ZMP
tnc
Ensembl ID:
ZFIN ID:
Description:
tenascin C [Source:RefSeq peptide;Acc:NP_570982]
Human Orthologue:
TNC
Human Description:
tenascin C [Source:HGNC Symbol;Acc:5318]
Mouse Orthologue:
Tnc
Mouse Description:
tenascin C Gene [Source:MGI Symbol;Acc:MGI:101922]
Alleles
There are 10 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20438 | Essential Splice Site | Available for shipment | Available now |
| sa1576 | Nonsense | Available for shipment | Available now |
| sa20437 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa20438
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000026107 | Essential Splice Site | 955 | 1811 | 6 | 22 |
| ENSDART00000078607 | Essential Splice Site | 918 | 1506 | 7 | 22 |
| ENSDART00000131729 | Essential Splice Site | 955 | 1811 | 7 | 23 |
| ENSDART00000137717 | Essential Splice Site | 955 | 1720 | 6 | 21 |
The following transcripts of ENSDARG00000021948 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 30233510)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 27995299 |
| GRCz11 | 5 | 28595452 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCGCCGGGGAGAGATGAGCAGCTTCCCCATCTATGAGACCTTCACAACAG[G/T]TATGAACACTTTTTAAGAACTAGAAATGCTTCCAGGTCATCCAAAAATGT
Long Flanking Sequence:
GTAATAGTAATATGTATTATGTATTAAAAGTAATATGCGTCTTGCATAGCATAAATGTGTGTGCGTGGTTTTTTTAAATAAGCTATAGGGTAAATGAAGGTGATTGGCATGCATGGAGGTTTTTCCATCTAAAAGTATGCAGCAGCTGTTTTGAGCTCACCTGCTTTTCTATTCTGTGTAATTCTGTGTTTTCCCAGCTGTCTCACACTCTTCTCTCCTCTCATCTGCAGTGATTGATGCTCCTAGCCAGGTGGATGTGCGTGACGTGACGGACACAACAGCCCTGGTCACGTGGCTTCAGCCTGTCGCTCAGGTGGACGGCATCTCTGTTTCCTATGGCCCAAACACAGACTCCTCCGACAGGAACACAATCGAGCTTTCCTCCATAGAAACCCAGTACCATCTGGCTGAGCTGTCTCCTGACACTGAGTATGAGGTCTCTCTTATGGCCCGCCGGGGAGAGATGAGCAGCTTCCCCATCTATGAGACCTTCACAACAG[G/T]TATGAACACTTTTTAAGAACTAGAAATGCTTCCAGGTCATCCAAAAATGTATTCTGCTTAAGGCAATGCAATATAAGTGAATACAGTGAGTTGAAAGTTTAAAGGTCCAGTGAAGTGCTTTGATGTGCATTTTATTTTATGTTTATCTGACGTAATCTTAATTGAAAAATGAAGAGAGGGTCGGATATAGAGTAGCTCCTCCCCTTTAAAAAATAACAGCCAATAGTGTAATGTTTTTATCACAGCCGTGATAGAGTGGTTGAGCTCATCAACTCAAGTGCATCAACTGAAAAGCAAATGAGAAGTGTCTTGAAGGAGGCAGGGCATGTCAGATACTAGAGAGCGTTTAATTGGTCAAGATTTGATGAGAAACTAAGTTATGAGGAGACGTGAAAAAAAATTATGAGCTATTTATGCATATCTGACAAACTGTAAGCTTTGAATGTTCATATATAATGTTCATATATAATTATTATAATAATAATTATTATTATTATTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1576
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000026107 | Nonsense | 990 | 1811 | 7 | 22 |
| ENSDART00000078607 | Nonsense | 953 | 1506 | 8 | 22 |
| ENSDART00000131729 | Nonsense | 990 | 1811 | 8 | 23 |
| ENSDART00000137717 | Nonsense | 990 | 1720 | 7 | 21 |
The following transcripts of ENSDARG00000021948 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 30230495)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 27992284 |
| GRCz11 | 5 | 28592437 |
KASP Assay ID:
554-1519.1 (used for ordering genotyping assays)
KASP Sequence:
