ZMP
ppardb
Ensembl ID:
ZFIN ID:
Description:
peroxisome proliferator-activated receptor delta b [Source:RefSeq peptide;Acc:NP_571543]
Human Orthologue:
PPARD
Human Description:
peroxisome proliferator-activated receptor delta [Source:HGNC Symbol;Acc:9235]
Mouse Orthologue:
Ppard
Mouse Description:
peroxisome proliferator activator receptor delta Gene [Source:MGI Symbol;Acc:MGI:101884]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34394 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa41198 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa2434 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa34394
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000013214 | Essential Splice Site | 24 | 367 | 3 | 7 |
| ENSDART00000128783 | Essential Splice Site | 174 | 517 | 3 | 7 |
| ENSDART00000132584 | Essential Splice Site | 174 | 517 | 4 | 8 |
| ENSDART00000135394 | Essential Splice Site | 174 | 219 | 4 | 4 |
| ENSDART00000141099 | None | None | 120 | None | 3 |
Genomic Location (Zv9):
Chromosome 8 (position 24567850)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 23693668 |
| GRCz11 | 8 | 23714907 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGCATGTGTGCCTTTCCGTTTTTCAGTGAGGATGTCATTTGTGTTTAAA[G/A]GGTTTTTTCAGGCGCACCATTCGTATGAAGTTGGAGTACGAGCGATGTGA
Long Flanking Sequence:
GGGAGAGGGGATGAGGGACAATGGCGCTTTGGCATGGTTTAAGGCACCTGTACCTAATGTGAGTGCGCCCTGAAATATCCTACAGCATCTTTAATAAAATAACTCTTTATTTTAAATCTCTGGGCTTCCTAATCGCCAACCTGATTTCACCAAGTAGAACATGCTCCTGGATTAACATCTATGTTGATCCTGGAACAACTTTCCAATCAGCCAATCAGAATGAAGGGATACGTTTACCATTTGTTAAGTTTAGGCTTATGGTTATATTTATGCACTTCTACATTGTTATCTAACTCTTATTCCCCTCTGATTTTGAGGAAAATTTGCAGTTAATATTCCATGAAATACATTTTCAAAAAAAAAAAAAAAAAGATGTTCCAGGATCAACATTGATGTGCCTTCCTAATGGTTAAAGCTGCGTTTCTGTGGTCAAGTAATTCAGCAGCCCACGTGCATGTGTGCCTTTCCGTTTTTCAGTGAGGATGTCATTTGTGTTTAAA[G/A]GGTTTTTTCAGGCGCACCATTCGTATGAAGTTGGAGTACGAGCGATGTGAGCGCGCCTGTAAAGTCCAGAAAAAGAGCCGGAACAAATGCCAGTACTGCCGCTTTCAGAAGTGCCTGGCACTGGGCATGTCTCATGACGGTACAGTTCACTGCTTACTGCACATCCAAACCAAGTCACCTTGATTTGTATAGAACATAAGACATTTCAGATTGTTTCCAAACAGCTGAGAACTTTCATCAAGTGCAGACTTGCATCAAGTAAGAAACAATCTGAGATTCAACTGTTTAGTTAGAAGTTCCACAGAAGGGCAATGGTGTTCAGCTTAAGTCACTGTTAAATCACTTCTGTTAGTTTACTTGATTTTTTTTTATTGTGAAATGAAATCAATGCAGCTATAAGGCAGAAGAAACAGTGCCATTCAGCTCAGTTAAGTTCAAGCTTTTTTAATGACAATTTTGTAATCTGGCAGTGTTAATGTAGTAAAATAAAAGTTACTAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41198
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000013214 | Nonsense | 36 | 367 | 3 | 7 |
| ENSDART00000128783 | Nonsense | 186 | 517 | 3 | 7 |
| ENSDART00000132584 | Nonsense | 186 | 517 | 4 | 8 |
| ENSDART00000135394 | Nonsense | 186 | 219 | 4 | 4 |
| ENSDART00000141099 | None | None | 120 | None | 3 |
Genomic Location (Zv9):
Chromosome 8 (position 24567889)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 23693707 |
