ZMP
cntn1b
Ensembl ID:
ZFIN ID:
Description:
contactin-1 [Source:RefSeq peptide;Acc:NP_001014814]
Human Orthologue:
CNTN1
Human Description:
contactin 1 [Source:HGNC Symbol;Acc:2171]
Mouse Orthologue:
Cntn1
Mouse Description:
contactin 1 Gene [Source:MGI Symbol;Acc:MGI:105980]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10944 | Nonsense | Available for shipment | Available now |
| sa40254 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa38430 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa33426 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa30847 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa33427 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa10944
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067166 | Nonsense | 116 | 1031 | 5 | 24 |
| ENSDART00000133157 | Nonsense | 116 | 1039 | 5 | 24 |
Genomic Location (Zv9):
Chromosome 4 (position 12807149)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 13743776 |
| GRCz11 | 4 | 13742625 |
KASP Assay ID:
2259-4687.1 (used for ordering genotyping assays)
KASP Sequence:
GGAAACCTGGTCATTACAAACCCAGAAAAAAACAAGYATGCTGGRAAATA[T/A]GTATGTGTGGCCAAGAACGTGTACGGCACCGTCATGAGCRAAGAGGCCAA
Long Flanking Sequence:
GAGAAGAGGGTGGGCGGATTAATCTGTGCCTTTGAAAACACTATTGGTTGGGTTTAGGGAAGGAGCAGGTGCACTCACGAGAGAAATTTAAGATCTCAAAAAATATACACAGGAGCCTTTGGTGGATTCGCAAAAATCAAAACTGCAAAGCAACATACCTCCTGGGACGTATTTGGCACTCTCGAAAAATATATATAGGGGTACATTTTCAGAATGAGCCTGGGTTGGTTTTTCTATGATGCTGAAACCTAAAATTGTAAGAGTTCCAGTCTTCTGATACTCAGCTGCTATTGGCTTTGTGTTTGTGGGGCGGGGCTTACCCATAGCTCAATTGGAAAAAGTTCTGTAGCAGAAGTTCATTAATGAAATGCCATACTTCACAGGTGGTGGTTAAACAACTGGCAAATTAAGCTGATGGAGCAGCCAGATGAGCACTTCAGCCTGGTTGGAGGAAACCTGGTCATTACAAACCCAGAAAAAAACAAGCATGCTGGAAAATA[T/A]GTATGTGTGGCCAAGAACGTGTACGGCACCGTCATGAGCAAAGAGGCCAACGTCAAGTTTGGATGTATGTGAGGAATTGGACTTGTTGGGTTTGTGTTAATCATTTTTTCCCCTCTGTTGCTTAGTCTTAGTTGTACTTTGTTCTGCAGACCTGAACCAGTTTCCTACAGATGAGAGAGAGCCGGTGAATGTGAAGGAAGGACAGGGAGCTGTTCTGCTGTGTACACCTCCCTCTCGCTATCCAGGTAAGATCTGCTCATATATATCAGCAAAATTAACCTTAATATTGTAACAATTAAAAGATCGCTGTTAGATTTCAACAAGGGCTACTATGATAAGGCTCATTTGGCATTTGGGATTCTGTCTCAACCCTAAATAATGACAAATAAGATTTAGTTCAAATTAAGCATTAGTAAAATAAGTATTGAAGGCGTCACTATTTTTCTTAGAAAACATGTTTCTAAAAGTGCTGTTGACTTGACATTTTCACCTGATGTTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40254
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067166 | Essential Splice Site | 137 | 1031 | 5 | 24 |
| ENSDART00000133157 | Essential Splice Site | 137 | 1039 | 5 | 24 |
Genomic Location (Zv9):
