Busch Lab

ZMP

copb1

Ensembl ID:
ENSDARG00000056557
ZFIN ID:
ZDB-GENE-030219-38
Description:
coatomer subunit beta [Source:RefSeq peptide;Acc:NP_001002013]
Human Orthologue:
COPB1
Human Description:
coatomer protein complex, subunit beta 1 [Source:HGNC Symbol;Acc:2231]
Mouse Orthologue:
Copb1
Mouse Description:
coatomer protein complex, subunit beta 1 Gene [Source:MGI Symbol;Acc:MGI:1917599]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa34079 Essential Splice Site Available for shipment Available now
sa34080 Nonsense Mutation detected in F1 DNA Not yet available
sa20952 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa34079
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079042 Essential Splice Site 107 953 3 22
Genomic Location (Zv9):
Chromosome 7 (position 28931196)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 27534135
GRCz11 7 27805328
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGCAAACTTCTTCAGGAGATGATCTTGGTCTGTGATGCCTACAGGAAGG[T/C]GAGTATGAAACATGGACCTTTTATGTCTATTGCTTTATTGTGATAGACTG
Long Flanking Sequence:
ATAAAAAAAATAAATATATATAAAATAATTAATTTCTGTGTTAGCAAACCTGAATCTTCATTAGACATTATTGAAGGTTTCAGTGTCATAGGTTTTTTTCTCAAAGAAGTTTTTTGTTATTATTGTTTTGGTTGAAAGCATACGTGGTTCGTATATATATTTTTCAAGGATACTATAATAAGTTGAAAATTAAAAACATTTCTGACCCTAACCTAATTAGTAAATGTGAGGCTTAAAGTGCAGCTTTTTTTTTATTTCCGTCAAAACAGAAAAAGGAGAAATCAAAGCCAAAACGGAGGCTTTGAAGAAGGTCATCATCATGATCCTGAATGGAGAGAAACTGCCAGGTCTTTTGATGACCATCATCCGCTTCGTTCTGCCCCTTCAAGACCACACAATTAAGAAACTACTCTTAGTTTTTTGGGAAATTGTTCCCAAGACCACTCCTGATGGCAAACTTCTTCAGGAGATGATCTTGGTCTGTGATGCCTACAGGAAGG[T/C]GAGTATGAAACATGGACCTTTTATGTCTATTGCTTTATTGTGATAGACTGAGTGTGTTGTCTTTGTCTAAAAATGGTGTTTGTTATGTGTCTTTAGGATCTCCAGCATCCCAATGAGTTCATCCGTGGCTCCACACTGCGTTTCTTGTGCAAGCTGAAAGAATCCGAACTGCTGGAACCCCTCATGCCAGCAATCCGTGCCTGTCTAGAGCATCGTCACAGCTACGTACGGCGCAATGCAGTCCTGGCCATCTACACTATCTACAGGTGATGAAATAAATTTTAAGGCTATTAAAAAACAAAAAAATAATGTTTTTAAATCAAAATTGAAAGCTTAAAAATGTATTAAATTCACTGAAGCATGTTGTTCTAGGTCTTCAATATATTTTAAATAACATTTAAAATTTTTTAGTGTTTAAAAATCTTACACATAATACTTATAAAAAATTAGTGGTGGTTGTGTAATATTTTTATTTAAATGTAAAATATAATTGGCTTTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34080
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079042 Nonsense 341 953 9 22
Genomic Location (Zv9):
Chromosome 7 (position 28933822)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 27536761
GRCz11 7 27807954
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTTTGAGGGTTTTGACCACTCCTGACCTCGAGGTCCGCAAGAAGACTT[T/A]ACAGTTGGCGTTGGACCTGGTGTCATCCCGCAATGTGGAGGAGGTGTGTG
Long Flanking Sequence:
