ZMP
tmem38a
Ensembl ID:
ZFIN ID:
Description:
Trimeric intracellular cation channel type A [Source:UniProtKB/Swiss-Prot;Acc:Q6P2T0]
Human Orthologue:
TMEM38A
Human Description:
transmembrane protein 38A [Source:HGNC Symbol;Acc:28462]
Mouse Orthologue:
Tmem38a
Mouse Description:
transmembrane protein 38A Gene [Source:MGI Symbol;Acc:MGI:1921416]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35020 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa35020
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000035560 | Nonsense | 208 | 295 | 5 | 6 |
Genomic Location (Zv9):
Chromosome 11 (position 7359963)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 7165389 |
| GRCz11 | 11 | 7175228 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTATGGAGCCATTTTATTCACTCTCCAGGAGGCTCACGTGCTCCCTGTGT[C/A]GAAGAGCACACTCATCTGCCTCTTCACACTTTTCATGGTCTCATCCAAGG
Long Flanking Sequence:
GGAGAGTAACATAAATATGAACACCACACAAGGGTTAAATAGGAAAATGATCTAAACTCTTTGGTCATTTTTGAGCGAGATGCTAATGGTCTAATGCATTTAATTGACTTATGCTAAGCTAAGCTAAAATTGCTCCTAGGGATCGACTAAATGGATTCAAAAATGGTAAAACTGTAGATGACCTGTTAAATGTGCCTATTTCCAAAGAAGTGGAGTGTTTCTCTTAGGAGAGGTGTGTGAAAGTCACACCTCATAGTGACTATGTCGGGTTAAATTTTATAAATAGAAGAAAATTCCATTAAAAAGTAGCATAAAGGTATAGTCCACATGACATTTCTTTTTTTTAAAGTCGCATTTCATGAAAGAGCTGTTATATTTTATATGAATGATTTCTGTAAACAATAAGACTGTGATTCTTCTTTTTTTTTTTAGCCCTACCAAGGCCAGTCTGTATGGAGCCATTTTATTCACTCTCCAGGAGGCTCACGTGCTCCCTGTGT[C/A]GAAGAGCACACTCATCTGCCTCTTCACACTTTTCATGGTCTCATCCAAGGTAATACTCAGCGTAACAGTGGCATGTAAAAACAGAAAACTGGCCATTCATACCTTAATATAGTGGGGTTTCCATCATGAAGGGAATTAGGGCTGCACAATATATTGTTTCGGCATCGATATTGCAATGGGTGTGTCCGCAATAGTCACATAACAGGATCTGCAATGTTGAGATGGGATAGATGACCAAATTAATGAAAGTTTATAATCTGCATGTATTATTAAGGCATGTGATCAGAGGTGTGAACCTACACTAGTCTCACGGTTCGGTTCGGTTACGATTATCATGCCATCGATTTGGTTCAATTCGATATTTCGGTGCATCACGGTGCATTGACGGTGCTTTCCATACACAGTTTTATATTTTCTTCACAGCAGCATTTCTTGTATTAAAATGTATGAATATATTTATATTTAAATACTATTTGTAATATAATTTTGTAATTTAATAC
Associated Phenotype:
Not determined