ZMP
fgd1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate FYVE, RhoGEF and PH domain containing 3 (FGD3) [Source:UniProtKB
Human Orthologue:
FGD1
Human Description:
FYVE, RhoGEF and PH domain containing 1 [Source:HGNC Symbol;Acc:3663]
Mouse Orthologue:
Fgd1
Mouse Description:
FYVE, RhoGEF and PH domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:104566]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34297 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa34297
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000004921 | Essential Splice Site | 632 | 839 | 14 | 17 |
| ENSDART00000135398 | Essential Splice Site | 350 | 555 | 10 | 13 |
Genomic Location (Zv9):
Chromosome 8 (position 8363579)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 7726111 |
| GRCz11 | 8 | 7764912 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTTATGTCTGTGAATACTCACTGTAATATTCTGACCGGTCTTTGTTTTC[A/T]GAATTGCTCAGAGCTTGGAAAGCGAGCGCCCACTCCGATCCGGGAGAAAG
Long Flanking Sequence:
GTATATATGCTGGAGTCAGGAAATGTATGTTAGTTGCGAACCTCTTGAATGTAATTCTTGTATTGCATTGGGGTAACGTAACCCGGAGCTCTGTCATCGAATTATTCATTTGTATCTAATAAATTACTAATACTTTTGGCATTGAAGAAAACACTCTCCTGACCTTTTCTTATTGAACACGCATGGAATTGGCTTGACATGCCAACAATCTATTGTAATATTCTGCTAACAAATGCTCTAAATTATAATATTATTAGAAATTTCGCAGGCATGTTATCAGTATTTTAGGAAATAAAACACCAAATGACCCTGCCTGTTATTGGCAAATCCACGGAACTAATAAATATAAATACAAATGTTTTTGCTTCAGAAAACAAAATATAAATCCTCAAGGTGAAAAAATGCTTAAAAGACGCACTCTCTAATGCAAGCCATTTAAGTTTAGGTGTAGGTTATGTCTGTGAATACTCACTGTAATATTCTGACCGGTCTTTGTTTTC[A/T]GAATTGCTCAGAGCTTGGAAAGCGAGCGCCCACTCCGATCCGGGAGAAAGAAGTTACGCTGTGCATGAAGTGTCAGGAGCCGTTCAACTCCATCACCAAACGACGCCATCACTGCAAAGCCTGCGGACATGTAGGATCAAAACACACCATAACTGTGTTTATAGGGCATGCTGATGTTGACAGCGCACTGACGTGGGTCTTTTTTTATTTCAGGTGGTGTGTGGAAAGTGTTCAGAGTTTCGTGCCCGGCTGTTGTATGATAATAACCGAGCCAACCGTGTGTGTATAGACTGTTATACCATGCTAGTTGGAGTGCCGCCGTCTCCTGCCAGTCTGAGCAGCAGCACACAGAGACGACGCTCCATCCTAGAGGTACAAGTCTATGTGATGTTGCTGAGACTTTTATGTCAGTATGTTGATGTACTTCCTACTGAAATGGAATATTGAGTAGGGGGTGGAGCTTTCCTTTTGTGCATCATTCCTTTGTTGCAAACTAAGGC
Associated Phenotype:
Not determined