ZMP

zgc:162738

Ensembl ID:

ENSDARG00000044925

ZFIN ID:

ZDB-GENE-070424-90

Description:

CDK5 regulatory subunit-associated protein 1 [Source:RefSeq peptide;Acc:NP_001103849]

Human Orthologue:

CDK5RAP1

Human Description:

CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:15880]

Mouse Orthologue:

Cdk5rap1

Mouse Description:

CDK5 regulatory subunit associated protein 1 Gene [Source:MGI Symbol;Acc:MGI:1914221]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa9397	Nonsense	Mutation detected in F1 DNA	Not yet available
sa35053	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa9397

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000104111	Nonsense	76	577	1	13

Genomic Location (Zv9):

Chromosome 11 (position 15843105)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	15346320
GRCz11	11	15480955

KASP Assay ID:

2260-4083.1 (used for ordering genotyping assays)

KASP Sequence:

GATTTCATCATGAGTTCTGATAAAAGCGATTTTGACGGCAGTGAGGAATA[T/A]GAGGAGCACTATATTCCTAAAWACATGTCAGACCATTCACGGAAAGGTCA

Long Flanking Sequence:

TCAAAGGACACATTTTATGTTCTCGTGGTCTCCAGACTTCGTTCTTCCGAGGACACATGGCAAGACCGGTCTCCACTCCACAAGTACGCAAGTCCGTTCTCAGCGTTCTTGGAATTATGAAACAGCGAGCTTCTCCTCTTTGCTGTGGTGTAGAGTCCCTGGATTAACGTTACAGGTAGGTGGCGATAATGCACAAGATCAAGTGCGATCCGCCAAAAACGGAAGAAGAAGAAGAAGAAGAAAAGAAAGAGGAAAGCAACCTGGCTGTGAGACATGAACAGAATTAGTACTTTCAAACTCATTAGATGCATCTTTAGAAAATGTTTGTCTCCACGAATTTGTAGAGATATATATCACCGATATTACTGCACAGAGTCCAGTTCTCACGGTACTGGTCTCAGCAGAATCATGCAGCTAAAAAGTAAACTAACAAATGGTCCCAGTTTTCAGGATTTCATCATGAGTTCTGATAAAAGCGATTTTGACGGCAGTGAGGAATA[T/A]GAGGAGCACTATATTCCTAAATACATGTCAGACCATTCACGGAAAGGTCAGATTTTTTTTTTCAGTGGATAGACATGATAGTACTAATGGAAATAATTTTTATTTGTTTTCAAACGAAATAATCATAAAACTACACCACCAAATATTTTGTATCACTTTTTTTTTGCATTATGTCTGACAACTAAATCAGTATTGTTATATAAAAAAATAAGGTGTTGTGTATGTATGCATGATGTGTTTGTTAGTATGTTATTTTAATTATTAGAAAATGACATTAATCAGTATTAGGGGTTTTGTGTATTTTTAAATTAGGGCTGTATTATATTGGAAAAATGTAACATTGCAATATTTTTATACTGTGATATATATATCGATATGAATACAATTTCAACTGATGACTTGAATATATCTGCTTATCACATATTTCTATCATATTTAGTAGGAGTGCTTCAGCATGAAATTTAAAACAACCTACAAGCATAGATAAATACAAAACAAGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa35053

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000104111	Essential Splice Site	505	577	11	13

Genomic Location (Zv9):

Chromosome 11 (position 15929987)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	15433202
GRCz11	11	15567837

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGTCAACATGACTCTTATCGGCAACACACAGCTTGTATTGGTAGAGGGAG[T/C]GAGTATAGCATCATACTTAATGAAGTTTTGCATATTTTTCGTCATTGCTT

Long Flanking Sequence:

TTATTATATGTATATATTGTAATGGTGTAATGTCTCGCTGTGTTTTTAAAAATAGCGGTTTCTTTGTTTTCATTTTCCTACTTCTGCAAGTGACGAATCCCTGTAAGCTAATAGCGTTCAGCTGCATGTCTAGCTCCGACTTTATTGCCCTTTTATCATGCTAGGTACGCTTTTCAAAAGGAAACCAAAAAGGTAACCAAAAAGTTCGCTTTTAGGTACCCTTTGACAGTGGAAATGGCCATAAAAGCATACTGAACCGTACTGTACTGTACCTTACCACTCAGTGGAAATGGACCATAAGCAACAAAATTTAATGAAATCGATAATGTGGCTTTTTTCTCATTTCTAGAAAACCCATGCATATCATCGGTTGGAAGATAATGTTCCTGCACCAGTGAAAAAGCGCCGTCTGGAAGAACTTATCTCTGTTTTTAGAGAAAAGGCAACTAAAGTCAACATGACTCTTATCGGCAACACACAGCTTGTATTGGTAGAGGGAG[T/C]GAGTATAGCATCATACTTAATGAAGTTTTGCATATTTTTCGTCATTGCTTGTAGTGTTTGTTAGGGATAACAAGCTAAACAGTTAACCACAACATGTTCACATTCTTAAAAAAGCTTTCAGGCTTTCAATTTTTTTAATAGTTTATTTTAGTATTATTTTCACTTAAAAATTTCATACTATGTTTAACAAAAAAAAGAATGTCATAAACAACATGAGTGTGAGAAATGATGAAAGTATGATGGTGTGTAGCAGATGATTTCCATTGTTATCATGAATGCATACTAAGAACTAGAATGTTTCTCACATAGACTTGTTGAAACTTACATTTATCTATTTATTTATTTACTTACTTTTACATGTATTTATTTAGCAGACACTTTTGCTCAAATCAACTAAGGAATGAGGATAATAGAAGCACTTCAAATCACCAGAAAGTAACAATGTATAGATGTACTGACAAGTCTATTTAACAGTTATTTATATATTAGATATAAATGTC

Associated Phenotype:

Not determined