Busch Lab

ZMP

tmcc3

Ensembl ID:
ENSDARG00000045525
ZFIN ID:
ZDB-GENE-030131-1811
Description:
transmembrane and coiled-coil domains protein 3 [Source:RefSeq peptide;Acc:NP_001038278]
Human Orthologue:
TMCC3
Human Description:
transmembrane and coiled-coil domain family 3 [Source:HGNC Symbol;Acc:29199]
Mouse Orthologue:
Tmcc3
Mouse Description:
transmembrane and coiled coil domains 3 Gene [Source:MGI Symbol;Acc:MGI:2442900]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa13798 Nonsense Available for shipment Available now
sa33475 Nonsense Mutation detected in F1 DNA Not yet available
sa26307 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa13798
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066946 Nonsense 203 456 2 4
ENSDART00000122881 Nonsense 223 476 2 4
ENSDART00000146658 None None 95 None 3
Genomic Location (Zv9):
Chromosome 4 (position 24846425)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 25770094
GRCz11 4 25759292
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGCTGACAACATCGCYCACCTGAAAAGCTCAATGGAGACTGGGTCTGGGT[T/A]GCAGGCGGARGCRGGAGCCCGGATTTTRAGYGGCAGCGCCACAYTGACCC
Long Flanking Sequence:
CGGCCCGCGATCACGATTTGGCCTGGACAGCCTCCAACAAAAGATCCTCAAAGTAAAAGAACAGCTGCGAATTGAGCAAAACCTACAAGATGAGAACGTGGCTGAATATCTTAAACTCATCAACTGTGCAGACAAACAGCAGAGTGGCCGTATTAAACAAGTGTTCGAGAAGAAGAACCAAAAAACTGCCCACAACATCTCCCAACTCCAGAAAAAACTTGAGCAGTATCAGCGCAAGATGAAAGAGTCAGACATCTCCAACGGCACCAAACACGCAACGCCAAAAGACAAAGACAACGACAACCTCAAAGAAACTGTGGTCACCGGAAGCGGACGACATCCACATTTGGACAAAGTCAAAACCATCGGCCCTGGAGTTTCTTTATCTCCGCCGTTCTTCTTTAGCAAGCCCAGGGAAATCGCAAACCTTATTCGCAACAAATTCGGCAGCGCTGACAACATCGCCCACCTGAAAAGCTCAATGGAGACTGGGTCTGGGT[T/A]GCAGGCGGAAGCGGGAGCCCGGATTTTAAGCGGCAGCGCCACATTGACCCCGAAACCTAAATATCCGAGTGATGACGAGTGTTCCACCGAGACGTCAGTTTCTGTGGAAAGTAATGGGCAGGTGACTGGATCGGGCACCACCGGGCAACACAGCGGATCTGCAAGAGAAGCTGAAGTCAATAGCCGACTGCTGGAGGCCTGTGAGGAGATCCGGGAGTTGAGGGAAGCTCAGAGTCTCCTGGCTGACGACATCGAGACACTCAAGAACCAGTTTAAATGTGAAGTGGAGAACATCACGCAGACACTACAAGAGGAGCGATACAGGTCAGTTAATAATTACTGTTGGTGGTCTCGTGAGTGTGGATTCATTTTGGCACATATAGAACTTTAAGAGTTCCCTCTTAGATATTGCTTGATACTGACAGCAGGTTTGGCATGCTGTCCCGGGAGAGAACCCTGAGATAATTGAGCCCAGGGCTCCTGCCTGGTCAATTAGCATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33475
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066946 Nonsense 212 456 2 4
ENSDART00000122881 Nonsense 232 476 2 4
ENSDART00000146658 None None 95 None 3
Genomic Location (Zv9):
Chromosome 4 (position 24846398)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 25770067
GRCz11 4 25759265
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCAATGGAGACTGGGTCTGGGTTGCAGGCGGAAGCGGGAGCCCGGATTT[T/G]AAGCGGCAGCGCCACATTGACCCCGAAACCTAAATATCCGAGTGATGACG
