ZMP

tuba2

Ensembl ID:

ENSDARG00000045014

ZFIN ID:

ZDB-GENE-040426-1970

Description:

tubulin alpha-1D chain [Source:RefSeq peptide;Acc:NP_998195]

Human Orthologue:

TUBA1C

Human Description:

tubulin, alpha 1c [Source:HGNC Symbol;Acc:20768]

Mouse Orthologue:

Tuba1c

Mouse Description:

tubulin, alpha 1C Gene [Source:MGI Symbol;Acc:MGI:1095409]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa35006	Nonsense	Mutation detected in F1 DNA	Not yet available
sa9405	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa35006

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000066177	Nonsense	210	451	4	4

Genomic Location (Zv9):

Chromosome 11 (position 3319875)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	3271130
GRCz11	11	3339290

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACCCTGGAGCACTCGGACTGTGCTTTCATGGTGGACAACGAGGCCATCTA[C/A]GACATCTGCCGCAGAAACCTGGACATCGACCGCCCAACATACACCAACCT

Long Flanking Sequence:

CAATTATAATAGCTTCACAACAATCATGTACCCAGTTATGTTGTCTTGGTAATGTCAAGTTGTCATAACAAAGTTATCTCAAGCAATCTTACCTTTGTATTTACAATTACGTAACTATTCATGTCATGATTATAAAGGTCTCGTGACAGTTTTATGAACACCCCTTCAAGTCTAATTACTGTATTTTTGTTTACATCGTGACTTATGTGATTCATATACATTACTTCCGTTCTCTGTTCTTCAAAGGCCGACCAGTGCACTGGACTCCAAGGCTTCTTGGTTTTCCACAGCTTTGGAGGAGGAACCGGTTCCGGCTTCACCTCTTTACTGATGGAGCGCCTCTCTGTCGACTATGGCAAGAAATCCAAGCTGGAGTTCTCCATCTATCCGGCTCCGCAGGTGTCTACAGCAGTGGTGGAGCCCTACAACTCCATCCTCACCACCCACACCACCCTGGAGCACTCGGACTGTGCTTTCATGGTGGACAACGAGGCCATCTA[C/A]GACATCTGCCGCAGAAACCTGGACATCGACCGCCCAACATACACCAACCTCAACAGGCTAATAAGCCAAATCGTGTCTTCAATCACAGCTTCCTTGAGATTCGATGGCGCGCTCAATGTTGACCTCACAGAGTTCCAGACCAACTTGGTGCCATATCCACGTATTCATTTCCCACTGGCGACGTATGCTCCAGTGATTTCTGCTGAGAAAGCATGCCACGAGCAGCTTTCAGTGTCTGAGATCACTAATGCATGCTTTGAGCCGGCTAATCAGATGGTGAAATGTGACCCGCGCCATGGTAAATACATGGCCTGCTGTCTTCTGTACCGCGGAGATGTCGTACCCAAAGATGTAAATGTTGCTATCGCCGCAATCAAGACCAAGCGCAGTATTCAATTTGTGGACTGGTGTCCGACTGGTTTCAAGGTTGGCATCAATTATCAGCCTCCCACTGTTGTCCCGGGTGGAGATTTGGCAAGAGTTCAGCGTGCCGTCTGCAT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa9405

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000066177	Nonsense	378	451	4	4

Genomic Location (Zv9):

Chromosome 11 (position 3319372)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	3270627
GRCz11	11	3338787

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TGTTGTCCCGGGTGGAGATTTGGCRAGAGTTCAGCGTGCCGTCTGCATGT[T/A]GAGCAACACCACTGCTATTGCCGAAGCCTGGGCTAGGCTTGATCACAAGT

Long Flanking Sequence:

CATCTGCCGCAGAAACCTGGACATCGACCGCCCAACATACACCAACCTCAACAGGCTAATAAGCCAAATCGTGTCTTCAATCACAGCTTCCTTGAGATTCGATGGCGCGCTCAATGTTGACCTCACAGAGTTCCAGACCAACTTGGTGCCATATCCACGTATTCATTTCCCACTGGCGACGTATGCTCCAGTGATTTCTGCTGAGAAAGCATGCCACGAGCAGCTTTCAGTGTCTGAGATCACTAATGCATGCTTTGAGCCGGCTAATCAGATGGTGAAATGTGACCCGCGCCATGGTAAATACATGGCCTGCTGTCTTCTGTACCGCGGAGATGTCGTACCCAAAGATGTAAATGTTGCTATCGCCGCAATCAAGACCAAGCGCAGTATTCAATTTGTGGACTGGTGTCCGACTGGTTTCAAGGTTGGCATCAATTATCAGCCTCCCACTGTTGTCCCGGGTGGAGATTTGGCAAGAGTTCAGCGTGCCGTCTGCATGT[T/A]GAGCAACACCACTGCTATTGCCGAAGCCTGGGCTAGGCTTGATCACAAGTTTGACCTGATGTATGCTAAACGTGCCTTTGTGCACTGGTACGTAGGTGAAGGAATGGAGGAGGGCGAGTTCTCGGAGGCCAGAGAGGACATGGCTGCTTTGGAGAAAGATTACGAGGAAGTCGGTGTAGATTCAGTGGAAGGAGAAGGAGAAGAGGAAGGTGAGGAGTATTAGATTTGGTCCACTTCTCTGTGGAATAAACAGGGTTCCCACGCTTCTTGAAGGTCTCATTGAAATTAAAAAGAACGTTTTTTTTAGATGTTAGTAACAGTATTGTTAATTTTAGGGATATTTATAGGCTAGTGCGCTCCAAAATTTGTGATTATAAAAAAACAATATAAACAGGTAAAACTTGGTGTTTGTCACTTTCACCCAAATGGATTAAGGATTTATTCTGACATCGCCTCATGCTTCAGTTCCTTAAATCTTCTGACCAATAAAATGCTCTTAA

Associated Phenotype:

Not determined