ZMP
si:ch211-263p13.4
Ensembl ID:
ZFIN ID:
Human Orthologue:
MCF2
Human Description:
MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:6940]
Mouse Orthologue:
Mcf2
Mouse Description:
mcf.2 transforming sequence Gene [Source:MGI Symbol;Acc:MGI:96932]
Alleles
There are 7 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34921 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa34920 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa21751 | Essential Splice Site | Available for shipment | Available now |
| sa21750 | Nonsense | Available for shipment | Available now |
| sa2543 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa34921
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089389 | Nonsense | 78 | 994 | 2 | 27 |
| ENSDART00000141955 | Nonsense | 95 | 798 | 3 | 20 |
| ENSDART00000146666 | None | None | 104 | None | 4 |
Genomic Location (Zv9):
Chromosome 10 (position 27426447)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 26829241 |
| GRCz11 | 10 | 26790954 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGAGTTTGGTGGGAGTCTGGAGCAATGCCACAGTGACTGGATTGTCCTA[C/T]GAACCGTAAAGCAGCATATTGTTTTCATGCAGGAAAAAATTAACAAAAAA
Long Flanking Sequence:
TTCCCTGGACATCTGCACTTGGTTCTAGTGGTGAGACCCAAAACTCACCCGCAGACAACTGGAACAGACCTCGGATTCAGATTCAGTCAGGACGACTTTGCTCTCAAGATGCCGGTAAGAGAAAATAAATATGAAAATGTTTACTACAATTACTAAAATTACTTTATAGTGATTAGATGTGAGCTAAATCATAGGCCAGTCACTGCCTGATTATGTAGGAAAACATTTAATAGCTTATATTGTTTGTTAAACAATAATTAGGCCATTAATAAGCCTTAATAGTTAGTTCACTAATCAAATGCATTATGCATACTTAATTTTATTGAAATTATTTTTCATTACACATACCAGGCCTAATTAATTCTCTGCTCCTCTTCTGCTTCATTCAGATGATAATGCTGAGCTCTCTGTCGGACCTGCTTCGCTTCATTGATGAAAACCAACTGAGCACTGAGTTTGGTGGGAGTCTGGAGCAATGCCACAGTGACTGGATTGTCCTA[C/T]GAACCGTAAAGCAGCATATTGTTTTCATGCAGGAAAAAATTAACAAAAAATTGCATAATGGAATTATATTGAATCAAACTGTTGTATTGTATGCTTCACTGTTTGATGCAGATGAGAAACAAACATATCTAATCTCTTATTTAATGATATCAGTTTATTTCCTGTTCATTGTGATGTCATGTGAGTGTCATTTTAGGATGCTTCGACCTACAGTTGGAGGAAATGCTGAGTAATGCATAATGTCTGTGTGTGCTGCCACCTGCAGGCCATAGAGAGTTTTGCTGTAACCGTGAAGGAAATCGCTCAGCTCCTGCAGACCTTCGGCACAGAGCTGTCCGAGATTGAGCTGCCGGATGACGCCAGCGGCATTGAGTACTTACTCAGATCACACACTGAAAAATACAGACAGATGAAGGTATGGACAAATGTGTATTATAAGCTGAACAGATGTTTTTATATAATAAGGTCTCTTTATATAATATAATAAATAATTATTGCTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34920
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089389 | Essential Splice Site | 171 | 994 | 4 | 27 |
| ENSDART00000141955 | Essential Splice Site | 188 | 798 | 5 | 20 |
| ENSDART00000146666 | None | None | 104 | None | 4 |
Genomic Location (Zv9):
Chromosome 10 (position 27424011)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 26826805 |
| GRCz11 | 10 | 26788518 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGCAGCAGAAGACAGAGACATCAGCCAAGACAAAGAAAGAGTGCAGAG[G/A]TACTGTACACTCAGCAATACTCAATAAAACATCAGCTCTTTTAGGTTAAG
Long Flanking Sequence:
