ZMP

prdm4

Ensembl ID:

ENSDARG00000017366

ZFIN ID:

ZDB-GENE-041210-131

Description:

PR domain zinc finger protein 4 [Source:RefSeq peptide;Acc:NP_001116215]

Human Orthologue:

PRDM4

Human Description:

PR domain containing 4 [Source:HGNC Symbol;Acc:9348]

Mouse Orthologue:

Prdm4

Mouse Description:

PR domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:1920093]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa33430	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa33429	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa33430

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000110199	Essential Splice Site	442	822	5	10
ENSDART00000147629	Essential Splice Site	443	780	5	11

Genomic Location (Zv9):

Chromosome 4 (position 13987459)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	14923312
GRCz11	4	14922067

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTGTGGAACTGACAGACTGGTCAGACAAGGACACCCCTCAAATATGGAAG[G/A]TCCTTGCAACATATTTCTAAATAAACCTAAACCGCTTAATTCATTATTTA

Long Flanking Sequence:

ACTCTGCCACTGTTTTGGGATCTAGCACAATGAAAAGCAGTCAGTCTCATTGAGTCTGCATACATTAAGACTGCTGAAACACCTTGACATGGAATTATTATGTACAATTCAGTTTCAAGGTTTGCTTTTTTAGCTTTAATTTGTTTGTACATTACAATGTGTCCTGTTTAATGATTCAGAAATGAAGACTACTATATATTTTTAGAATGTTTAACAGATTTAACATACTAAAAGGGCACTAGGCTTAACAAAAGTTTAAATTCAAAATTAAGCATTTATTAAAATAATTCTGCAGTATTCTATGAAACAATAGGAATAGTCAGTTTTGATTTTGCGTTTTGATTTTGAAAAGGCATTTTTGTTGTTGTTGTGGTTCTCTAGGTGTGTTTTCTAGAGAGTCCATACCCTCCAGAACCTGCTTTGGGCCGATGGTTGGACAGCACTGCAGCAGTGTGGAACTGACAGACTGGTCAGACAAGGACACCCCTCAAATATGGAAG[G/A]TCCTTGCAACATATTTCTAAATAAACCTAAACCGCTTAATTCATTATTTATGGATGCACACTGCTGATCAGACAACAGTAAACGTTTTTATAATACAAAAGATTGAGATTTTCAGATTGGTATTATTTCTAGTGGATTGTGTAAAGACTGAAAGGGATAGTTCACCTAAAGATTTACATTGATTCACCCTCAAGTGGTTTCAAATCTTTTTGAGTTCCTTTTTTCTGTCGAAATACAAAAGAAGATATTTTGAAGAATGTTAGAAACCAGCAATCATCAACCTCAATAGTAAGAAAAACAAACTGTATGGAAATCAATGGTTATGTTCTCAATATTACTGTTTTAGAGTTAGTAAATGATTCAATTCAATTCTTCTTTATGTCTATAGTGCTTTTACACTGTAGATAGTGTCAAAGCAGCTTAACGTAGAAGTTTTAGTCATTTGAAACTGCTTCAGTCCAGTTTTAGTTCAGTTTAGTTCAGTTCAGCGAGGTTTAATT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa33429

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000110199	Nonsense	736	822	10	10
ENSDART00000147629	Nonsense	694	780	11	11

Genomic Location (Zv9):

Chromosome 4 (position 13983342)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	14919195
GRCz11	4	14917950

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCCAAAGTGTGACAAGCAGTTCCTAAAGCCTGACCATCTTAAAAAACACT[T/A]AAACTCTCATGAAGGGAAGCGGGACTTCATCTGTGAAAAGTGCAACAAGG

Long Flanking Sequence:

CACTGTAAGGATATATTTATTTTATTTTTTTAAATATTTAATGTCAAATTTAATTACAACATTTATAACAACAAAAATTTGACAATAAATATTTTATTGTCTTATTTTATATATATATATATATATATATATATATATATATATATATATATAGTATATTAAATTATATTAAAATACAAAAATATATATTTGTATGTTTAAAAAATTACGCATTTATTATTAAATACGTATTTTTTGGGGGTGGAGAATAAACTCACAAGTTAAAATATCTACACGTATATAAAGATCCACCACATTTTACTTATGCATACAAAATTAAACAGAATATTTCCTACTGTGATTACTGATTATGAGTATTATTAACATATATTCTTGGTCTACTTACAATATATTCATCTAAACAACTCTATATTTCTATTTTCTCCGTTCCAGAGACCGGCAGATAAACTGTCCAAAGTGTGACAAGCAGTTCCTAAAGCCTGACCATCTTAAAAAACACT[T/A]AAACTCTCATGAAGGGAAGCGGGACTTCATCTGTGAAAAGTGCAACAAGGGTTTCCTCACTAAATACCACCTCACACGCCACCTCAAAATCTGCAAGGGCCCAAAGATCGGCCGGGGGGCCACACAGGGTGAGGAAGAAGAGGAGGAAGATGAAGAGGAGGAAGAAGAAGAGGACGAAGAGAGAGAAGCTGAGATCCATCCAGCCAATCAGGAGGAGTGTGCAATCGGAATGGGTGGTTATGCTTCTGAAAAAAATATGTAACTTATACAGTGCGTAACAGGATGAATCCAAGCCTATTTATTATTCCTTTTTGTTCTGCCCATTAGACGCCTTTAAGTCCTTTTGCCAAACTTTATATATCATTCACCAACAGAAATCTGTAGATTTTAATTGAGTTAAAAAATACATTACAAAGTTTCAATGTTAAAGGTGCAGTAGGTAATTGTCTTCAGAAGCATTTTTTGTTGTGCTGGTTGAAAGTCTCTTCACAGTCAAATAG

Associated Phenotype:

Not determined