ZMP
mmp9
Ensembl ID:
ZFIN ID:
Description:
matrix metalloproteinase-9 [Source:RefSeq peptide;Acc:NP_998288]
Human Orthologue:
MMP9
Human Description:
matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) [Source:HGNC S
Mouse Orthologue:
Mmp9
Mouse Description:
matrix metallopeptidase 9 Gene [Source:MGI Symbol;Acc:MGI:97011]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa34399 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa12776 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa34399
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000062845 | Nonsense | 231 | 680 | 5 | 13 |
The following transcripts of ENSDARG00000042816 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 25144743)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 24270561 |
GRCz11 | 8 | 24291800 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTCCTTCAGCCATTCAAACCCGCTACGGTAATGCTGAGGGTGCAATGTG[T/A]CACTTCCCCTTCCTGTTTGAGGGAACATCCTACTCCACCTGCACCACTGA
Long Flanking Sequence:
TTTAAAACATAATTTAGCATCGCTCTTTATTATAACAACTGCATAGTGTGCATAGAGGAGCAATAGCTCCCTCTGCAGTTCTGAATGAGTAGTGACGGTTACAAACTTTTTTCTTTCAAAATTGTAATTAAAACAATGATTATTATATATATTTATTTTAAAGTAAAATACTATTTAAGATTTCTTTTTTAATCTTCCATGTTTATTCTTATTGTTTGTGTTTATTAGCAACTTCTGAGTAAAAATATTTCTTCACCATTTTGTTTTTCAATTTGAGATAGCATTTTAACATGTCCTTTGCAACAATAATAATACAAATTTTCATTTTATAAACGTGTTGTTTTTGCAATATTGGATGCAATCTAAAATATATATATACATCTCAGGAATACAAGAGGCGACCATAATGTTTCTATATATTACATTATAGTAGATATTGACAATAATATTCCTCCTTCAGCCATTCAAACCCGCTACGGTAATGCTGAGGGTGCAATGTG[T/A]CACTTCCCCTTCCTGTTTGAGGGAACATCCTACTCCACCTGCACCACTGAGGGCCGCACAGATGGCCTTCCCTGGTGCTCAACCACCGCAGACTATGACAAGGACAAGAAGTTTGGCTTCTGTCCCAGTGAGCGTAAGTATGCTAATCTTGAATTTATGGAGCTTTAACCTTAATATATTCACAATATTTTAATAAGAACTTGTATTTATTCTCTGATGTTCCATCTCTGCCATCCCACAGTTCTCTTCACATTTGACGGGAACAGCAATGAAGCACCATGTGTTTTCCCCTTCATTTTTGATGGGAAGAAATATGATTCATGCACTACAGAAGGACGAAATGACGGATATCGCTGGTGCTCCACTACAGCTAACTTTGACACTGATAAGAAGTATGGATTCTGCCCTAACAGAGGTAAACTTACCTTAAAACGTAAAGGAATAATTCACCTAAACATGAATTTTAACTATTTTTTACACCTTTAATGGAGTTTCGTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12776
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000062845 | Essential Splice Site | 607 | 680 | 11 | 13 |
The following transcripts of ENSDARG00000042816 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 25147341)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 24273159 |
GRCz11 | 8 | 24294398 |
KASP Assay ID:
2260-0575.1 (used for ordering genotyping assays)
KASP Sequence:
CAGAGAGGAAAAGGCAAGGTGCTCCTGTTTAATGGAGAAAACTTCTGGAG[G/A]TAARTAACTATAACTAAGAGCTGATCAGAAAGTGTACTAATTTTAGAATC
Long Flanking Sequence:
AAAAGTTTTTGTTTTCTAAATAATTGGTATCACACTAGCAAGATTGCGACGGTTCCAAACAAAGCTTCAGCAGAACTTTTTTTTTTGCATCTCAGAGCAACACTACATTGATTAATCCTTAAATGATTCATTGATTCAGTCAGTCACAAAAGCAGTCGTTTGTCACAATTTCTACATCAATTAGTTGCTTTGAACAAATCATTTAATGGACGATTATCAACTCTTTATACCTGGAAATCTATCAAAAGCACACTCAGTATAATATTGTTTTGTTATTTTGGTCAATATTAAAATATATTGCACACCCCTAGTTCAGAAATATAATATCATCCGTATTTAATCCACACAGAGAGACAGTTCTGGGTTTACAGTGGAAATGATGTGCTTGGACCACGTAAAATCGAGAAGCTCGGCCTACCAAGCGACTTGGACAAAGTGGAAGGATCTATGCAGAGAGGAAAAGGCAAGGTGCTCCTGTTTAATGGAGAAAACTTCTGGAG[G/A]TAAGTAACTATAACTAAGAGCTGATCAGAAAGTGTACTAATTTTAGAATCAATATAAACCAGTATTTGCGATAGTCTTTTCTTTGCTATTGCAACTTCACATGCCAAAAAATATGAAGAACTGCGCATCGGTGGAGTTGCTACTCAGTTTTTCGGCTTACAGCAGTGACATTTACCTTACACTGTGCTGAACTGAACTAAACTGAACTTCAACAGTGACAACGGAACTGAACTGAAGCAGTTTTAATGCCACATAACTTCATCTATGTTAAGCTGCTTTGACACAATCTACACTGTAAAAAGCACTATAGAAATAAAGAGGATTTGAATTGAATTGATTGATTGATTTTGTCCAATGGAAATTGATTGGACCATTGGTGGGTCTCACGTGAGTGAGCAGCACCTGTAACCATGGCATCAGAGATGTTATTGCTGGAGGAAGGAGATGCTATTTTGATTAAACAGTATAAGGCTGTTTTTATTTTAAAAACATATGCAAAT
Associated Phenotype:
Not determined