ZMP
lss
Ensembl ID:
ZFIN ID:
Description:
lanosterol synthase [Source:RefSeq peptide;Acc:NP_001077036]
Human Orthologue:
LSS
Human Description:
lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:HGNC Symbol;Acc:6708]
Mouse Orthologue:
Lss
Mouse Description:
lanosterol synthase Gene [Source:MGI Symbol;Acc:MGI:1336155]
Alleles
There are 7 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa34708 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa7203 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa41487 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa8616 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa8442 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa34709 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa34708
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087241 | Nonsense | 235 | 735 | 7 | 22 |
Genomic Location (Zv9):
Chromosome 9 (position 39538414)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 38676310 |
GRCz11 | 9 | 38486105 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTGCCCTCCTGGATGCCAGCACACCCCTCCACATTATGGTGCCACTGT[C/T]GACAGGTCTACCTGCCCATGAGCTACTGCTACGCAGTCAGGCTCTCTGCT
Long Flanking Sequence:
ATACAGCTTAAAGTGACATTTAAAGGCTTAACTGGGTTAATTAGGTTGACTAGGCAGGATAGGGTAATTAGGCAAGTTTTTTTTATAACAGTGGTTTGTTCTGTAGATTGTCGAAAAAATATAGCTTAAAGGGGCTAATAATTTTGACCTTAAAATGGTTTTTTAAAAATTTAAAACTGCTTTTATTCTAGCCGAAATAAAACAAATAAGACTTTCTCCAGAAGAAAATATATTATCCTGTGGATTATACTGTGAAATTTTCCATCAATTGGGAAATATTTAAAAAAGAAAGAAAAATTTCAAAAGGGGGCTAATAATTCTGACTTCAACTGTATATGTGTATATGTTCAACTGTATATGTGTATATGTTCAACTGTATATGTGTATATGTTCAACTGTATATGTGTATATGTTCAACTGTATATGTTTTTGTGGTTTGTTTCATTAGGCTTTTGCCCTCCTGGATGCCAGCACACCCCTCCACATTATGGTGCCACTGT[C/T]GACAGGTCTACCTGCCCATGAGCTACTGCTACGCAGTCAGGCTCTCTGCTGATGAAGATCCTCTGGTGCTCAGTTTAAGACAGGTGTAGTTTCAGAGTTTTACCTCTAGGGGTGGGAAGCACTACAGTCTCCACAATACATATGGACCCTGTTCACATTTCTGGATTTCTCTCATTAGCGGAAGTCGTCATAGTGGGGTAAACCTAGAGTGCAGTGAACAGGAGAGTAAAACAATTAATGTTTTTACAATCCTATTTCCTGAAATAGTTATTTAACGATGGTGTTATCAAGACTTCAGAAAAAGAAAATAATTTGTATGATACTGATGCTAGAACAGCAGCCAGAAGATAGAAGAACGTAAATTTTAGTGTCCTGCAACTCTGCATTTCAAATGCTCAAGCTTTAATTAGTTTTTTGTAATTTGATACAAAGATAATATAATATATAGGCAACTTGTACATGCGTTCTTTCAAAAATCAAAATATTAAAAACTTTCAAGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7203
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087241 | Nonsense | 284 | 735 | 8 | 22 |
Genomic Location (Zv9):
Chromosome 9 (position 39540745)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 38678641 |
