ZMP
gsx1
Ensembl ID:
ZFIN ID:
Description:
GS homeobox 1 [Source:RefSeq peptide;Acc:NP_001012251]
Human Orthologue:
GSX1
Human Description:
GS homeobox 1 [Source:HGNC Symbol;Acc:20374]
Mouse Orthologue:
Gsx1
Mouse Description:
GS homeobox 1 Gene [Source:MGI Symbol;Acc:MGI:95842]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa33771 | Essential Splice Site, Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa33771
Status:
Mutation detected in F1 DNA
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For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051833 | Nonsense | 192 | 243 | 2 | 2 |
| ENSDART00000124890 | Essential Splice Site | 192 | 222 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 5 (position 71058246)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 67232653 |
| GRCz11 | 5 | 67910364 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATCCGAGAAGCAAGTCAAGATTTGGTTCCAGAACCGCCGCGTAAAGCAC[A/T]AAAAAGAAGGCAAAAGCGGCTCCCACAGAACGGGCGCGCACAACTGCAAG
Long Flanking Sequence:
TTTTGCCCGCTGTGCGTCACTTCTCAGCTTCACCCATCTCCCCCAGCGCTGCCCCTCATCAAGGCTTCATTTCCAGCGTTCGGCACCCAGTATTGCCACTCCGCGCTCTCCAGACAGCACTCCACATCCAGCGGCGTAAACCTCAACAGCGGCTCTGGCTTATATCAAGCCGCTTATCCGGTTCCAGATCCACGACAGTTCCACTGCATATCCATAGGTAAGTGTGTCATTTGTGCATTGAAAAAGTTTTGCAATTAAACTTTTTATGTATATCAGCAACTTAACTTTTTGTTTATTGTTCAACAGAAAATAGCAGCAGTCAACTTCAGAGCAGCAAACGCATGCGCACTGCGTTCACCAGCACGCAACTCTTGGAGTTGGAAAGGGAGTTCACCTCCAACATGTACCTGTCGAGACTTCGGCGCATAGAGATCGCAACTTACCTCAATCTATCCGAGAAGCAAGTCAAGATTTGGTTCCAGAACCGCCGCGTAAAGCAC[A/T]AAAAAGAAGGCAAAAGCGGCTCCCACAGAACGGGCGCGCACAACTGCAAGTGCTCATCCTCCCTGTCCTCCGCCCGGTGCTCCGAGGAAGAGGATGACCTCCCAATGTCTCCCCCGTCATCAGAGAAAGAGGACGCAGACCTGTCCGTCAGCCCGTGAACATGACCATCACCTCAAAAGACTCTGTACGCCACACCTGTGGAATCTTGAATGCAGCCAAAAAGCGACGGCATCTGCGCGCGCCGTCACCTGTACATAGCGAGAAAGGAAGAAACAAAACTTTATATATGTTCGGGGTCTGCGTATCCCTTTTAATGTTGTACATTTGTATACATGTTCAATGTTTGTAGTTTTTTTTCTGAAAACAACTTGCTGATAAGCCCATAGTTCTGCATCCAAATATGATTCCTGTCACCAAAAGGTTTTTAAAAATCTGAGCGGTCCAAAACGAACAAAAATATTATATTATTTACCTACTTTTTAATTTCTATTTGTATTTTT
Associated Phenotype:
Not determined