTTTAAATACTAAGAATTTTAATACTACTACAGTAAAGTCAACAGTTTATCAAAACATTTTTAAAATTAGTTTTAAAACAAGAATAGATGTTTTTCAGTAGTTTTATGACAATTGATCAAAGGTTTTGATCCACTTAGTGCATGCGTGCGTGACACAATCTCCTTGTAATAGCAGTGAGATCAGAGAACAGTGTCTGATTTATGTAGGTAGAAAAATATGGAAATGTATTATCAATAAGTAGGTGCCATTTAAGAGTACTTTGAGTTCTTCTCATCAAAACAGTTCTGTTCCGATAAATGACAGCTACAGTAATGTGTAATTTCACTCATTTGAACTTCAGGTATTATTCAAGTACTTGGCTCAATCATTGCATTTATTTCTTTAAAGTTTTAAATATTTTTTTATGTTAGATTTGGAGGAGCTCCGCTGTTTGTTGGCAGAAGCAGAGAAGAAAATGTACCCC[G/T]AGACCGACCTGCTAAATGACATGCGTCAGGTCATCCAGAATGCAGATAGATGTACCATAATGGCCCAACAACTCCTCAATGGCAAGAGACAGACCAGGTACATTTATTGCCTTCTCTGATATGTAAATCTATCCACAGATCTTGCAGAACGTGCTTTAAACTAATGCAAAACTGTAATCCTATACTCATCTTGGTGAACAGGTATCGCTCCGGTGGGGGAAAGTCTCAGAACCAGCTCACAGTAGAGGAACTGAGGGCATTCATCAATAAGCTATATGACCTTCCCTGTACCATCCGACAGGCTCCTTTTTTGAAGGTATTAAAATTTAAAACATCTTGCGTAATTCTCACAGTCCCCAGATTTCTTTTTTTAGTGTTCATTGTAAATGTTAATTTGAGTACAATCATAGTATTTCAAATTACATTTGGTCCACAGAATGTGATCTTTAATGATCTTACAATATAAAGACTATGTTCATGTGGCAGGTTTGACTATACGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14585
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058729 Nonsense 1451 1483 28 29
ENSDART00000135443 Nonsense 1447 1477 28 28
Genomic Location (Zv9):
Chromosome 11 (position 25784159)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24612984
GRCz11 11 24850600
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCGTCCTCTCAGGTAAACTGGGTCCAGTGTGACGGCAGCTGTAACCAGTG[G/A]TTCCACCAGGTCTGTGTGGGAGTGTCTGCTGAGCAGGCYGAAAACGAGGA
Long Flanking Sequence:
AAATCTAATTTTTTATCACAAAAGCTGAAGTATAAGACTTCTAACTGATTTTGAATGGCTTTTGTTGCATCTAGGATGCAGTTCCAGAAATCAAAAAGGAACACGAAAAGCTGGAGAAGAACAGCAAACGGCGCCTAGAAAAGGAAATCACAGAGGGCCAGTACAGAGACAAGATAAAGAAGCCTAAAAAAAAGAAGCCTAAAATGATTAAAGAGAGGAGAAGAGAGGAAAAACGAACCACCTCCCCCTCCAACTCCCTTTCTGACCCATCAAATTCAGACGACTCTGAGGAGGACTGGTCTGTGTGCTCGGCAAAGCGATGCCAGCAACCAGAAGGAAACGAGGTTAGTTCTAGCACAACTGAAATGTTTTTGTTGCTAAAGCAGTGCATCATTCTTGCTTGCGTAATTGGTTTATTTTAAGGCTCATGAATAATTAACACACTTTTCCTCGTCCTCTCAGGTAAACTGGGTCCAGTGTGACGGCAGCTGTAACCAGTG[G/A]TTCCACCAGGTCTGTGTGGGAGTGTCTGCTGAGCAGGCCGAAAACGAGGACTACATCTGCGTCAGCTGCGCAATAAACGATTTGTCAGAATAAGGACCAAAATCATGTTTTTTTCGAAGGATAGTCAAAAAGGCTCCCCGTTTTGCACATAAGTTACAGCACCAAGAATGCACCAGATATCATCCTCTTACTGAATCCCGCCCTCCTCGCTCCCTTGGTGCTACTGCCTTCTTGATAGGACTGTTAACAAGAAAAAAATCTGTATGATTCTTCAGCTTTTTGTTTTGTATTTTTGAAGATTTCCTTCTATAACACTTTTCTTTTCCTTCTCTAGAGAACGTGATGCATAGATGTACCTCAGGGGTTTCCATCCCATAAATGCAAAACAAAGGGGAACTTCGGCATCCCCAAAATGTATTTTTGTTCATATTTATTATTTTATTTCTTTCCCCAATCGCCTTGAGAATTTCTTAACATGAATTTGTCGATCTGGGCTATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21908
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058729 Nonsense 1463 1483 28 29
ENSDART00000135443 Nonsense 1459 1477 28 28
Genomic Location (Zv9):
Chromosome 11 (position 25784193)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24613018
GRCz11 11 24850634
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAGCTGTAACCAGTGGTTCCACCAGGTCTGTGTGGGAGTGTCTGCTGAG[C/T]AGGCCGAAAACGAGGACTACATCTGCGTCAGCTGCGCAATAAACGATTTG
Long Flanking Sequence:
AGACTTCTAACTGATTTTGAATGGCTTTTGTTGCATCTAGGATGCAGTTCCAGAAATCAAAAAGGAACACGAAAAGCTGGAGAAGAACAGCAAACGGCGCCTAGAAAAGGAAATCACAGAGGGCCAGTACAGAGACAAGATAAAGAAGCCTAAAAAAAAGAAGCCTAAAATGATTAAAGAGAGGAGAAGAGAGGAAAAACGAACCACCTCCCCCTCCAACTCCCTTTCTGACCCATCAAATTCAGACGACTCTGAGGAGGACTGGTCTGTGTGCTCGGCAAAGCGATGCCAGCAACCAGAAGGAAACGAGGTTAGTTCTAGCACAACTGAAATGTTTTTGTTGCTAAAGCAGTGCATCATTCTTGCTTGCGTAATTGGTTTATTTTAAGGCTCATGAATAATTAACACACTTTTCCTCGTCCTCTCAGGTAAACTGGGTCCAGTGTGACGGCAGCTGTAACCAGTGGTTCCACCAGGTCTGTGTGGGAGTGTCTGCTGAG[C/T]AGGCCGAAAACGAGGACTACATCTGCGTCAGCTGCGCAATAAACGATTTGTCAGAATAAGGACCAAAATCATGTTTTTTTCGAAGGATAGTCAAAAAGGCTCCCCGTTTTGCACATAAGTTACAGCACCAAGAATGCACCAGATATCATCCTCTTACTGAATCCCGCCCTCCTCGCTCCCTTGGTGCTACTGCCTTCTTGATAGGACTGTTAACAAGAAAAAAATCTGTATGATTCTTCAGCTTTTTGTTTTGTATTTTTGAAGATTTCCTTCTATAACACTTTTCTTTTCCTTCTCTAGAGAACGTGATGCATAGATGTACCTCAGGGGTTTCCATCCCATAAATGCAAAACAAAGGGGAACTTCGGCATCCCCAAAATGTATTTTTGTTCATATTTATTATTTTATTTCTTTCCCCAATCGCCTTGAGAATTTCTTAACATGAATTTGTCGATCTGGGCTATTTACACCAAATAATATTAATTGGACTAATCAAAATG
Associated Phenotype:
Not determined