Chromosome 4 (position 12807214)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 13743841 |
| GRCz11 | 4 | 13742690 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAACGTGTACGGCACCGTCATGAGCAAAGAGGCCAACGTCAAGTTTGGAT[G/A]TATGTGAGGAATTGGACTTGTTGGGTTTGTGTTAATCATTTTTTCCCCTC
Long Flanking Sequence:
CAGGTGCACTCACGAGAGAAATTTAAGATCTCAAAAAATATACACAGGAGCCTTTGGTGGATTCGCAAAAATCAAAACTGCAAAGCAACATACCTCCTGGGACGTATTTGGCACTCTCGAAAAATATATATAGGGGTACATTTTCAGAATGAGCCTGGGTTGGTTTTTCTATGATGCTGAAACCTAAAATTGTAAGAGTTCCAGTCTTCTGATACTCAGCTGCTATTGGCTTTGTGTTTGTGGGGCGGGGCTTACCCATAGCTCAATTGGAAAAAGTTCTGTAGCAGAAGTTCATTAATGAAATGCCATACTTCACAGGTGGTGGTTAAACAACTGGCAAATTAAGCTGATGGAGCAGCCAGATGAGCACTTCAGCCTGGTTGGAGGAAACCTGGTCATTACAAACCCAGAAAAAAACAAGCATGCTGGAAAATATGTATGTGTGGCCAAGAACGTGTACGGCACCGTCATGAGCAAAGAGGCCAACGTCAAGTTTGGAT[G/A]TATGTGAGGAATTGGACTTGTTGGGTTTGTGTTAATCATTTTTTCCCCTCTGTTGCTTAGTCTTAGTTGTACTTTGTTCTGCAGACCTGAACCAGTTTCCTACAGATGAGAGAGAGCCGGTGAATGTGAAGGAAGGACAGGGAGCTGTTCTGCTGTGTACACCTCCCTCTCGCTATCCAGGTAAGATCTGCTCATATATATCAGCAAAATTAACCTTAATATTGTAACAATTAAAAGATCGCTGTTAGATTTCAACAAGGGCTACTATGATAAGGCTCATTTGGCATTTGGGATTCTGTCTCAACCCTAAATAATGACAAATAAGATTTAGTTCAAATTAAGCATTAGTAAAATAAGTATTGAAGGCGTCACTATTTTTCTTAGAAAACATGTTTCTAAAAGTGCTGTTGACTTGACATTTTCACCTGATGTTGGTAACAAGCAAATAAATCCACATATGGATCTAATTAGTTTACAAATAAAGTTATGTGTAATAAAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38430
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067166 | Nonsense | 449 | 1031 | 12 | 24 |
| ENSDART00000133157 | Nonsense | 457 | 1039 | 12 | 24 |
Genomic Location (Zv9):
Chromosome 4 (position 12812560)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 13749187 |
| GRCz11 | 4 | 13748036 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAATGGACGTGTGGTCATAGAGTGCAATCCCCGTGCTGCTCCCAAACCC[A/T]GATTCATCTGGAAACGAGGCTCGGAGCTCCTGAGCAACTCCTCAAGGTCA
Long Flanking Sequence:
GACTCTCAGATGTGTTGCTGTTGGGAAACCAATACCATGGATACGTTGGCTAAAAGACGGCTATTCGGTTAATATCCTGCTTTATTTGCTGTCTTAAACCCAAACGAAAACTCTTCATGTTGTTTTATGTATACATACATGTTTGTGTAAATTTTTTTTTCTCATTCACAGTATGGCAAAGGGGAGCTGAAGTTTTCCAGTCTCACGTTTGAGGATTCGGGCATGTATCAGTGCATTGCTGAGAATGAATGGGGAACCATCTACGCCAATGCAGAGCTTCGGGTTGTCTGTGAGTTTTTCAATCCTTCTTTACTCTCATTATTGATTACAATTGTTTTCCGAAGGGAACATGTAATTATAGCTGAAGGTTGAGTTTGTTCAATGGTCTTTTCTCAGCCTGTGCTCCGACGTTCATATATAACCCAGTGAAGAAGATTCTGCTTGGGGCTGAAAATGGACGTGTGGTCATAGAGTGCAATCCCCGTGCTGCTCCCAAACCC[A/T]GATTCATCTGGAAACGAGGCTCGGAGCTCCTGAGCAACTCCTCAAGGTCAGTCTTAAGAGCATGCATTTACTGTACTTAGGATGGAATATAATGTTGTGGAGGCTGTCATTCACCTTTATTTTCAGGATATTCATTTGGGACGATGGAAGTCTGGAGATTCTGAATGCAACAAAAAGTGACGAGGGCTCATACACCTGCTATGCTGAGAATGATCGTGGCAAATCCAACAGCACTGGGACCCTCACTATTACTGGTGAGAGAACATAACAAACAAAAAAAATTCACATTTATAAATAATTAATGTGTTTATAAGTAATATAAAGTGCCACATTTATATCTCCTCAATTTTTTCAGAGGCCACCAAGATCACAGTTGGCCCATCAAACTCTGAGGCAGCTGTAGGGGATACAATAGTTCTCCAATGCTCTGCATCCTATGATCCCAGTCTGGACGTCACCTTCATCTGGACTGTCGATTCATACATCATTAACTTCTACAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33426
