ZMP
ybx1
Ensembl ID:
ZFIN ID:
Description:
Y box binding protein 1 isoform 1 [Source:RefSeq peptide;Acc:NP_001119929]
Human Orthologue:
YBX1
Human Description:
Y box binding protein 1 [Source:HGNC Symbol;Acc:8014]
Mouse Orthologue:
Ybx1
Mouse Description:
Y box protein 1 Gene [Source:MGI Symbol;Acc:MGI:99146]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa34489 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa21382 | Nonsense | Available for shipment | Available now |
sa21381 | Essential Splice Site | Available for shipment | Available now |
sa42 | Missense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa34489
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024320 | Nonsense | 9 | 309 | 1 | 8 |
ENSDART00000110512 | Nonsense | 9 | 237 | 1 | 6 |
The following transcripts of ENSDARG00000004757 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 49307995)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 47161390 |
GRCz11 | 8 | 47151856 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCGGCTTTACCAACAAGAAAACAACATGAGCAGCGAGGCCGAGACACAA[C/T]AGCCGCCGCAGCCTGCCGCCGACGCGGAGAGCCCGTCCAGCCCGGCAGCC
Long Flanking Sequence:
TATAAATGTATGTCAATCTCTTCGTTAAGAAATCTGGAACTCAAGCTCATGTTCTGGTTTTACGTTTGTTTCCCTTTAGCGTGTGTTAAATATCTACCTGCCGGTATGTCTGGAAGGTTAAATAGGGTCTTGATTTGCAGGCGGTGCTAATTATTTGTTTAACCAGTCCCGGTCAGCCCTACAATTATTTTTATGTGAATGATAGCAAAAGTGTCCAATGGGCGTCGGCGAAAAAGCTGACGTTGACTTATCGCAAGTTCGTCGACCAATTAGATTGGGGAATGGGTGGAGAGATGTGACAGAATATCGTCCGGCATTTTTACTCAGTCCGTCCAGTTCGATCGGCAACGGGAGCGGAGAAAGGAAAGCGGAGAGCCCGAAGGCAGCAGCCCCCACCACCGCCGGCCCAGGTTACCATCTAGCACCGGGAAAACACACTAGAGAGCCACCGCCGGCTTTACCAACAAGAAAACAACATGAGCAGCGAGGCCGAGACACAA[C/T]AGCCGCCGCAGCCTGCCGCCGACGCGGAGAGCCCGTCCAGCCCGGCAGCCGCAGCTACCGCGGGGGATAAGAAGGTCATCGGTAAGCTTGTCGGCGAAACCAAAGCCCCCCTGGCCTGCGGTCGTTTAAGTTTCGGAATAATACATTTTCTTAAACGCTCCAGGGTTTATTTCAGTTATGTTACAAAATGTATGTCAGTTCAAGAAAGGCCACGCTGTCTGCGACTGTGCTGTCGTTATTCCGTCACCAACTTAATTTGTGTTCTGTACCCGTGGCGTCCTGCCTGGTATTTTTGTTTTGGAGCTGTCCGTTTATTTACCACATGTTAAGATTTACGTACATTAAACTTGAGACGTTAAACGGTTTCACCCAGTTTGAATGTTAACTCGCGTGTCGCGTTCCATCACATCCGCGTGCGGATTGAAGACCGCCATGACGCGTGCTCGAGCCCGCGGCCTGCTTCAGCAAATACGAGACGCAGCGTGCTTCTTGCATTTACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21382
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024320 | Nonsense | 12 | 309 | 1 | 8 |
