ZMP
barhl2
Ensembl ID:
ZFIN ID:
Description:
barH-like 2 homeobox protein [Source:RefSeq peptide;Acc:NP_991303]
Human Orthologue:
BARHL2
Human Description:
BarH-like homeobox 2 [Source:HGNC Symbol;Acc:954]
Mouse Orthologue:
Barhl2
Mouse Description:
BarH-like 2 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1859314]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa33851 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa33851
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000102661 | Essential Splice Site | 261 | 364 | None | 3 |
The following transcripts of ENSDARG00000070129 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 21032613)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 24720507 |
| GRCz11 | 6 | 24820316 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCTAAACCTCACAGACACACAAGTAAAGACTTGGTATCAAAACCGACGG[T/C]AAGTGTCATATTAATATTTATGAATATTATTTTTGTTATGGCTCACATAA
Long Flanking Sequence:
TTGCATAGCATGTATTTGACATAAAGATAAATTTAACCTAAGCATAAACAGTTTTAGATTTGCGTGTACATCCAAGGCCTGAGAACCACAGGTTCAAAATAAACCTTCTAAATAATAATTACTAAATGTTTAAACTGTTCTCATGTTGAATTATCTACATAAACTGTATTCAATTAATATAGGCCTACACATCAACACGTTTTACATACAAAAGTACAAAATAAAAAAATAATAAAAACATTTTCACTAACTTCCATGCATTAACTTGTTTAGGAACAAAAGAAGAGGGCGATCGGGAAATTTCTAGTTCCAGAGACAGTCCACCAGTCCGTTCTAAAAAACCTCGCAAAGCGCGGACGGCCTTCTCCGACCATCAACTTAACCAGCTGGAGCGCAGTTTTGAGAGACAGAAATACCTCAGTGTACAGGACCGAATGGACCTGGCAGCAGCCCTAAACCTCACAGACACACAAGTAAAGACTTGGTATCAAAACCGACGG[T/C]AAGTGTCATATTAATATTTATGAATATTATTTTTGTTATGGCTCACATAATAATAATAATACTAATAATAACAATAGTAAAATTGCATTTTTTATTTTATTGTTTTGTATCTGCATTTAAATCTGTTTTACAGTTGCCAAAAGTTGAGATTTAAATTTTCGGATTTTATTTAGGCTATTTATCAAAATGTATTATTATGTTATTACTGGTATATATATATTATATTGGTTACGCATTAATTTTATTAAACAGCATTTTTTTAAATAAACGATGCAACCTAATATGAATCAAATAGCTTTCACAGGCTGTCGGAATTTATATTTTATATATATTCACATTAAAGGATTAAAATTTAAATTGTTTAAATTATCATGATCAGTAATAGGCTCAAAATTATCTTCCTTTCCTTCCCAAATGCTTTTTCTTTTTTAGTATTGATTAGATTTTTAAGTTATTACATTTATATAAGTAGCATTATATTCATTATTACATTTATTATT
Associated Phenotype:
Not determined