TTTTGTTTAGGTCTGCCATGCGAACCCCTCAGAGCGAGCTCGTTTCATCCGCTGTATTTACAATCTGCTGCAGTCGTCGAGTCCTGCTGTTAAATATGAAGCAGCTGGAACTCTGGTTACTCTGTCCAGCGCTCCCACCGCCATCAAGGTACAACATTTAGCACTAGGGGTTTTCACCATATACTGTTTTTTGCATGATGTTAAAGTGGACTTACATTATTTAAATGTTTTTTTTCAGGCTGCTGCTCAGTGCTACATTGATCTGATCATTAAAGAGAGCGATAACAACGTTAAACTCATTGTTCTAGACAGGCTGATTGAGTTGAAGGAACACCCGACACACGAGCGTGTACTGCAGGTACACATCAGTTCAGCGTCTCTGTACAACACATTCATTTTGCAAGTCAGTAAACCTGTCACTGTCTTCTGCTCGTAGGACTTGGTGATGGATATTTTGAGGGTTTTGACCACTCCTGACCTCGAGGTCCGCAAGAAGACTT[T/A]ACAGTTGGCGTTGGACCTGGTGTCATCCCGCAATGTGGAGGAGGTGTGTGTCACAAACTGTACTATTATTATTATTATTATTATTATTATTAATTATTATTATTATTTTTTTCATTTTCAAATTCTACTACATTTTCTTTAGGATTCCTTTTTATTATTTTTTTAACATTTTTATTTTTAGTTTCCAAAACAAAATGCATATATAACTTACACTTCATATATGTATAACTTACACAATCTGTCATATAGAAAGAGACTTACAGATCTTGCATATGCTTTGTGTTTACTTTCCTTTAACGACAACAACTATAAACATTAAAAGGGAGTAATTGAGCTACAAATCCTTTAGAAGATGGACTCTATACTGCTCAGTAAGCGCAGTCATTCGAATGAGTTAAACCGAGGCCCTCGCTCTCTGTGGTCGTTAAAAATCCCAGGATGTCCTTCGAAAAAGAGTAGGGGTTTAACCCTGACATCCTGCCAAATTTGCCCACTGGATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20952
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079042 Nonsense 342 953 9 22
Genomic Location (Zv9):
Chromosome 7 (position 28933824)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 27536763
GRCz11 7 27807956
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTGAGGGTTTTGACCACTCCTGACCTCGAGGTCCGCAAGAAGACTTTA[C/T]AGTTGGCGTTGGACCTGGTGTCATCCCGCAATGTGGAGGAGGTGTGTGTC
Long Flanking Sequence:
TTGTTTAGGTCTGCCATGCGAACCCCTCAGAGCGAGCTCGTTTCATCCGCTGTATTTACAATCTGCTGCAGTCGTCGAGTCCTGCTGTTAAATATGAAGCAGCTGGAACTCTGGTTACTCTGTCCAGCGCTCCCACCGCCATCAAGGTACAACATTTAGCACTAGGGGTTTTCACCATATACTGTTTTTTGCATGATGTTAAAGTGGACTTACATTATTTAAATGTTTTTTTTCAGGCTGCTGCTCAGTGCTACATTGATCTGATCATTAAAGAGAGCGATAACAACGTTAAACTCATTGTTCTAGACAGGCTGATTGAGTTGAAGGAACACCCGACACACGAGCGTGTACTGCAGGTACACATCAGTTCAGCGTCTCTGTACAACACATTCATTTTGCAAGTCAGTAAACCTGTCACTGTCTTCTGCTCGTAGGACTTGGTGATGGATATTTTGAGGGTTTTGACCACTCCTGACCTCGAGGTCCGCAAGAAGACTTTA[C/T]AGTTGGCGTTGGACCTGGTGTCATCCCGCAATGTGGAGGAGGTGTGTGTCACAAACTGTACTATTATTATTATTATTATTATTATTATTAATTATTATTATTATTTTTTTCATTTTCAAATTCTACTACATTTTCTTTAGGATTCCTTTTTATTATTTTTTTAACATTTTTATTTTTAGTTTCCAAAACAAAATGCATATATAACTTACACTTCATATATGTATAACTTACACAATCTGTCATATAGAAAGAGACTTACAGATCTTGCATATGCTTTGTGTTTACTTTCCTTTAACGACAACAACTATAAACATTAAAAGGGAGTAATTGAGCTACAAATCCTTTAGAAGATGGACTCTATACTGCTCAGTAAGCGCAGTCATTCGAATGAGTTAAACCGAGGCCCTCGCTCTCTGTGGTCGTTAAAAATCCCAGGATGTCCTTCGAAAAAGAGTAGGGGTTTAACCCTGACATCCTGCCAAATTTGCCCACTGGATTCT
Associated Phenotype:
Not determined