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067166 | Essential Splice Site | 712 | 1031 | 18 | 24 |
| ENSDART00000133157 | Essential Splice Site | 720 | 1039 | 18 | 24 |
Genomic Location (Zv9):
Chromosome 4 (position 12816010)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 13752637 |
| GRCz11 | 4 | 13751486 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAACTAATGTTTGCATCCATCATTGTCTCACCCAGACTTTTTCTTGTTTT[A/G]GGGCCAACAGTAGCTCCTTCTGACGTCATTGGACAAGTGGGAATAAGCGG
Long Flanking Sequence:
TGGAACAGGTAAAGGATGAGTAAATGATCACAGAATTGTCGTTTTTGGGTGAACTATCCCTTTTAAGTTATTGTAAAGAGAATTAGTTTGTCTGTGTGAGAAACATTATTGTAATCTCAACACCAAACGTGTCATACCATAGAAATCAAGTAATAATTTTGGAAATGATGTCCAATTTCTTATGCAGACTGATACATTTTTTTCATAAGTCCTAAACACTTTTAAGAAGAGAAGGGGATTACTTTTGTGTTTTTTGACTCTCAGTGTGTGTTTTCCCAGCTCCTGCGTTTCTGAATGGATCTACAGAGTCAGCCACTGTAGTTGACCTGTACCCCTGGATGCAATATGAGTTCAGAGTGCATGCCATCAATGAATTCGGAGCTGGTGAAAACAGCCGTCCGTCCATTAAAATCAAGACATGGGATGCCAGTAAGTTTGTATAGTAATTAATAACTAATGTTTGCATCCATCATTGTCTCACCCAGACTTTTTCTTGTTTT[A/G]GGGCCAACAGTAGCTCCTTCTGACGTCATTGGACAAGTGGGAATAAGCGGAGAGTTGATCGTGACTTGGAATGTGCGTGTTCATGTGCTTTAATGCTTGATTTGTTAATTAGCAGGCAGTTGTGGATTTCTAATGTGTTCCTTAATTCTATTGCAGCCTGTGAAACCTCAGTTTTTCTTTGGGAAGAAGTTTGGCTATGTTGTGGCGTTCAAGCAGCATGAGGATTATGAGTGGAAATGGTCAACCGTGGAGGATCCCGAGACCAGACGTTATGTGTACAAAGAGAGCATGACACCAGATACTGAAATACAGATCAAAGTCAGCACCTTCAATAACAAAGGAGAAGGACCCGCAAGTCTTATATCAGTGGTTTACTCACCAAGAATAGGTGAGAATTTTATATATGTATGCAGGTATTTTTAAATGTAAATGTATGGATTTAAAATGTATGGTTCCCAGAGATGGGTTGCGGCTGGAAGGGCATCCGCTGCGTAAAAACG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30847
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067166 | Nonsense | 887 | 1031 | 21 | 24 |
| ENSDART00000133157 | Nonsense | 895 | 1039 | 21 | 24 |
Genomic Location (Zv9):
Chromosome 4 (position 12818193)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 13754820 |
| GRCz11 | 4 | 13753669 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAACTGTAAACCAAACCCGTCTGGAAAACATGCGACCTGATTCGCATTA[C/A]CTTATTGAGGTGCGAGCGTTTAATGGAGCAGGACTGGGACCACCAAGCGA
Long Flanking Sequence:
TAATGAATTTAATTATTTTATAACTATCTTGTTCTCATTTAAAGTATAGTTTTCAATGACAGAAGTAGTATCTCTTATTATTTATAAATTTTCCATCCATCCATCCATCTAATGTATTTGTTTATGTATATTCTTTTTTAACTGATTTACTTAAAAAAATGCTCAGTCAAGGCATCCTTTATGTATTGTCCCCCTCAGCACCGACTGAAGCCCCACTAGATGTGTATGCCCGTCAGGTCACCTCCACAGAGGCTTTAGTCTGGTGGTTACCAGTCTACCAGGCACCACCAATGTGGGTCGACGGATACCAAGTTAGTTTGGGTCTTAAGTGAAATAACTTGGAATAACCAAGATGTCCTGCTCCTCATGTGTCTTCACTTGATTTTGCAGATACGCTACTGGAGAAAATACGATGATAATGAAGCTGCTGCATCTCGAGTCATTGTTCACAGAACTGTAAACCAAACCCGTCTGGAAAACATGCGACCTGATTCGCATTA[C/A]CTTATTGAGGTGCGAGCGTTTAATGGAGCAGGACTGGGACCACCAAGCGAACACTGTGAAATGTTTACCAGAAGACCCCGTAAGATATCTTTGAAGTCACACATTTTTATTATTGCTGTCATATTTGAAATGAGAATACTGTATATGTATGTTGTGCTTTCAGCCCCAAGTCGTCGTTTGAGAGTTTACAAGTATGTCAGCTTTACACGCAAATGGCTGTATCTGTATTGGGATCACATCTATAACTACTGGAATGAGTCTTATGTGGAGGGGTACAAGGTGAGCTGATCATAGTTAAAGTTTTATTAGAAAAATCTGTTGACAAATGACTTGTTAGTCCTGTTATCTTTTGAACAATTTAATTTGTTATTCAATTTTATATATTTTTGTTTATTTATTACTAGAATTTGAATTATATTATCCTTGTTTTAATGGATATTTATAAATTTATTTTTTATTTTATTATCGCAACCTAAATTTTATTTTATTTTAATACAATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33427
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067166 | Nonsense | 920 | 1031 | 22 | 24 |
| ENSDART00000133157 | Nonsense | 928 | 1039 | 22 | 24 |
Genomic Location (Zv9):
Chromosome 4 (position 12818374)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 13755001 |
| GRCz11 | 4 | 13753850 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAGAATACTGTATATGTATGTTGTGCTTTCAGCCCCAAGTCGTCGTTTG[A/T]GAGTTTACAAGTATGTCAGCTTTACACGCAAATGGCTGTATCTGTATTGG
Long Flanking Sequence:
TGTATTGTCCCCCTCAGCACCGACTGAAGCCCCACTAGATGTGTATGCCCGTCAGGTCACCTCCACAGAGGCTTTAGTCTGGTGGTTACCAGTCTACCAGGCACCACCAATGTGGGTCGACGGATACCAAGTTAGTTTGGGTCTTAAGTGAAATAACTTGGAATAACCAAGATGTCCTGCTCCTCATGTGTCTTCACTTGATTTTGCAGATACGCTACTGGAGAAAATACGATGATAATGAAGCTGCTGCATCTCGAGTCATTGTTCACAGAACTGTAAACCAAACCCGTCTGGAAAACATGCGACCTGATTCGCATTACCTTATTGAGGTGCGAGCGTTTAATGGAGCAGGACTGGGACCACCAAGCGAACACTGTGAAATGTTTACCAGAAGACCCCGTAAGATATCTTTGAAGTCACACATTTTTATTATTGCTGTCATATTTGAAATGAGAATACTGTATATGTATGTTGTGCTTTCAGCCCCAAGTCGTCGTTTG[A/T]GAGTTTACAAGTATGTCAGCTTTACACGCAAATGGCTGTATCTGTATTGGGATCACATCTATAACTACTGGAATGAGTCTTATGTGGAGGGGTACAAGGTGAGCTGATCATAGTTAAAGTTTTATTAGAAAAATCTGTTGACAAATGACTTGTTAGTCCTGTTATCTTTTGAACAATTTAATTTGTTATTCAATTTTATATATTTTTGTTTATTTATTACTAGAATTTGAATTATATTATCCTTGTTTTAATGGATATTTATAAATTTATTTTTTATTTTATTATCGCAACCTAAATTTTATTTTATTTTAATACAATTTTGTTTCAGTTTATTATTTAAAGTAATTATGCACACAGCTGAAAGGGCATCCGCTGTGTAAAACATTTGCTAGATAAGTTGGCGGTTCATTCTACCTTGGGCCCCCAGATTAATAAAGGGACTAAGCCGAAAAATAAATGTTTACTTATGTATATTGATATCACTGAAAAAGGGTGTTTTT
Associated Phenotype:
Not determined