AAGGGTACATATCAGTACATAAAAAGTACAAAAGAGTTTCTTTTAAAATTTGTAGGTACTAATATATACCTTTGAGGTAACAATATGGACACTAAAAGTACAAGTGTGTAACTTTTTAATAGGTACCACCCCGTGAAAGCTCACATACCTTTATTTCTGAGAGTGTAGTTATACGCTTGCTCATGCTAGTTAAAGTGAATTAAAGTTAAGAAATGAGTCCGTATTATAATGTATGCAAAAATTATCAATACAATAGTAGGAATGATTGCCACAACACAATGTCTCACCACCAAATAATAAGTCTTGTTTAAAAAAAGACTTATACCCCAATATACATGTCATAAGTAGAGACATATGTTTTGAAAACTATTACAGGATGACATCAGGTCGGTTATGAGAGAAGGAAGGCAGCTGCTCTCAAATCTGGAGGCTTCAAAAGCAGTGGAAGGAGCTGCAGCAGAAGACAGAGACATCAGCCAAGACAAAGAAAGAGTGCAGAG[G/A]TACTGTACACTCAGCAATACTCAATAAAACATCAGCTCTTTTAGGTTAAGCTCAGTAACTCTCCAATTAAGGAGCCTTTATATGATTTCTCTTTTAATTTTATGCTCCGTTATTTGAATGAGTATCCAACCAGCTATTTATCACAATAATCTTCCACTAATAAATCATAAATCATGTTTATTTGTTTCTATCAGGCTCGTGGCACAGTTACGGGACATGGAGATGGCTTTTGATGGCTTTTTTGAGAAGCACCACCTCAAGCTCCAGCAATACCTTCAGCTGCTCCAATACGAGCTCAGCTTCCATGAGGTATGAGCCAGTGTTTGTGAACTAAAAGTGTGAAAATAACAGTAGGTTTCTTTAAAACACTGCTTTCCTGGTAATAATACATTTCGTCTTGAATCCCTAAGCATTTATGCTGACATTTAAGACACACAATTGCTTTTATGTCTGATATTTTGCTATTTTGCTGGGCTACGCGTAACTGTTAAATGTGATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21751
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089389 | Essential Splice Site | 600 | 994 | 15 | 27 |
| ENSDART00000141955 | Essential Splice Site | 594 | 798 | 15 | 20 |
| ENSDART00000146666 | None | None | 104 | None | 4 |
Genomic Location (Zv9):
Chromosome 10 (position 27413025)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 26815819 |
| GRCz11 | 10 | 26777532 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCGCTCAGATGCCCTCTGGAGGCAGTGTTCAGATTCAGCCTTCATCCAG[G/A]TATTACAGTGTGTATTTTTGTTTTTATCACACAATAACAGCTGATTGACA
Long Flanking Sequence:
AATGGACAACCCGGCTCTCTCTAATATACTGCCATCTGTACTGCGAAACAAGAAAGAAGATCTGTTTGGAAATCTGCCGGAGATCTATAAATTCCACAGCAGGTGAGAAATGTGCCCACAACCCTCCAATACACACACACACACACACACACATTTGTGCACACATTCACGCATTCATGCTGACTTTGCTTTGTTGCGCAGGATATTCTTGCAGGACCTCGAGAGCTGCTTAGAGACCCCAGAGAGAGTGGGTGCAAGATTTCTGGAAAGGGTGAGCCAGCTGGATTTTTGAATATTTTCTGCCATAATTTTTAAGTACATTTCTTTTCATTGCATCACAACCGACATTCATTATTATTATTGGGTACTACTTAATACTTAATACCCTCTCATAATATTTTTGGCAGAAGGAACATTTTCAGGTTTATGAGCGCTACTGCCAGAACAAGCCTCGCTCAGATGCCCTCTGGAGGCAGTGTTCAGATTCAGCCTTCATCCAG[G/A]TATTACAGTGTGTATTTTTGTTTTTATCACACAATAACAGCTGATTGACATTATTACTAATCGGACAAGCAGATATTCATACTGATAGATGGTGATTGTTGGAATTTTTATTTTAGGACATTCAGAATATTTGTCTTTTTTTAACTGTTATTTAGCTAATTTGCTTCTACTTCTCTTATGCAGGAGTGTAAAGGGAAACTGGATCATAAATTGGGACTGGACTCATATTTGCTGAAACCCGTTCAACGTTTAACCAAATACCAGCTTCTTCTAAAGGTGCAAACATAAGAATAAACTAAGAGTTCATTTGCACAACAGAAAGAAACTATATAAACGAAATACCTTTTTATGCAAATCCACAAAAGCAACTATAAACTGTATAATGCCAGGCCAGTACATGGCGATATCACTTTATTATTATTATTTTTTAAATACTAACACACATACCTATAAACTTAACACTCAGCAGAGACAGTCATTTTGACCTTTTTTTAATATTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21750
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089389 | Nonsense | 708 | 994 | 18 | 27 |
| ENSDART00000141955 | Nonsense | 702 | 798 | 18 | 20 |
| ENSDART00000146666 | None | None | 104 | None | 4 |
Genomic Location (Zv9):
Chromosome 10 (position 27410174)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 26812968 |
