ZMP
im:6906849
Ensembl ID:
ZFIN IDs:
Description:
Im:6906849 protein [Source:UniProtKB/TrEMBL;Acc:Q6DGC5]
Human Orthologue:
RAD50
Human Description:
RAD50 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:9816]
Mouse Orthologue:
Rad50
Mouse Description:
RAD50 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:109292]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa27506 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa41557 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa34791 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa34790 | Nonsense | Available for shipment | Available now |
| sa34789 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa34788 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa27506
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075927 | None | None | 1312 | None | 25 |
| ENSDART00000121721 | Essential Splice Site | None | 409 | 1 | 11 |
Genomic Location (Zv9):
Chromosome 9 (position 56447729)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 54861119 |
| GRCz11 | 9 | 54361243 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCGGAAGCACGTCAGTGCGCCGACGCGGGAAACACACGTCTTGGTTCATG[T/G]AAGTCCTGTAAGCTTGAGTTCAAGGGAAACTTGCTTCATTGTTTTTTGTG
Long Flanking Sequence:
GACAGGGTTGACAGAATTTGAGGATTGTTTACTGTTTTTCTGTTTGCAGATTATTTGCAAAAAGTGCAGGAGCTTGACCAACATTCATTTCCTACAGCCTATGGTCATGATAAAAGTAATGTGGTTAAATAAAAAAAAAATGAAACTTTTTTTGATGTCTCAAAGGCACTTTTATAGTGAAAATTAACTGTAGATCTAAAATACGGGAAATGAGTGGAATCAGTTTCAGTATGTTTTTGCCCTAACGTTAATTATAAATGGAACCACTTTTTATTTAAATTAATTTAAAATTAGTAATACATATTAATAAAATAATTACATGTCACGTAGACTACTCGTTGTTGAAATGTCGAATCACAGAGCACAAAAGCATACGTTTTATTTATTTATTTTTTTTGTCTGAGTTCTGGGGTTTGTAGTTTCTAGATGCCTTTCGTCAAGAAGTTGTATGCGGAAGCACGTCAGTGCGCCGACGCGGGAAACACACGTCTTGGTTCATG[T/G]AAGTCCTGTAAGCTTGAGTTCAAGGGAAACTTGCTTCATTGTTTTTTGTGAGTTAACGTTACTCTAAGAAAATGTAAAGGTGTTTTGCATCCGCGTTAATATATGTATTGATTTGCTTGCTCAACTGCACTTTATAAAATGAGTGTGTTACGAATATAAGTATACCCCTTTTCATACTGATTGTACAGTCTAACGTTAATCACTTATGTCAGTGATCATATAATATCTGTATAGAGGTAAAGTTGGTTTTATATTCAGATATTCTCCTTAATAATATGATTTGAGAAAAGTATTCTGTCCAAATTCTAAATAGGGAAATCATATTAGCATCAATGATTATCAAAGTAACTTTACAACCATGTTTACAGTCCGTTAGATAGTGCTAATGTTGTTTTAAAGTCATACTTGCATGCTAATTCTGACCGAATATTAAAATTAGGGTGGTAAAAACAATATAGAGACAGTTAACTTACATGAACGAATGTGAAAATATAAAACCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41557
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075927 | Nonsense | 385 | 1312 | 8 | 25 |
| ENSDART00000121721 | Nonsense | 385 | 409 | 9 | 11 |
Genomic Location (Zv9):