| GRCz11 | 8 | 23714946 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTGTTTAAAGGGTTTTTTCAGGCGCACCATTCGTATGAAGTTGGAGTA[C/A]GAGCGATGTGAGCGCGCCTGTAAAGTCCAGAAAAAGAGCCGGAACAAATG
Long Flanking Sequence:
TAAGGCACCTGTACCTAATGTGAGTGCGCCCTGAAATATCCTACAGCATCTTTAATAAAATAACTCTTTATTTTAAATCTCTGGGCTTCCTAATCGCCAACCTGATTTCACCAAGTAGAACATGCTCCTGGATTAACATCTATGTTGATCCTGGAACAACTTTCCAATCAGCCAATCAGAATGAAGGGATACGTTTACCATTTGTTAAGTTTAGGCTTATGGTTATATTTATGCACTTCTACATTGTTATCTAACTCTTATTCCCCTCTGATTTTGAGGAAAATTTGCAGTTAATATTCCATGAAATACATTTTCAAAAAAAAAAAAAAAAAGATGTTCCAGGATCAACATTGATGTGCCTTCCTAATGGTTAAAGCTGCGTTTCTGTGGTCAAGTAATTCAGCAGCCCACGTGCATGTGTGCCTTTCCGTTTTTCAGTGAGGATGTCATTTGTGTTTAAAGGGTTTTTTCAGGCGCACCATTCGTATGAAGTTGGAGTA[C/A]GAGCGATGTGAGCGCGCCTGTAAAGTCCAGAAAAAGAGCCGGAACAAATGCCAGTACTGCCGCTTTCAGAAGTGCCTGGCACTGGGCATGTCTCATGACGGTACAGTTCACTGCTTACTGCACATCCAAACCAAGTCACCTTGATTTGTATAGAACATAAGACATTTCAGATTGTTTCCAAACAGCTGAGAACTTTCATCAAGTGCAGACTTGCATCAAGTAAGAAACAATCTGAGATTCAACTGTTTAGTTAGAAGTTCCACAGAAGGGCAATGGTGTTCAGCTTAAGTCACTGTTAAATCACTTCTGTTAGTTTACTTGATTTTTTTTTATTGTGAAATGAAATCAATGCAGCTATAAGGCAGAAGAAACAGTGCCATTCAGCTCAGTTAAGTTCAAGCTTTTTTAATGACAATTTTGTAATCTGGCAGTGTTAATGTAGTAAAATAAAAGTTACTAAAAGTTAGTTCACATCAAAATAAAAATGTAGTCGTCATAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2434
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000013214 | Nonsense | 248 | 367 | 6 | 7 |
| ENSDART00000128783 | Nonsense | 398 | 517 | 6 | 7 |
| ENSDART00000132584 | Nonsense | 398 | 517 | 7 | 8 |
| ENSDART00000135394 | None | None | 219 | None | 4 |
| ENSDART00000141099 | None | None | 120 | None | 3 |
Genomic Location (Zv9):
Chromosome 8 (position 24573570)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 23699388 |
| GRCz11 | 8 | 23720627 |
KASP Assay ID:
554-2941.1 (used for ordering genotyping assays)
KASP Sequence:
TGGCCAATGGGAAGGGTTTTGTGACGAGAGAGTTTCTGCGAAGTTTACGC[A/T]AGCCATTCAGTGAGATCATGGAGCCCAAGTTTGAGTTTGCAGTGAAATTC
Long Flanking Sequence:
AAACAAAAGAAACTACAAACAAAATACAGGTTGTTACAGAAAAAATTATTGGTCAAAATAACAACTGAGGTTCTGAATTTTGTTTGAAACATTGGTATTTTTTATTTTTTTATGAATATAAATGTCTGAAATCTTTTATGCCAAAAAATGCTCTTAATGACTATTTTTTTGGAGAAATGCCATCAGTTGTTTACAAAATAAAACAAAAAATACATTTAACTCAAACGTTTTCAAATCTTCATTTTTTAGCATAGCTTTATATATAAACATTTTATATTATACCTTTATTTAGTGGCTTATTGTATATGGGGATTATCATACATGAATTAAGTATTGATACATAATGTCTTCTCTCTCACTTTATCTCTCAGGTAACGCTTTTAAAATATGGAGTCCATGAGGCCATATTTGCGATGCTCCCATCTCTCATGAATAAAGATGGACTGTTGGTGGCCAATGGGAAGGGTTTTGTGACGAGAGAGTTTCTGCGAAGTTTACGC[A/T]AGCCATTCAGTGAGATCATGGAGCCCAAGTTTGAGTTTGCAGTGAAATTCAATGCTCTGGAGCTGGACGACAGTGACCTGGCTCTGTTTGTAGCAGCCATCATATTGTGTGGAGGTGAGGATATTGAGCCGTTTATTCCAGATGCTTGCTTCACTCCATCATTTGCTTTGATTGCTCAAGTTCTTTTAAAGCAATACTTCAACCGGATAATAATCATTTTGACCTCAAGATCTACATACAAACTCCATGAAGTTAGTTAAACTTCTATAAATTCTCCAACAGGTGGGATCAGATGTAGAGTATATGTGGAATCCCGCTGTAGAATAGCTCGCTCCAGGATGATACACAAGTTTTTAGTACTTGGAGATTTCCCACGTGTCATATTTGTATAAGCGTTTAACTATCAAGCATATATTTTTCCGCTTGTGTTGTCTTCAATTCTGTTAGAAACGTGTTTTATACAGTTCATTCTTTTTAAAGTGATTTTTAACACTTTTTTT
Associated Phenotype:
Not determined