ZMP
ptp4a1
Ensembl ID:
ZFIN ID:
Description:
protein tyrosine phosphatase type IVA 1 [Source:RefSeq peptide;Acc:NP_001007776]
Human Orthologue:
PTP4A1
Human Description:
protein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:9634]
Mouse Orthologue:
Ptp4a1
Mouse Description:
protein tyrosine phosphatase 4a1 Gene [Source:MGI Symbol;Acc:MGI:1277096]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35037 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa35037
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000026814 | Nonsense | 161 | 173 | 6 | 6 |
| ENSDART00000129843 | Nonsense | 172 | 269 | 6 | 8 |
Genomic Location (Zv9):
Chromosome 11 (position 11395435)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 11290438 |
| GRCz11 | 11 | 11274059 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCAGCTTTTCTACCTGGAAAAATATCGTCCCAAAATGCGTCTTCGATTC[A/T]AGGATTCCAACGGACATCGCACCAACTGCTGCATTCAGTAAAAGATTGCG
Long Flanking Sequence:
CACTAATGGACCAGATCAAACTAGATAACATTGCATAATTAATTTAATAATTACAGTAATCAAATTGCAGTACTGTTAATGCTAGAATCTGATCTCGCCTTTAAAATAATCAATAAATATAACAGATGTGAGATATTTGAATACTGAACACAAATCTAAGCTGTTTGCAACATATTGTGCAGTTACATGAATATGCCTGCATTATTACCTTTTTTCTTGATGTAAGCAGGGAATATTACATCACTAGATGATGTGACTGACCAATCAGAATCAAGTATTCCAGAGATGTCTGTAGTAATTTAGTCATTTTAATGTGTCAGCTCATTCATCATATATTAAACAACTAATATATTATTGTGCACAATACATGATATAGCATGATATATCCATTTTAATAAATATGATTTCTTTTTTTCGCCCTCAGAAAGCGGCGTGGAGCATTTAACAGCAAGCAGCTTTTCTACCTGGAAAAATATCGTCCCAAAATGCGTCTTCGATTC[A/T]AGGATTCCAACGGACATCGCACCAACTGCTGCATTCAGTAAAAGATTGCGCATCAGCTTTTCTCAAATGTTTAATGAGAATTTGTATCTAGCATAAGAAATATGTTCTCTTAATTGGTAAATGTGAAACTAAAATGAAGCTTCTTTCATAGTGTCCCATTCCCTCCTCTTCATTTCTGTATTTCCTGTGGAGAACCTCTGTCAGCAAGGTGAAGTGCTTGTTTGATGAACATGAGCTTAGTGTTTTGCGAGGAAGTCGGTTGGTGAACATGGTCAAATCCCGCCTCTGCCAAACTCGTAGTATGCTTTATTGTCTAAATGGTTTAAATATTTACATTTATTGCATTTCTTTTTTGTTCTTGATGATTTGTTTATTTGTACAAAATGCCTGCCTCCAAAAAGATCTAAAATAAATGCCTTATCACAGCAGAAAGACACCGTCTGGTGGAGGAGTTCTCAATGGCATTTGGAGAGGGTTCTTGATGTCTTTTGCAGAAAAAA
Associated Phenotype:
Not determined