TAACTCTGGAGTGGAGAAACAGCAGAGCCAACGTCCTCAATTACCGTGTC[A/T]AATACGGCCCACTTTCTGGAGGGGAGCATGGAGAGCTGGTCTTCCCCAGC
Long Flanking Sequence:
GACTACTTTTCACACATATTTGAGTATGATTTACAACATATACTTTTACTCGCACTACATTTTTGGCCAAGTAATGATACTTTTTCTTGATTATGATTTTTCTGTACTCTTTCCTCCACTAATTTTAATTGATAAAGAGTGACAAAAGAAACACTTAAAAGTGCATTTTTGATGTTTTTTATACATTAGATTTAAAAAAAAATACTGAAAAGCCAAAAAACTCAAAATCTTAAATGTGACAGGTGCACGAAAAACAGTTTTTGTCTGTAGTTTCTAGCCTTCAGCAGGTGTGTTGTATACTTAGAGCCGCACTGAAGCAGTTTTGTTTGTCTTGCCTCTGAGGATAATTGTACGTTTACAGGAAGCACTTTCTTTCATCCGCATGTTGACGTGTTTTAGATCTGGATTCCCCAAAGCACCTCAAGGCAATTGAGCAGACAGATGAGAGCATAACTCTGGAGTGGAGAAACAGCAGAGCCAACGTCCTCAATTACCGTGTC[A/T]AATACGGCCCACTTTCTGGAGGGGAGCATGGAGAGCTGGTCTTCCCCAGCGGCCTGCAAGACACCACTCAGGCTAAGATCACTGGTGAGAGGCCAATCTGAATTACACAATAATCCCTCCTTTGGGATTACAAACCATGTTCAGTACAAACAGTCCATAAAGATTAAAAAAAAGGAAGGCGAAAGAGTAAAGTGAGGTTCTGCCGCAATGCGAACCAGACATTGGAGAAGTTTTCCGTTAAACCCATTTTATTTTATTACCTGAAAACGACCCTTCTGCATGTTCAAGACATTGTTTCCTCATCAAATTAGGAATGTGGTTCTCAGATTTGGCCTGAAATAATGGAAGTCTTTCTGAAAAATTATTGGAATTATTTATTGGAAACTCAGAGATTTAAACAGAGATTTAAACAGGCTAATCTAAAGGGATACTTCCCCCAAATGTTAAAATTCTGTCATCATTTAATCTCTTTTCACTTTTTCTGAAGCTTTTTACTTTCT
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa20437
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000026107 | Essential Splice Site | 1635 | 1811 | None | 22 |
| ENSDART00000078607 | Essential Splice Site | None | 1506 | None | 22 |
| ENSDART00000131729 | Essential Splice Site | 1635 | 1811 | None | 23 |
| ENSDART00000137717 | Essential Splice Site | 1544 | 1720 | None | 21 |
The following transcripts of ENSDARG00000021948 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 30203144)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 27964933 |
| GRCz11 | 5 | 28565086 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCCTCTTCTATCAATAAAATAAAAAGTCAATACTATATCGTTGTACCTC[A/G]GGTGTTTGTGAGGCGGCAGAGTGGCAAAGTGGAGTTTTTCAGAAACTGGA
Long Flanking Sequence:
AGTTATAAAACATTATTTGTGGGGCTTGAACTTCACACACACACACTCTCTCTCTCTCTCTCTCTTTCTAGGGATATCAGACTTATTTTAAATCTTATAAAAAGGGTCATAATAGGTCCCCTTTAATGTTTGAATCCCCCAAGTTGCACGTTTTTCTTGTTTTTAAGCATGATAGTACGAAATTTAGTATTTCCACACAAGAACATAAAAACTATTGATAAGCCGTTCAAAAAATCAGTTGTTATGTGTGAACATGGCATAAATAAAAGGTGTACATTTTTCACTTTATTGTAAATAATGCAATAATATAAGGCCAGAATTGTATATTCATTTAATGTATGTATGTATTTTTAAATGAAACGATTATTTATTCTTTGTCAACTATAACTGTAATTGCAATCAGAATATGAGATGTTCTTGCCTCAAAAAATTTACTTTAGAGGCCATAAAAGCCTCTTCTATCAATAAAATAAAAAGTCAATACTATATCGTTGTACCTC[A/G]GGTGTTTGTGAGGCGGCAGAGTGGCAAAGTGGAGTTTTTCAGAAACTGGAAGAACTACACGGCAGGCTTCGGTGACCTGAATGATGAATTCTGGCTTGGTATGTTTAAATTTCTGCACACATCAAATTGCTATTATTGCTCTAGGAAGCACAGAGGCCTAGAGGTATAGTTGATACGGTGTGATTTTCGCAAATGTTGGTCTATAAATCTCATTGTGTGTGTCTGCAGGTCTATCTAACCTCCATAAAATCACCTCCTTTGGGCAGTATGAGCTGCGTGTGGACCTCAGAGATAAGGGCGAGTCTGCATACGCGCAATATGACAAGTTTTCAATCTCTGAACCACGTGCTCGCTACAAAGTCCATGTTGGAGGATACAGTGGCACAGCAGGTGAAGTCTTCACTTTACCTCTGTTTATAATAATTTTAAAGGGACAGTTCACCCAAATATTCTAATTCGGTTATCATTTACTCACCATCCACTCGTGACAAACCTGTTTG
Associated Phenotype:
Not determined