ENSDART00000110512 | Nonsense | 12 | 237 | 1 | 6 |
The following transcripts of ENSDARG00000004757 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 49307986)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 47161381 |
GRCz11 | 8 | 47151847 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCAACAAGAAAACAACATGAGCAGCGAGGCCGAGACACAACAGCCGCCG[C/T]AGCCTGCCGCCGACGCGGAGAGCCCGTCCAGCCCGGCAGCCGCAGCTACC
Long Flanking Sequence:
ATGTCAATCTCTTCGTTAAGAAATCTGGAACTCAAGCTCATGTTCTGGTTTTACGTTTGTTTCCCTTTAGCGTGTGTTAAATATCTACCTGCCGGTATGTCTGGAAGGTTAAATAGGGTCTTGATTTGCAGGCGGTGCTAATTATTTGTTTAACCAGTCCCGGTCAGCCCTACAATTATTTTTATGTGAATGATAGCAAAAGTGTCCAATGGGCGTCGGCGAAAAAGCTGACGTTGACTTATCGCAAGTTCGTCGACCAATTAGATTGGGGAATGGGTGGAGAGATGTGACAGAATATCGTCCGGCATTTTTACTCAGTCCGTCCAGTTCGATCGGCAACGGGAGCGGAGAAAGGAAAGCGGAGAGCCCGAAGGCAGCAGCCCCCACCACCGCCGGCCCAGGTTACCATCTAGCACCGGGAAAACACACTAGAGAGCCACCGCCGGCTTTACCAACAAGAAAACAACATGAGCAGCGAGGCCGAGACACAACAGCCGCCG[C/T]AGCCTGCCGCCGACGCGGAGAGCCCGTCCAGCCCGGCAGCCGCAGCTACCGCGGGGGATAAGAAGGTCATCGGTAAGCTTGTCGGCGAAACCAAAGCCCCCCTGGCCTGCGGTCGTTTAAGTTTCGGAATAATACATTTTCTTAAACGCTCCAGGGTTTATTTCAGTTATGTTACAAAATGTATGTCAGTTCAAGAAAGGCCACGCTGTCTGCGACTGTGCTGTCGTTATTCCGTCACCAACTTAATTTGTGTTCTGTACCCGTGGCGTCCTGCCTGGTATTTTTGTTTTGGAGCTGTCCGTTTATTTACCACATGTTAAGATTTACGTACATTAAACTTGAGACGTTAAACGGTTTCACCCAGTTTGAATGTTAACTCGCGTGTCGCGTTCCATCACATCCGCGTGCGGATTGAAGACCGCCATGACGCGTGCTCGAGCCCGCGGCCTGCTTCAGCAAATACGAGACGCAGCGTGCTTCTTGCATTTACATGCTCGCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21381
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024320 | Essential Splice Site | 68 | 309 | None | 8 |
ENSDART00000110512 | None | None | 237 | None | 6 |
The following transcripts of ENSDARG00000004757 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 49305528)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 47158923 |
GRCz11 | 8 | 47149389 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTTTATTTTTGCAGGAATGACACAAAGGAAGATGTCTTTGTGCATCAGG[T/C]GATTATTTTCTCCAGTTTTCTTTTTATATTTGTGTTGGGGTAGATGTATT
Long Flanking Sequence:
