Busch Lab

ZMP

brd4

Ensembl ID:
ENSDARG00000078904
ZFIN IDs:
ZDB-GENE-030131-267, ZDB-GENE-030131-267
Description:
bromodomain-containing protein 4 [Source:RefSeq peptide;Acc:NP_001104751]
Human Orthologue:
BRD4
Human Description:
bromodomain containing 4 [Source:HGNC Symbol;Acc:13575]
Mouse Orthologue:
Brd4
Mouse Description:
bromodomain containing 4 Gene [Source:MGI Symbol;Acc:MGI:1888520]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa8905 Nonsense Mutation detected in F1 DNA Not yet available
sa855 Nonsense F2 line generated Not yet available
sa33315 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa8905
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114343 Nonsense 201 1444 4 21
ENSDART00000115117 Nonsense 201 1444 6 20
Genomic Location (Zv9):
Chromosome 3 (position 53836543)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 52943858
GRCz11 3 53198521
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGACTGCAAGCCCTCAAACACGTGGCCTTTCTAATCTTACCCCAGGGCCA[C/T]AAACTAGAGGACCACCACAGGGTCCACCTACTTTACCTCCCCAGCCTATA
Long Flanking Sequence:
GCTGTGTATTTAAAAACAATTGGGCCATTATATACTGTATATACTGTTTTGAGAGTTGTTTACATTGTGATAGTTTGTAAATGCCATATGTATTTGCTGTTTTTATTCCTTTCTTGCTTATCAAATGGCTATCAAATATATTAAAACAAGGATTTTCTACAACAGTAAGCTTCATAAGTTGTTTTGTTTGGCTAAAAGTGAATAGAAGTGAACAAGACCAGATGTCTTGACACATTTAAGTTATAAATGCCATTCCATACTTACTTGGAAAAATAGGATGAATAGGTCATGGAAGTTCAGTTTTTTAGTCAGTGTAAATCAGAGAAATTTAAACAGTTTGGCTCAAAGTGGGAACCCCTGACTACAGCAGAAACATTTTATTTTTTTTTTGAATCTCTCTTTCTGTGTCATTAGACATGAACATGAAGGTCGGACCTGTTCTGGAGCCTTTGACTGCAAGCCCTCAAACACGTGGCCTTTCTAATCTTACCCCAGGGCCA[C/T]AAACTAGAGGACCACCACAGGGTCCACCTACTTTACCTCCCCAGCCTATAGTGCAAATTCAAGCCTTGCCCCCTCGAGTGCCCCCTTCGCTTCCCACAATCCCTCTCCACGCGCCTCAATTAGGGCCGCCTTTTTCGTTGGGCCCCACTGACTGCAACCCACCGGCCCCCATCATAACGGCTGTGCCTCCCCCCACTCAAACCGCCCTGCCACCTGTGCACATTCAACAGAGCGCTGCTCCACCTATTCTACAAACTCCCATCTCAATACCTAACAAAGTAAGTTTAGCATTCGACATGGCATTCAGTGTCTGTTTTTGTTTTTTGAAGTGCGTCTGACTCACCTGTGTTATTTCACTTCTGCACAGAGAAAAAGTCAGAAAAGGAAAGCAGACACAACGACACCTACGGCAAACGACCAGCTGAACGAGTCCTCACCCGCCGAGTCAAAGTCAGGCAAGACTCTTCCACGCCGGGATAATACACGACCAAGCAAATTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa855
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114343 Nonsense 880 1444 11 21
ENSDART00000115117 Nonsense 880 1444 13 20
Genomic Location (Zv9):
Chromosome 3 (position 53844558)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 52951873
GRCz11 3 53206536
KASP Assay ID:
554-0758.1 (used for ordering genotyping assays)
KASP Sequence:
CTGCTCCACCTCACCTCAACGCTCACCCTCCAGGAGGCCCAGTGTCACCT[G/T]AGACGCATCCGTTCCTCAACCAGCACCCCATCCTTCCATCCCCAGGTGAG
