ZMP
wu:fa99e04
Ensembl ID:
ZFIN ID:
Human Orthologue:
CD44
Human Description:
CD44 molecule (Indian blood group) [Source:HGNC Symbol;Acc:1681]
Mouse Orthologue:
Cd44
Mouse Description:
CD44 antigen Gene [Source:MGI Symbol;Acc:MGI:88338]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21059 | Nonsense | Available for shipment | Available now |
| sa34175 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa21059
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000126240 | Nonsense | 60 | 392 | 2 | 8 |
Genomic Location (Zv9):
Chromosome 7 (position 51347337)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 49617573 |
| GRCz11 | 7 | 49890349 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTCTCTTACCTTTCAGAAGGCTGGTGAACTGTGTCAGAGTTTAGGTTAC[A/T]GACTTGCAACACAAGAACAGGTCACTGAAGCCTATAAAAAAGGCTTGAGA
Long Flanking Sequence:
TGTAAACAGCAACCTTAACCTATTTGGTAGCATACAAGGTACATCAAAATCCCTCTTCAGCAAAATATAAATACGATTCTCGACTATGTAATTGATGTTTTTAAAATCATATGATTCTCCCAACATATTATTTAAGACAAAAACGAGAGGTTATTTATAAAACCAGAGGCTTACGGATGGCTTAGATGTGTTACCAATGTGCTCACGTCTGCACATGCACTGAATCATTAGGAGATTTGTGTAATGATACCTGATGGTAAATTGCACATCCATTACACACAGAGCCTGCATCTGGCCTTCATTTACAAACTAATCTTTTGTGTGATTACACATGGAAAAGAGTTAATAAAGAAAGAAAGATCTGAATATTCACATTAGTTTCCCTTTTGACAGGTAACAGTGGGAGATGCAGTTTTGCTGGTGTTTTCCACATCGAGGGAATCAGTCGTTACTCTCTTACCTTTCAGAAGGCTGGTGAACTGTGTCAGAGTTTAGGTTAC[A/T]GACTTGCAACACAAGAACAGGTCACTGAAGCCTATAAAAAAGGCTTGAGAACTTGCAGGTAAAAAAATAAAACTAAACAGGCTGGGTACAATAGCCCTAGCCCAGAGCTAAATAACATGTTAAGGCATAAATGCACTTCTTTTGATATTGTCTAATGGGAGCACTTTTTTTTTTTTTAATGAACTCCACACCTTTGTTTAGATACGGCTGGATTGATGGTCAAAATGTCACGTTCCTCCCACACATTAATGGTCCAAACTGTGACTCCAGCTCTGCTGAGATCACCTTCCATGCTAAAGCAGGAGAATTTCTTTCTGATGTCTACTGTTTTGACCCATCAGGTGAGCGCAAAGACAACAGTGTTAAAGAGATAAGTCACTCAAAACTGAATGAAAGCTCTGTCATTATTTTTAAGGAACACTTAACTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAATATTAGGCTTAGATGTCCCCTAAAGTTAAACAGTTCAACTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34175
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000126240 | Essential Splice Site | 302 | 392 | 6 | 8 |
Genomic Location (Zv9):
Chromosome 7 (position 51340665)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 49610901 |
| GRCz11 | 7 | 49883677 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAACAACAGAAAGTAATGCGAAGGAGATGGTTTCAGATGGATCGTCTTG[T/A]AAGTTCATGCAACAGCACTACAGAAGCCATAATTCTTCGATCTTTAATTA
Long Flanking Sequence:
AAAATCCCCCTCAAAAAAGCAGTGATTTGAGTTTTATTATGCCTTTTGCTGCATTTCTGTTTGGCTTTGTTCAAGCAGACTGTTTTGCAAACAGTCCATAATCAATATTTCTGACTCATAAAGTAACAGCTTAATGTTTCTCTCATACCAAAAAGCATGTTTTTTTTCTGTTTATGCACAGTGAAAATTATGTATGCACACAAGTGACACAAGTTTTTTTTTTTTTTTTTTGGTTTAATATATAAACATTATTTTATATTTTTACTGTAGTAATTCAGACAAAGTCATGATATATTCACTTATTATTATATAGTCACATAAACATTTTTTTAATGAATGATTAATAAAAATGCATACTGGTTTATATCAATGACAATATCTTATTAATGTTACTATTTTCAATCCTTACATCTTACAACAGTCAAGGAACCAAGACGAGTGAATGTATTTTCAACAACAGAAAGTAATGCGAAGGAGATGGTTTCAGATGGATCGTCTTG[T/A]AAGTTCATGCAACAGCACTACAGAAGCCATAATTCTTCGATCTTTAATTAGCATCATGTAAATCTTTCAATCTTCTCCCTTCAGCTACTTGGATGATAATTACTGCATTCTGTGTGTTTATTGGAGTCATAGTATGCATATTTGTGGCTATTGGCACTAGAGACAAGTAAGTTATTAGATCAACATTTCTTTCATTTTGTGAATTCATCACATTCATTGGCCTCTGCAGTTTTCAGTTTACTAAATGTAACTCCTTATTTAGGTGGTACGGACCGAGTAAGAGTGCAGACATCACAACTGAAAAGAACAACAAAGACTACAGTAAAACAGAAACGCTGCCGCTGTCAGAGAAAGAGCAGGAGATTGTGGCACTGATGAATGTTACGAACATGAAAAATGGGCAAACAGTGGACATAACAGCTGCAGATGAACACGAAAAAGAATATTTAATGTAAAAGAGGTGAGCTGATTGAAAATGGTGAACACTGAGAGCCTAAGAC
Associated Phenotype:
Not determined