ZMP

si:ch211-102c2.6

Ensembl ID:

ENSDARG00000036481

ZFIN ID:

ZDB-GENE-030131-4648

Description:

transcobalamin-2 [Source:RefSeq peptide;Acc:NP_001116703]

Human Orthologues:

GIF, TCN1, TCN2

Human Descriptions:

gastric intrinsic factor (vitamin B synthesis) [Source:HGNC Symbol;Acc:4268]
transcobalamin I (vitamin B12 binding protein, R binder family) [Source:HGNC Symbol;Acc:11652]
transcobalamin II [Source:HGNC Symbol;Acc:11653]

Mouse Orthologues:

Gif, Tcn2

Mouse Descriptions:

gastric intrinsic factor Gene [Source:MGI Symbol;Acc:MGI:1202394]
transcobalamin 2 Gene [Source:MGI Symbol;Acc:MGI:98534]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa16018	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa16018

Status:

Available for shipment
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Availability:

Order Allele From ZIRC
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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000053001	Nonsense	67	423	3	10
ENSDART00000145631	Nonsense	67	245	3	6
ENSDART00000145736	None	None	180	None	5

Genomic Location (Zv9):

Chromosome 5 (position 28443360)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	5	26198658
GRCz11	5	26798811

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ATCGCTCTGCGGCTCTCCACACAACATAACCTGGACAAAGAAAACCAATA[T/A]CTCAACCGCCTCAAGAAAGAGTTTCAYGAGGATATTGARAAGTACAAATC

Long Flanking Sequence:

GTTTAGGAAGTTCCAATGAAATGGTGAAGTTATAAATCTGCCTGAAAGACCACATCTTACTGTATTGGTAAATATTCTTAAAGGATTACAACTAGGAAGTTGCAGAATATAAGAGACGCTCTCTAACAAGACCTTAATGATCAATCCATCCCACCACTCACCCATATGTTCAATTATTTTATTTCAATAAAAGTTATGATTTTTAGTTAGATTTTTTTAAACAAGAGAAATAAAGGATCAACTATACATATTTATTTTCACAACCTGTTCATATTTACAAAGGTGCCAATATTTTTGACCAAGTCTGTCTGACTGCATGAAATTTCTTACTCTCTGTTTCTTTTTCTAATACCATCAGCATCAGATCACGAAACTCTTCTCCAGTCGCTCAATAAGCAGCTTCTGCGCTCTGTGGACACACAAGACAACCTGCCCAATCCCAGTGTGCACATCGCTCTGCGGCTCTCCACACAACATAACCTGGACAAAGAAAACCAATA[T/A]CTCAACCGCCTCAAGAAAGAGTTTCATGAGGATATTGAGAAGTACAAATCTTTTCAGCTTCAACTTTAAAGCAGCAGTTTCTTATTTCGTTATTTGTTCTTTAAATGTTCAATAGCTTTTGATTCTCTAAATAACATACAGTAATGTTCGGGAATTATTGTATCTGTTACAGTCACATGAGTTGTGTCATTATGCATAAATATAGACTTTTCTATAATTCTACTTCATTTTTCTGCTTTAATTTAATTGCCTTTTGTTCCACTACACTTCTTGTAGATCTCTGAGAAATGGTGAGTTGGTGGTTGGCCGTCTCGCCCTGTACATCTTGGCCTTGAGGTCCTCCTGTCACGATCTGAGTTTACACCTCAATCACAATGAGAAGAATGAGTTCCTCCTAACTCACCTTAAGAAAGAAATGGAGGAAGAGAAACAAAACATTGCATGTGAGAGCAATTTCTTTATGACACAATTTTTTAATCACATCATTTGGGGTTGGTAAC

Associated Phenotype:

Not determined