Busch Lab

ZMP

zgc:152845

Ensembl ID:
ENSDARG00000044282
ZFIN IDs:
ZDB-GENE-040426-1624, ZDB-GENE-061013-288
Description:
structural maintenance of chromosomes protein 5 [Source:RefSeq peptide;Acc:NP_001180470]
Human Orthologue:
SMC5
Human Description:
structural maintenance of chromosomes 5 [Source:HGNC Symbol;Acc:20465]
Mouse Orthologue:
Smc5
Mouse Description:
structural maintenance of chromosomes 5 Gene [Source:MGI Symbol;Acc:MGI:2385088]

Alleles

There is 1 allele of this gene:

Allele Name Consequence Status Availability
sa34865 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa34865
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065017 None None 400 None 19
ENSDART00000101191 None None 697 None 16
ENSDART00000122170 Nonsense 572 1073 13 24
ENSDART00000138389 None None 445 None 10

The following transcripts of ENSDARG00000044282 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 10 (position 15663418)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 15676725
GRCz11 10 15634844
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCGAGAGATGTTTGATGCTCCTGAGGAGGTTATGAGTTATTTATGCCAT[C/T]AGTACAGAGTTAACGATGTACCAATAGGAACAGAGAAGACCAAGGGCATG
Long Flanking Sequence:
TTCAAAAGTTTTTAAAAATGTCTTCAAATAATTTTTGCATTTTGATGAGATTTTAATTTATATTATCTGCTGTAACAGAAAGCCATTTTAGTCTCCTCTAAGTCATGGTAAAAGCGTTGTTTTTTTTTTTTTAACTTTTGTTATTATTTTGCTTCTTGCAAAAACCCTTTTGTTATTGACTCGCATTAAAAAATGAAAAGTAAATTATGTAAAACGAGGCATGTTTTTTTTTTTATTTTTTTTTTTTTAGATGAGAGATACGCAGAGGCTGCGAGTTAACAGCATCATCGCTCCTACAGAGTCTTGCTCTAAACGACCACCGTCACGACCCATCGAGACCCTCAAGTAATGAGCATCATTAAATGTCTTTTTTTTTTACTACATTTAGAGTTTATGTGTTTAATGTTTTTTTTATTATTTTTTGCAGGCCTTACGGCTTCATCTCGTACTTGCGAGAGATGTTTGATGCTCCTGAGGAGGTTATGAGTTATTTATGCCAT[C/T]AGTACAGAGTTAACGATGTACCAATAGGAACAGAGAAGACCAAGGGCATGATTGAATCGGTTGGTTCTCCTTTGATAAAAAAGTGATGTATAGCTGAAAGCAGAGTAATATACTTTAAATTAATTCATTATGGTGGCGCAGAGGTGCCGTAGGTAGTGCTGTCGCCTCACAGCAAGAAGGTCGCTGGTTCGAGCCTCGGCTGGGTCAGTTGGCGTTTCTGAACGGAGTTTGCATGTTTTCCCTGCATTCGTGTGGGTTTCTTCCGGGTGCTCTGGTTTCCCCCACAGTCCAAAGACACAGGGGTGATAGCGTTCCGGCACCACGCCGGATTTCCGGCGTACTGTGGCTGCGGGGAAAAAAAAATCAGGTTCACGGATATTGATCTGTCATTTCTCTAGATTCACAGAATTCACTCACTGCTACTGATTAATTGTGTAATTTAGAGAGCTTTATAAATTTTAACAGATCTTTGTGAGATCTCTATGAACTAAGATTAGTGA
Associated Phenotype:
Not determined