GRCz11 | 9 | 38488436 |
KASP Assay ID:
554-5331.1 (used for ordering genotyping assays)
KASP Sequence:
GATTACTCCACTATTGACTGGCCAGCTCAGAGGAACAACGTTGCARCCTG[T/A]GATTTATACACACCRCACAGCAACTTGCTTACTTTCGCTTATTGTGAGTG
Long Flanking Sequence:
TAATGTGCACATTGCTGTATTGATTCATATACCAGCAGCCCTACCATTGATTAAAGCTTATAATTGAATTTCATAAAACCTTAAGACAGAGGTCTCCAACCCTGCACCATGGGGGACACCCACTATTCTATGAATTAGTTGAATTCCAGCACTAAGAAAACACACCTAAATCAGCTAATCAATCTTCTGGATCATTTGTACATTCGTAGGTAGGTATGCTGATGCAAATTAATCGAAAAGAACCTCAGTTTTTGCCAAAAATCTTTAATGTTTTACTTTAGAAAAAACTCTCCTACATTTTGTGTGGCCTAATATAAATTCTTAGATTTTTGGATGAGCTATGTATCTGTATAGTACATGATGACAGAATAACAATCTAATTCAGAATTCAATCTAGACACACCAATCCAGATGTTTTTCTTGTGTTTGAAACAGGAGCTCTACGTCCAGGATTACTCCACTATTGACTGGCCAGCTCAGAGGAACAACGTTGCAGCCTG[T/A]GATTTATACACACCACACAGCAACTTGCTTACTTTCGCTTATTGTGAGTGAGAGAAGTATAACATCACTTTAAAAGGAATTAAAACCTTTTGATTGCCATATAACTAATTAAAACCTTATCGTGCAGTTTTCCTGAATGTGTACGAAGCTCATCACAGCACTATACTGAGAGAAAAAGCAGTGAAGGAGCTGTATGACCACATTAAAGCAGACGATCGCTTCACAAAATGTATCAGCATCGGACCGGTGAGTGAAAAAGTAATTGTGTGCTGTGTAAAGTATGAAGTCCTCTTGAAATCAATGCATGTGCCTGATCCTATCGTGTGAATCTGTGCATGTTTAGTATTATTTTGTCAAAAATATTTACTATTTCTTGACCGTAATACTGTCTTTTTTTTTAGATCTCAAAAACGATCAACATGTTGGTACGCTGGTATGTAGATGGACCAACTTCACCTGCCTTCCAGAAGCACGTTTCAAGGATTCCTGACTATCTGTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41487
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087241 | Essential Splice Site | 490 | 735 | 15 | 22 |
Genomic Location (Zv9):
Chromosome 9 (position 39543450)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 38681346 |
GRCz11 | 9 | 38491141 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTCAAAGAGAACATTCCCAAGGAAAGGCTTTTTGATGCTGTCAATGTG[G/A]TAATAACCTTACTTGTGTATATACTGTCTGTTTTGAATGCTGACATAAGA
Long Flanking Sequence:
TTAATCACATCACTAATCAAATTTGCACAAATCTGAAATATTCTTTACTTGTGTCATTTTGAATTTGAATGACCTCATTTGAAATAATAATACAATATTAAAAGCATTTTGTTGTGGTATCAGAATTCTGTTGCACTTCTGTATTTCTGTAGTAATCTTTGGGTCTCCATGTAAGCTCTAACCAGTTTCCCATTATTGTAGGTCAAAGATAATCCTCCAGAATATGAGAAATACTATAGACAAATGAACAAGGTAAACATTTAAGTCTAACATGTCAACTTTATTATTAAGCATTTTTAATTTGCACTTATCCACATTCATAAGCATATGTGTGTATGTGTCTGATGTAGGGAGGCTTTCCCTTCAGCACACGGGACTGCGGTTGGATAGTTGCTGACTGTGTGTCAGAAGGGCTGAAATCTGTGATGCTTCTGCAAGAGCAGTGCAATTTCCTCAAAGAGAACATTCCCAAGGAAAGGCTTTTTGATGCTGTCAATGTG[G/A]TAATAACCTTACTTGTGTATATACTGTCTGTTTTGAATGCTGACATAAGATTTACAGTAAAATGCTATGCTATCAGTATTACACGAATGTTAGACCCTGTTTGGTGGGCCATGAGTCTCTTTGTAGGAAGTCAGTCCCTCAAAAAATGAGCTTTCTTTGTGTTAAATTCAAACAGAGAGTTCAAATACAACATAACAATGTTAAGTGTTTATAGGCTCATAATATGTAGTTGACAGAGGGCTTTTTAAAAACTCTTTCTTTTTCATTTAGTGCTAAAACTTTGAGCTGAAATTAAGATAACCCTTTATTTATTTAATATATTTTAAATGTAAAATCTTCAGTGTCAGAAATCCTTCTAAAATGCTGATAAAAAAATTTAAATAATAGGAAAATCATGGTGAATTTTTTTAGGAATCATTAAACATTTGACATTATAGATATATAGATATTTTTAATATATATCCAGTTGAAAGCAAAATTATTAGCTGTCCTGTGATATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa8616