Long Flanking Sequence:
CAGCCTCCAACAAAAGATCCTCAAAGTAAAAGAACAGCTGCGAATTGAGCAAAACCTACAAGATGAGAACGTGGCTGAATATCTTAAACTCATCAACTGTGCAGACAAACAGCAGAGTGGCCGTATTAAACAAGTGTTCGAGAAGAAGAACCAAAAAACTGCCCACAACATCTCCCAACTCCAGAAAAAACTTGAGCAGTATCAGCGCAAGATGAAAGAGTCAGACATCTCCAACGGCACCAAACACGCAACGCCAAAAGACAAAGACAACGACAACCTCAAAGAAACTGTGGTCACCGGAAGCGGACGACATCCACATTTGGACAAAGTCAAAACCATCGGCCCTGGAGTTTCTTTATCTCCGCCGTTCTTCTTTAGCAAGCCCAGGGAAATCGCAAACCTTATTCGCAACAAATTCGGCAGCGCTGACAACATCGCCCACCTGAAAAGCTCAATGGAGACTGGGTCTGGGTTGCAGGCGGAAGCGGGAGCCCGGATTT[T/G]AAGCGGCAGCGCCACATTGACCCCGAAACCTAAATATCCGAGTGATGACGAGTGTTCCACCGAGACGTCAGTTTCTGTGGAAAGTAATGGGCAGGTGACTGGATCGGGCACCACCGGGCAACACAGCGGATCTGCAAGAGAAGCTGAAGTCAATAGCCGACTGCTGGAGGCCTGTGAGGAGATCCGGGAGTTGAGGGAAGCTCAGAGTCTCCTGGCTGACGACATCGAGACACTCAAGAACCAGTTTAAATGTGAAGTGGAGAACATCACGCAGACACTACAAGAGGAGCGATACAGGTCAGTTAATAATTACTGTTGGTGGTCTCGTGAGTGTGGATTCATTTTGGCACATATAGAACTTTAAGAGTTCCCTCTTAGATATTGCTTGATACTGACAGCAGGTTTGGCATGCTGTCCCGGGAGAGAACCCTGAGATAATTGAGCCCAGGGCTCCTGCCTGGTCAATTAGCATGAAAAGAGGTTCTGTGATCAAGTAGGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa26307
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066946 Nonsense 349 456 3 4
ENSDART00000122881 Nonsense 369 476 3 4
ENSDART00000146658 None None 95 None 3
Genomic Location (Zv9):
Chromosome 4 (position 24845368)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 25769037
GRCz11 4 25758235
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCAAACAGGAGCTCGCGAGCATCGAGGAGAAGATGGCCTATCAGGCTTA[T/A]GAACGAGCTCGAGATATACAGGTATAATCAAACATGCATGTTCAATAGCA
Long Flanking Sequence:
GGAGATGGGGTGGATGGGGGATTTTTGAAGTAGGGCGAAAATGGGCTATTTATTGTAGGCTAGGATTAATCTGATCGTTGTATCAATGATTGCGGATGAGAGACCAGCCACGATTAATCATATCACATGGCCCTCTTGAAATTAGTTTAAAAAACTTCACTTAGCAGGCATGCGCAATGCACCATATCAGCTATTGGCTAGAAATGTTAACGCTTCTAATGCAATCAAATACTTTTCTTGCCTCTTGAGTCCATTCAAATCCTGATTTATAGATATTTAAAGTATAAACCAATATTAACATTAAAACCTATTACCTAAGATCCTACTAAAAAAAAAAAAACAGCACATTGGCTTAAAGTAAATTTTGATGTTGTTGTTTTTATAAGGTGTGAGCATCTAGAAGACCAGCTGAACGACCTGACAGAGCTCCATCAGAATGAAACCGCAAACCTCAAACAGGAGCTCGCGAGCATCGAGGAGAAGATGGCCTATCAGGCTTA[T/A]GAACGAGCTCGAGATATACAGGTATAATCAAACATGCATGTTCAATAGCACTTCTGGTGCTGACATCATTTTCATTGATCTGGGGCCTGCACTATCCCAGCAAGCACGGAACATTAACATGACGTCAGGTTGACCTTGAACCCCAACGTCGTGGGATGTTGCATTTTTTTTGGAAATAAAGATCAGGTTGATGTCAGGCTGACCTCATGATGTTGTGTGGGCGTTACCAATATGATGTTTATCAGACATTGGATTTTGGTTGCCTTACCTGATGAATAAATGTCAGTATTTGACATCAATATGACGTTGGTTTAAGATTTGGGCTCATGGATTTGGCTCGTGATGTTGGATTTTGGTCACTTTCCAACAGAACCTTAAATCAACTAAAAAACTTGTCATTTGATGTTGTTATTATATGTTAAAAGAACATTGTCTTTAGATGACTGTGACCTAAATCTAACCCAAAATTAACGTCTTATGATGTTGTGTGTCTGCTGGGA
Associated Phenotype:
Not determined