TAAAAGCTCTACAGTTGGAGGCTATAAATAGAGCACACAAAATGAACTCCGCTAGCCAGGGATGGTAACTTTGCTCAATGCGTCTTTCATTATTCGGTGTAACCTGACTCTTGAATACTGTTTTTTAAAATACAGATTTGTTTTGAGTCTTAAATCTGTTTTTAACAGCCCTTTTCCTCATCTTTGCAGCAACAAAAGTTTTGGGGACAGTGAAATGGTTCAATGTAAGGAACGGCTACGGTTTCATCAACAGGTAAATAACTTTCAGCTTCTGAAGAGCTATCTAATATAATATGTGGGTCAGGGAACATCCACAATCCTATTAGAGCTTTGCTTACAAAGCAGGACCTGACATGCACTAGCATGCTAATATTTATCCAAATATTTAACTTGCTGCTCAACTGAACATGCTTGTTTACACTAAGTCCTCGGCTTTTAATGTTTTCACTTTCTTTATTTTTGCAGGAATGACACAAAGGAAGATGTCTTTGTGCATCAGG[T/C]GATTATTTTCTCCAGTTTTCTTTTTATATTTGTGTTGGGGTAGATGTATTTTTTTCTGATTGCCTTTGTTTTCTGTCTAGACCGCCATTAAAAAGAACAACCCCAGGAAATATCTCCGTAGCGTTGGGGACGGAGAGACTGTGGAGTTCGACGTGGTAGAAGGGGAGAAGGTGAGCTTTTAGTCGTAGCTTAGTTTGACTCAAACAAAAGTTTCACCACACAGTTAGAAATATTAGGCTTGAGGACTTGTTTAATAAAAGTCAAGGACAAATTATTTATTGAGAAATGTATTATTTCTTTCTTGCTTTTATGTAGTACTAGTCAAGCTTTGGGCTTTAAATTAAAATGCATTAAACAGCACAAAATCATAACACAGATGTCAAACTCAATCCTGGAGGGCCGCAGCTCTGCTCAGTTTAGTTCCAACGCTAATTAAACACACATGATAGAACTGAGTCCTTCAAGCTTGTTTAATACATACATGCAAGTGTGTTGAAGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Missense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000024320 | Missense | 83 | 309 | 4 | 8 |
ENSDART00000110512 | None | None | 237 | None | 6 |
The following transcripts of ENSDARG00000004757 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 49305405)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 47158800 |
GRCz11 | 8 | 47149266 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTCTAGACCGCCATTAAAAAGAACAACCCCAGGAAATATCTCCGTAGC[G/T]TTGGGGACGGAGAGACTGTGGAGTTCGACGTGGTAGAAGGGGAGAAGGTG
Long Flanking Sequence:
TTTAAAATACAGATTTGTTTTGAGTCTTAAATCTGTTTTTAACAGCCCTTTTCCTCATCTTTGCAGCAACAAAAGTTTTGGGGACAGTGAAATGGTTCAATGTAAGGAACGGCTACGGTTTCATCAACAGGTAAATAACTTTCAGCTTCTGAAGAGCTATCTAATATAATATGTGGGTCAGGGAACATCCACAATCCTATTAGAGCTTTGCTTACAAAGCAGGACCTGACATGCACTAGCATGCTAATATTTATCCAAATATTTAACTTGCTGCTCAACTGAACATGCTTGTTTACACTAAGTCCTCGGCTTTTAATGTTTTCACTTTCTTTATTTTTGCAGGAATGACACAAAGGAAGATGTCTTTGTGCATCAGGTGATTATTTTCTCCAGTTTTCTTTTTATATTTGTGTTGGGGTAGATGTATTTTTTTCTGATTGCCTTTGTTTTCTGTCTAGACCGCCATTAAAAAGAACAACCCCAGGAAATATCTCCGTAGC[G/T]TTGGGGACGGAGAGACTGTGGAGTTCGACGTGGTAGAAGGGGAGAAGGTGAGCTTTTAGTCGTAGCTTAGTTTGACTCAAACAAAAGTTTCACCACACAGTTAGAAATATTAGGCTTGAGGACTTGTTTAATAAAAGTCAAGGACAAATTATTTATTGAGAAATGTATTATTTCTTTCTTGCTTTTATGTAGTACTAGTCAAGCTTTGGGCTTTAAATTAAAATGCATTAAACAGCACAAAATCATAACACAGATGTCAAACTCAATCCTGGAGGGCCGCAGCTCTGCTCAGTTTAGTTCCAACGCTAATTAAACACACATGATAGAACTGAGTCCTTCAAGCTTGTTTAATACATACATGCAAGTGTGTTGAAGCAGGGTTAAAACTAAACAGTTCCTGGTGGGTTGCAGTCCTGTATGGAGTTTGACACCCCTGCCTTGACTTTAATTGACTTTTCGATAGGGGTGGCTGAATATCTTGACTCTTGAATATGTGGAAA
Associated Phenotype:
Not determined