Long Flanking Sequence:
AAGGCACTTCCTCCGATTCAGGCAGCAGCAGTGAGTCCAGCTCCTCAGAAAGTGAAGACTCTGAGACAGGTGAGCCCTGCAGCTCTGTCAAATCTAACTGCATTCACGATGATAAATGATCCGAGAAACTGCAATGCATAAAGAGTCATCTCTTCCCTATCTCAGGGATGGCTTCTAAGCCAAAGAAGAGAGGGAGAGGTGAAGGAAAGAAGGCTCATCACCAGACCACGGCTCCAGGCATGCCTCTGCCGCAGGTCCCCCTTCAACCCCAGACCCCTGCTCTGCAACCCAGCATTCAGCTGAAGCAGCAGCAGCCGCAGCATCCCTCTCCAGCTGCTTACATGCCACCTCCCGTCACGGCTCTGGAGCCCTCGCAGCTCCTGGAAAACCCCTTTGACCCTCTGGCTCACTTCATGCACCTTCCCCACCACGCAAACGACTCGTCCTCTCCTGCTCCACCTCACCTCAACGCTCACCCTCCAGGAGGCCCAGTGTCACCT[G/T]AGACGCATCCGTTCCTCAACCAGCACCCCATCCTTCCATCCCCAGGTGAGTGGACAACTGCTGTGTATTACTGCAAGCTACTGTCCAGAACAGGTTTATTGTAGGGCTGCACAATATATCGTTTTAGATACAAATTATCACAATGTGCGAATCTGCAGTAGTTACATCGCAGTGTCTGCAATGATGAATTGGCATTAAAATTATAATTTAAATTGTCTGTGCATATGAGATGATCATATTTGTAGTTTAACAAAGATTAATTGTGTTTATACAAGTAAGTCAACATTTGAAGTGGAAAAAAATTGAGCAGAACAATGGGTGGTTTTGAGTAGTTTCAGGACATCTTTAATTTTTGTGGTGTTTTGATCCACTTCAGATGTTGACTATTTTGTATTCAACAATGTTGGGCAAGCTTAACTACATTTCTCAGTACTGTGGCGGTAGCGTCACTACTTTTTAAATTAAAAAGCTTTTCAGTCGTGAAGCTATTATTTTACTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33315
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114343 Nonsense 1072 1444 12 21
ENSDART00000115117 Nonsense 1072 1444 14 20
Genomic Location (Zv9):
Chromosome 3 (position 53849562)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 52956877
GRCz11 3 53211540
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAGACTCAAGTGCAGCCGCAGCAGCCAGCGCCACACCAGCCCTCGCCA[C/T]AGCTCTCACAGCACCAGGCCAGACACATGCAGCAGCTCGGCTTCCCTCAA
Long Flanking Sequence:
CACGGCCCAGTAACAGGGCAGCCCCACTACCTCCTAAACCTCTGCAGCAAAGCACGTCCCAACAGCAGCCACCACCCCAGCAGACCCTGGTGCCCCCACAGCAGCTTCAGCCGCAGCAGCAGCAGCCTGCTCCACCCCAGCAGCAGCACCTCCCTCATCACCCGCTACACGCCCCACAGCAGATGCGCCCAAGGCCGCTATCCCCTCCTACGCTCACACCCCAAGGCCTGCTCTCCTCTCAGCCCCCTCAGATGCTGCTGGAGGATGACGAGGAGCCTGTGCCCTCCATGTCCCTGCCCATGTACTTGCAGCACCTACAGCCCAACCGACTACAGGCAACGCCGACATCACTGATGCAGTCGCTGCAGAGCAGGCCTCAGCCGCCAGGACAGCCGTCTCTGCTGCAGTCGGTGCAGGTTCAATCTCACTTGCCCCCTCCGCAGCTTCCCGTTCAGACTCAAGTGCAGCCGCAGCAGCCAGCGCCACACCAGCCCTCGCCA[C/T]AGCTCTCACAGCACCAGGCCAGACACATGCAGCAGCTCGGCTTCCCTCAAGGCCCGCTGCAGACCGCACAGACGCAGCCCGGTCAACACAAAGTGTCCATGCCCTCCACAAAAGCACAGCAGATCATCCAGCAGCAGCAGGCCACGCAGCATCACTCGCCACGCCAACACAAAGCTGACTCCTACAACTCCGGTAACAACATAACACACACACACATACAATTGAAATCAGAATTATTTGCCCTCCTGTATATATTTTTCTCCCATTTCTGTTAAACGGAAAGAAGATTTTTTTCAGTACATTTCTAAATGTAATCAGAGTTACTATAATTTAATTATCTTCCTTACAATAACATTTGTTTTTAATATTTTTTTTAAGGTTTAAAAAATCTTGGTCTTAAAATGGTCTTAAAAAGGTCTCAAAAAGGCTAAAATTGAACTTAACGGGTCATGTTGAAACCCTGATAATACAGTGCTCGCTCTTTTAAATTCATATTTTTA
Associated Phenotype:
Not determined