ZMP
hoxc11b
Ensembl ID:
ZFIN ID:
Description:
Homeobox c11b [Source:UniProtKB/TrEMBL;Acc:Q4PR81]
Human Orthologue:
HOXC11
Human Description:
homeobox C11 [Source:HGNC Symbol;Acc:5123]
Mouse Orthologue:
Hoxc11
Mouse Description:
homeobox C11 Gene [Source:MGI Symbol;Acc:MGI:96193]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35003 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa35003
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111698 | Nonsense | 269 | 306 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 11 (position 2171676)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 2124129 |
| GRCz11 | 11 | 2181607 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATTCTTCTTTAACGTTTACATCAACAAGGAGAAACGGCTTCAGCTCTCC[A/T]GAATATTAAACCTTACTGACCGACAGGTCAAAATTTGGTTTCAGAACAGA
Long Flanking Sequence:
AACCAGTTTAAGTAAAACCCATCAAGCAAATATACCTAATCAGAATGTTTTACCAATTACAGAGCATCATTTGCATATCTTTTTTTATTTAGAACTTTACCAACCAAATCCAATGGTGTATTTTTTATTAATTTAGTATTTGCTATGTACATAGGCTATTTAATTTACTTAACATGCATTTTACGGATAAATAGAATGTAACAATAACAAACAGCCTCCATATGCGGTTATATTACTATTATTATAATTTACCAAGGTACACTTGTTAAAGTAGCTATTGGGTAGCGCGAGACGTACAATAATGGGAAAAATAAAAACAATATTAACTGATGATGTTCATGTGGCGATTTTTGACTGTTTTCTCATTTGTTTATTTGTTCTAAGCTACTCCGCGAATGAGGAAGAAGCGATGTCCATACACCAAGTTTCAGATCCGAGAACTCGAGCGAGAATTCTTCTTTAACGTTTACATCAACAAGGAGAAACGGCTTCAGCTCTCC[A/T]GAATATTAAACCTTACTGACCGACAGGTCAAAATTTGGTTTCAGAACAGACGAATGAAGGAAAAGAAGTTAAGCCGAGATCGCCTACACTATTTCTCTGGAAACCCGCTGATGTGAACTGTGAACATTTCTCCGAGGGACAAGAAGTATGTTATTTCTGAAAGGAAATTAAACCGATTTTGTTTTCAGACAATAATGGCATGTGTACTGAAGTGGATATTCTCAGAAAGAGACTGGCGTGAGGGAAAAAATTAAAACTGTCATTTTTGAAAAATCATTTTTTGTTTCAATGAGAAGATCCTCAGTATTTAACCTCCATTATTATTACTATTATCACTATTATAATTATTACTGTATTGATCAAAAAACTGTTTGAAAACACAGGAATATTGTAATCTTACATCAACATGCTATGCAATTAAAACCAATATTCCAAAATAGGGGCTGTGGTTCGTGTATATTTGTATTTACTTGAGCTGACTGTTTTGCCGGTGCGACAAC
Associated Phenotype:
Not determined