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087241 | Essential Splice Site | 490 | 735 | 15 | 22 |
ENSDART00000087241 | Essential Splice Site | 490 | 735 | 15 | 22 |
Genomic Location (Zv9):
Chromosome 9 (position 39543451)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 38681347 |
GRCz11 | 9 | 38491142 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCTSAAAGAGAACATTCCCAAGGAAAGGCTTTTTGATGCTGTCAATGTGG[T/A]AATAACCTTACTTGTGTATATACTGTCTGTTTYGAATGCTGAMATAAGAT
Long Flanking Sequence:
TAATCACATCACTAATCAAATTTGCACAAATCTGAAATATTCTTTACTTGTGTCATTTTGAATTTGAATGACCTCATTTGAAATAATAATACAATATTAAAAGCATTTTGTTGTGGTATCAGAATTCTGTTGCACTTCTGTATTTCTGTAGTAATCTTTGGGTCTCCATGTAAGCTCTAACCAGTTTCCCATTATTGTAGGTCAAAGATAATCCTCCAGAATATGAGAAATACTATAGACAAATGAACAAGGTAAACATTTAAGTCTAACATGTCAACTTTATTATTAAGCATTTTTAATTTGCACTTATCCACATTCATAAGCATATGTGTGTATGTGTCTGATGTAGGGAGGCTTTCCCTTCAGCACACGGGACTGCGGTTGGATAGTTGCTGACTGTGTGTCAGAAGGGCTGAAATCTGTGATGCTTCTGCAAGAGCAGTGCAATTTCCTCAAAGAGAACATTCCCAAGGAAAGGCTTTTTGATGCTGTCAATGTGG[T/A]AATAACCTTACTTGTGTATATACTGTCTGTTTTGAATGCTGACATAAGATTTACAGTAAAATGCTATGCTATCAGTATTACACGAATGTTAGACCCTGTTTGGTGGGCCATGAGTCTCTTTGTAGGAAGTCAGTCCCTCAAAAAATGAGCTTTCTTTGTGTTAAATTCAAACAGAGAGTTCAAATACAACATAACAATGTTAAGTGTTTATAGGCTCATAATATGTAGTTGACAGAGGGCTTTTTAAAAACTCTTTCTTTTTCATTTAGTGCTAAAACTTTGAGCTGAAATTAAGATAACCCTTTATTTATTTAATATATTTTAAATGTAAAATCTTCAGTGTCAGAAATCCTTCTAAAATGCTGATAAAAAAATTTAAATAATAGGAAAATCATGGTGAATTTTTTTAGGAATCATTAAACATTTGACATTATAGATATATAGATATTTTTAATATATATCCAGTTGAAAGCAAAATTATTAGCTGTCCTGTGATATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa8442
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087241 | Essential Splice Site | 490 | 735 | 15 | 22 |
ENSDART00000087241 | Essential Splice Site | 490 | 735 | 15 | 22 |
Genomic Location (Zv9):
Chromosome 9 (position 39543451)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 38681347 |
GRCz11 | 9 | 38491142 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCTSAAAGAGAACATTCCCAAGGAAAGGCTTTTTGATGCTGTCAATGTGG[T/A]AATAACCTTACTTGTGTATATACTGTCTGTTTYGAATGCTGAMATAAGAT
Long Flanking Sequence:
TAATCACATCACTAATCAAATTTGCACAAATCTGAAATATTCTTTACTTGTGTCATTTTGAATTTGAATGACCTCATTTGAAATAATAATACAATATTAAAAGCATTTTGTTGTGGTATCAGAATTCTGTTGCACTTCTGTATTTCTGTAGTAATCTTTGGGTCTCCATGTAAGCTCTAACCAGTTTCCCATTATTGTAGGTCAAAGATAATCCTCCAGAATATGAGAAATACTATAGACAAATGAACAAGGTAAACATTTAAGTCTAACATGTCAACTTTATTATTAAGCATTTTTAATTTGCACTTATCCACATTCATAAGCATATGTGTGTATGTGTCTGATGTAGGGAGGCTTTCCCTTCAGCACACGGGACTGCGGTTGGATAGTTGCTGACTGTGTGTCAGAAGGGCTGAAATCTGTGATGCTTCTGCAAGAGCAGTGCAATTTCCTCAAAGAGAACATTCCCAAGGAAAGGCTTTTTGATGCTGTCAATGTGG[T/A]AATAACCTTACTTGTGTATATACTGTCTGTTTTGAATGCTGACATAAGATTTACAGTAAAATGCTATGCTATCAGTATTACACGAATGTTAGACCCTGTTTGGTGGGCCATGAGTCTCTTTGTAGGAAGTCAGTCCCTCAAAAAATGAGCTTTCTTTGTGTTAAATTCAAACAGAGAGTTCAAATACAACATAACAATGTTAAGTGTTTATAGGCTCATAATATGTAGTTGACAGAGGGCTTTTTAAAAACTCTTTCTTTTTCATTTAGTGCTAAAACTTTGAGCTGAAATTAAGATAACCCTTTATTTATTTAATATATTTTAAATGTAAAATCTTCAGTGTCAGAAATCCTTCTAAAATGCTGATAAAAAAATTTAAATAATAGGAAAATCATGGTGAATTTTTTTAGGAATCATTAAACATTTGACATTATAGATATATAGATATTTTTAATATATATCCAGTTGAAAGCAAAATTATTAGCTGTCCTGTGATATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34709
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087241 | Nonsense | 531 | 735 | 17 | 22 |
Genomic Location (Zv9):
Chromosome 9 (position 39547013)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 38684909 |
GRCz11 | 9 | 38494704 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATTCCTGTTAAATGTCTCTTTCAGGTGATATAATGATTGACTACACGTA[T/A]GTTGAGTGCACCTCAGCTGTACTGCAGGCATTGAAACATTTTCACAGCGT
Long Flanking Sequence:
TTCCAATAGTGAAAGTTATTTATTTTCACATCTTTATAAGAAACAAGTGACTGTTCTTTTTAGGCAATGTGTGTTTTAATTTCAGTCATTCAGCATTGATGATCAATAATAATTATAGATGGTAGATGTGTGTGTTTCCTTTAGATATTTTAAAATCAAGTAATGCAAAAATCTCTCACTTGTAATTTGGGGGCATATTTACTGTAGAAAACCTATCAGTGAACTATGAGGGCAAAAAAATAAATTGCCCAGCCCTATCTTAAGCTTTGAGCATTAATGTAATTTTTCTGTGTCAGCTGTTGAGCATGAGAAACCCTGATGGAGGCTTTGCCACGTATGAGACGAAACGTGGCGGGAAACTGCTGGAGCTGCTGAACCCGTCTGAAGTATTTGGTGAGCGTGCATTAAAATACCGTATTTAGCTGTCAGGGCATTTCCTATTAGATTTAAAATTCCTGTTAAATGTCTCTTTCAGGTGATATAATGATTGACTACACGTA[T/A]GTTGAGTGCACCTCAGCTGTACTGCAGGCATTGAAACATTTTCACAGCGTATATCCTGAGCACAGAGCAGAAGAGATCAGGTATACACAGACACAGCATCTCAGTATTTTTGTTTAAATAAAAAATACCCAACATTACAGTAAAGCAAAAAAAAATAAAAACATATATCTATAATGAGTTGTGAAGAATGGTTTGGTTGAAGCTTGTCTCTTGTTTTTTTATAGGAGCACTCTTCAGCGGGGGCTGGACTACTGCAGGAGGGTTCAGAGACCTGATGGCTCATGGGAAGGGTAGGCGTTGATTCATTTATAACAAAGTCCTACATCTTAAAAAAAATGTTTCTTGCTAATTTGACCTAATCTAATGATGAAATTTAATGTGTGAACGACAATTTCACACAGACTTGAATTAAATGTTTTCTATATAAAGATGTAAACATTTTGACATTAGTTTAAATTTAAATGCATTCCAACGTACACAGTGTATATACAGTTGAAGAA
Associated Phenotype:
Not determined