Chromosome 9 (position 56436301)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 54849691 |
| GRCz11 | 9 | 54349815 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACACCCAGGTAAAGACTTTGGCGTCTTTCCTGGAGTTGGAGGGCTATGAT[C/T]GAACGCCACTTAGTGAGCGACAACTCCAAAGCTTTTACAGACAAATCAAA
Long Flanking Sequence:
GACAACAATAGGCCAGGCGACATCTAATGTATATATAGCTATGCTGACAAACCTTTGCTGCATAAAATTTTGTTAACTTTTTTCTTTCTTTGAGCAATTATGGTAACATTTTAATAACTTGTATATAAATATATATAAATGCTTTTTGATTTTACCTGGAATGTTAAAATAGTTTACAGATTTTGAAAGCATTAAGCAGGTTAATAGAAGTCAGCAAAACTATAAGAAATTCTTGTGTACTTGTCCAGGAGTAAATAGCACAAACGATATATATGGCAACCTGCTGACCATTTCAAACCTCATGCTCATCAGCTTATTGTATTTTTATTTCTCATTTATTTAAGATGAACGTATTCTTTCTTAGAGCCGTTCTTCAATTTTTTTTCTGTTTGTTTAAAGGTCGTCTGCAGTTGGAGGCAGATAGACACACACAGAACATTAAAAAGAGAGACACCCAGGTAAAGACTTTGGCGTCTTTCCTGGAGTTGGAGGGCTATGAT[C/T]GAACGCCACTTAGTGAGCGACAACTCCAAAGCTTTTACAGACAAATCAAAGAAAGACTGGACCAGGACTCGGAAGCCCTCAACCAAACTATGGTAGATAATTGCATGACACTACATTTACCACCTTGTTTACACACACACACACACACACATTTGTTTTTGTGAAAAGTGGGTACATTACATAGGTTTCCATTCATTTTATACGGTCCAAACCGTATATTGTATTGCCCTCACCCCACCCTACCCCTAAACCCCACCATCACAGGAGACTGTGCAGCTTTACTCTCTGATTAAACTCATCCTGTGTGATTTATAAGCTTTTAGAGAAATGAGGACGTCACCAATGTCCTCATATTTCACCTCCTTTTTGTAATACCTGTGTCATACCCATGTCATTATACAGATTTGTGCCCTGATGTATCACAAAAACACGTACACACACACACACACACATACAGATACATATTTATATATAGGGGTGTAACGGTTCACAAAAATCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34791
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075927 | Nonsense | 562 | 1312 | 11 | 25 |
| ENSDART00000121721 | None | None | 409 | None | 11 |
Genomic Location (Zv9):
Chromosome 9 (position 56431873)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 54845263 |
| GRCz11 | 9 | 54345387 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATGGACAAAGAGGAGCAGGTGAGGAAGATCAAGTCGAGACATAATGAA[G/T]AGCTGGTGTCTCTGCTGGGACACTTTCCAAACAAGAAAGAGCTGGAGGAC
Long Flanking Sequence:
TATAAAACTGTGGCATACATCATGTGCATTAATCACACCATGGACATTACATTAGGATGCCTGCCTACCGGTTTAAAAAAAGCCCAGATTAAAAGAAGATGGCAAAATGAGAACTTTTCTGTCTTAAAATATAGTATAGAATTTTGATAAATTAAACCCCGTGAACACAGTAAATACAGGAATGGAGAAAAGAGCACTCATTTATAATGAGCTGTCAGTCAGCGCCCGCTCTACTTTTCAGGTCATTGCGTCTTTGCCATGTGCTGTGTAGATACAGACGGTTGGACAGTAATCACTTTTAAAAGATGATGTAAGCAGGTCAGCAAAAAAAAATGGATACAGTCACAAAATTGGAATTGACAATCAAGATCTGCAGTGTAAATGCAGCCTAAGATATCTAATCGTGTCTCTTAAGCAGTTTTCCAAAGTGACTGTCTTATTTTAAATTCCAGATGGACAAAGAGGAGCAGGTGAGGAAGATCAAGTCGAGACATAATGAA[G/T]AGCTGGTGTCTCTGCTGGGACACTTTCCAAACAAGAAAGAGCTGGAGGACTGGATCTACTCCAAATCCAGAGAGATCAAATCCACTAGAGAGCAGATCACCAAAATGAAGTCTGTGGCACATTTTAGCAATTTGTTTTTCAACAAACATTTGTATATGGACCCTTTTCACAAGATGTTTATGCAGCATATTATTTAACAGTCATCAGCATCTTAAATCCTTAAAAGTTTTTTTTAATATGTTCATTTCAAAAAATTTATGTACAGTGCATCTGGAAAGTATTCATAGCGCTTCACTTTTTCCACATTTTTTGTTACAGTCTTATTCCTAAATTGATTAAATTAATTGATTTCCTCAAAATTCTACACACAATATAATAATATAATGACTATGTGAAATTGTCTAAATTGAGCTCAGGTACATTCTGTTTCCACTGATCATTCTTGAGATGTTTCAGCAGCTTCATTGGAGTTCACCTGTGGTAAATTCAGTGGATTGGAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34790
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075927 | Nonsense | 606 | 1312 | 12 | 25 |
| ENSDART00000121721 | None | None | 409 | None | 11 |
Genomic Location (Zv9):
Chromosome 9 (position 56429077)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 54842467 |
| GRCz11 | 9 | 54342591 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAATTAACAATTTGTTTTGTTTTTGTAGTAAAGAGCTTGCATCTGGAGAA[C/T]AGAAGAAGAGTCATTACACTGCAGAAATCAAACGAAAAGAAGAGCAGCTG
Long Flanking Sequence:
GAAATAAGGAAGCTTGTTTTATTTATCAGCATTTTACATAGAGAAAATTCACTTTAATAGAGGTGTTGCTTATTGTTATTTTTTACTTCCATTTTGTTTTAAGGCTAAAATGGTAGAACTTGTACATTTATTTAAAAATAGAAGAAAAATCTTGAAACACTTTTTTTATTGCTCGTACAAATGTAGTAAAACCATCGACTGCATATTTCTCTACAATTGTAATATATTTTTATCACAATTTCACACAGTTTTCATTTTGAGGGTTTTCTTTTTTTGTTTGTTTGTTTGTTTCTGTAATAATTGTAATTTTTCTCACTTATAACCACAAACACCGAAATCAAAAGACCCTAAAACTAGGTCATCGTAGAATAAATGTATAGATTTTTGGTTTGTCTTGGATTTGTCATTCATAAACTGCTTCTGCGATCATTATCCACACGAAAAGGTTTGAAATTAACAATTTGTTTTGTTTTTGTAGTAAAGAGCTTGCATCTGGAGAA[C/T]AGAAGAAGAGTCATTACACTGCAGAAATCAAACGAAAAGAAGAGCAGCTGGCCAAATATGAAGAGAGACTTTTTAATGTTTGTGGAAGCCAGGATTTCCAGTCAGACTTAAGCAAACTGGAGGATGAGTTGGAAAAGTGCTCCAAACAGAGAGGTATGGAAAGCTTCTCACAAAGCATGTTACCCTGTGAGGAGTAATATTTTAAATTCAATACGAAACTTAACAGGCAGCCAGTGTAAGGAGGATAAAATTGGGGTGATATGATCATATTTTCTAGACCTGGTAAGAACTCTGGCTGCTGCATTTTGTACTAATTGAAGTTTGTTAATAGAGGACTATTACTATTGGAATGTGAAGAGACTTTCAACCAGCAACAAAAAATGTTTCTGAAGCAATCACGTACTGCACCTATAAGGTGCTCGATTTAAAATTCAAAGTGATTTTAAAAGTCCTTTATCTTACTATATGGGAGTGAAATTTGGGCACCGGTATTAAAATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34789
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075927 | Nonsense | 716 | 1312 | 13 | 25 |
| ENSDART00000121721 | None | None | 409 | None | 11 |
Genomic Location (Zv9):
Chromosome 9 (position 56426646)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 54840036 |
| GRCz11 | 9 | 54340160 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGACATGCAGTCCAAACTGCGGCTTGTCCCAGACAAGCTGAAGAATACG[G/T]AGCATGACTTGAAGAGGAAGGAGCGCAGACGTGATGAAATGATGACACTG
Long Flanking Sequence:
TTTACAGTGTCTGCTATAATGTAAATGTTAGTTTGTGTGTTTACATGGATGAATATGGCCACTGTGTAAATGCACAGTACAGTTACGATCTTATTGCCACAGTAGATCGTTATGATAATATAATATATGCCTTCAGAGATTTTCTGAAGATAAATACCAACAAATAAAGCAACTGGAATGACTACAGCAGTCACGATCGTCTGATCTCATATGAAGCAAGAGAACGCGATGACGTAGGATGAATGGGGATTTGGCATTAATGTTGGATTTTCTTCCATGTGATTGTTTTGTTCTTTTTCTCTGGCCTGGCTATTCTTTGTCCAGCCATGTTGGCAGGTGCCACAGCTGTGTACAGTCAGTTCATCAGTCAGCTGACGGAGGAAGGTGACCCATGCTGCCCCGTATGTCAGCGCGTGTTCCCATCAGAGGCGGAGCTCCAGGACGTCATTAATGACATGCAGTCCAAACTGCGGCTTGTCCCAGACAAGCTGAAGAATACG[G/T]AGCATGACTTGAAGAGGAAGGAGCGCAGACGTGATGAAATGATGACACTGAAGCCCATCAGGCAATGATCCATTTATTATTCTTTCATTGTTTAATCTATTTGTCAATTGGTTACTCCTTTAAACACGACATCGGATGCCCATTTTACACAGGCTTATTTGATTTTTTTTGGGTCTTTAATGTTCCTGACTTACTTTAATTGGATTTATTAATGGTAGTGGAAATCAACCCTGTTTTAGGGTATCGAAACACCTCAGTCCACATTGAGCTATTTTGTTTCATATTTCTTTACATTTAGTCATTTAGCAGACGCTTTTATCTAAATCGACTTACAAATGAGGACAAGGAAGCAATTTACACAACTATAAGAGCAACAATGAATAAGTGCTGTAGGCAAGTTTCAGGTGTGTAAAGTGTAAGAAGCAAAGCATTAGTAATGTAAGTACTGTTAGCGGTGGAGCCAGAGAGGCAATTGCAGATTAGGAAGTGAAGTGGAGACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34788
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075927 | Essential Splice Site | 1130 | 1312 | 21 | 25 |
| ENSDART00000121721 | None | None | 409 | None | 11 |
Genomic Location (Zv9):
Chromosome 9 (position 56415911)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 54829301 |
| GRCz11 | 9 | 54329425 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAGAGCTGGCCAATAAAGACCTGGACATCTACTATAAAGCCCTAGACCA[G/A]TAAGCTGATTTTATTATCAGGGGGTTTCTAATGGGTAGAGTCAGGTAGCG
Long Flanking Sequence:
AACTTAAGGTTCAAGAGCGCTGGCTGCAGGACAACTTGACTCTACGAAAGCGCGTGGAGGAGCTGAAAGAGGTGTCCAGAAAACGAGAGGCCTTAATTAAGGAAATGGGCAACATGCAAGTCCTGCAGCTGCGCAAGTATGAAATCATTTGTTAGCATGCAATAATTTAACACAGTTTGAATACTTTATATAACTTCCATCCCACTTAATTTTTTTTCTAATCATTTTAATGTGAACCTAAATTCATCTTTTAAAATGTATTTATTGTTGTCAAGTGAGCGACGAGAAGTAGAGCGAAAGTTGGAGGACCTAAAAAAGAACCGCAGTGTGGCGCTTGGTCGACAGAAAGGCTACGAGGATGAGATCCTCCGCTTTCGTAAAGAACTCAATGAGGATCAATATTGCCGGGCCGAGGATCTCTACAGAGACAAAATGATTGTGATGAGAACAACAGAGCTGGCCAATAAAGACCTGGACATCTACTATAAAGCCCTAGACCA[G/A]TAAGCTGATTTTATTATCAGGGGGTTTCTAATGGGTAGAGTCAGGTAGCGGTTTGTCAGGATGTGTAGGTTGGTTTTGATGTGGTTCAACAGACCGTATCAGAGAAGCGTCAGTCAGCAACAGGGCATTTAAGAGATTAACTAGACTTGAGGAAGTCTGACTCAGTAAATGAATCATCACTAACAAGTGGACTTCACAGGAACTCCCCTGAAATATTTACCATACCATTGCAACAGTTATCTTGCTATTCTGTATGTGTTGACAGTATATACAATAATTTAACCATTTCGGTGATTGACAATTCAAAGAAGGCCAGTTTTAACATTCAAGCACAAGAAAAAAGTGGAAACCTGACGTAATTAATGCATCTTAGGCAAGGCTTTACATTAACACCCACCAAATGCGGGTAGACTTCAGCTCTGGCTGGTTAGACAGACACCTCCACTAGCCACTTTGGCTGGTTGGAAATAATTTTTTAAATTCTAGTTTTCTTAAAAGCA
Associated Phenotype:
Not determined