| GRCz11 | 10 | 26774681 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGATCAACCACAAGAAAGGCCCAACACGCATGAAGGACATGGCACGCTTT[A/T]AACCAATGCAAAGGCACCTGTTTCTTCATGAAAGAGCTCTGCTTTTCTGC
Long Flanking Sequence:
CTTTTTCACAAAATCATATTTTCTAGTTTATGATGATAAAGGAACTGATCTACATAACCTGTTTTCAAAAGTTGCTGCTCGCCAAAAAAAGTTGTGTAAACGAACCACCAAAATGGCTAAAGATTTTAATTTTTAGTATGGTGTCCTAAATGGTTCCTGTATCTCTTACCAGGAACTACTGAAGCACAGCTCAAACTCTCAGTATGCATCTGAGCTGCAGGGGGCACTAAATGCCATGCTGGATCTCCTCAAGTCCGTCAATGACTCCATGCATCAGATTTCCATTACCGGTTATGAGGTGCGACCAACAAATAAAAAATAAAATAAATATAATAAAGTCAATAAAATATATTTCTGAAATATCTAAACCTGCTTTTCTAAATGTTCTTTGAATCTAGGGTGAACTGAGTGATTTGGGTCGCGTCCTTATGCAGGGGTCTTTCAACGTCTGGATCAACCACAAGAAAGGCCCAACACGCATGAAGGACATGGCACGCTTT[A/T]AACCAATGCAAAGGCACCTGTTTCTTCATGAAAGAGCTCTGCTTTTCTGCAAGAAGCGAGAGGAAACGGGAGAAGGACATGACCGGACAGCTTCTTACAGCTTCAAACACTGCCTGATGGTGAGAGAGAATGAGAGCCAACATTTAAAGTTCCAGTGAAATCAAAATTTGAGTTTTTGAGGTGTTATTATCATTATGTTAAAGTCTTAATGAGGAAGTTCACCCAAAACTAAAAATTTGTCTATCATTTACTCTGAGGTTTGAGGGTTTTTTCTGTTCAACACACAGTAACAAGTTATTTTGATGAATACTGGAAACTTGTATCCATCCATAGTATTTTTTCCTTACTATAAAAGTCAATGGTTACAGGTTTTCAGCTTTCTTCAAAAAAAAACTTTGTGTTGAAGAAGAAAGAAACTCATAAAGGTTTATAATCCCTTAAGAATAATGAATGAATACATAAGTAAATGGTGAGTAAATGTTCATTTTTGGGTGAACAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2543
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089389 | Essential Splice Site | 778 | 994 | 19 | 27 |
| ENSDART00000141955 | Essential Splice Site | 772 | 798 | 19 | 20 |
| ENSDART00000146666 | None | None | 104 | None | 4 |
Genomic Location (Zv9):
Chromosome 10 (position 27408021)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 26810815 |
| GRCz11 | 10 | 26772528 |
KASP Assay ID:
554-2440.1 (used for ordering genotyping assays)
KASP Sequence:
AGAAGTTTGAGATTTGGTACAATGGAAAAGAGGAGGTGTATGTTGTTCAG[G/A]TGAGTCATTTTAGCAAGGTTAAACCTCCACAGAGTGCAATGCATGAAAAG
Long Flanking Sequence:
CGCAAAAAAACAACAAAAATTTTTTTTCTATCACTACTATACTAAACTATCAGTTTTTTTTTCTTCCACCAATTTTTTTCCCTACCATCACATCCCTTCCGGGTCTCCGTAACAACCATACCTGTTTTTGTCCAAATAAGCATATTTTTTTAAATCCGGTTGTTCATTTGTATCTAAACCAACCAACTTTGTTATGATTTTTAATTTTTTTTTTACATGTAGAAGTTGTTTATGCACCTATTTGTTTATTGCAGCCCTATTTTAAGTGTGCTCAAAGAGATTGATATTTTGATGAAAAGGGTTTTTATGCTCTACTCAAATTCCACTGGCAGTTAAAAACCCAGAAGGCTATTAAAATGCAGCAATTATGAATGTGAGATCTTTGACATCTCTGGTGTCATTTGCAGATGAGTGCGGTCGGTATCACAGAAAACGTCAAAGGGGATGTAAAGAAGTTTGAGATTTGGTACAATGGAAAAGAGGAGGTGTATGTTGTTCAG[G/A]TGAGTCATTTTAGCAAGGTTAAACCTCCACAGAGTGCAATGCATGAAAAGTTTGGAGTGCCTCTGTCATCGCTTATTAACGCCTCTTCACTGCTTAGAACTCAGAAATTGCTTGTTCACAGTCAATGCTGATGCAAAATCCTGAACACAGATTTGTTTGTAGATTTTGCAGAAAGGAAAATACGCAAGTTTTTAAAGTTTTTTATGAGTTTTTTTTTTATGAGATAAGGTATATATACATTTAAGGTGAGAATTATTAGCTCCCCTTTGATTTTTTTTGTCTTTTTTTAATTTTTTATTTTAAATATTTACAAAATGATGTTTAACAGAGCAAGGAAATTTTCAAAGTATGTCTGTTAATATTTTTTCTTTTCGAGAAAGTCTTATTTGTTTTATTACAGCCAGAACAAAAGCAGTTTTAAATTTTTTAAACACCATTTTAAGGTCAATCAAATTTATAAAGATTTGTGGAACATCTTATCATCCTTAGATGTTGCTCAT
Associated Phenotype:
Not determined