Busch Lab

ZMP

smarce1

Ensembl ID:
ENSDARG00000016871
ZFIN ID:
ZDB-GENE-030131-967
Description:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [
Human Orthologue:
SMARCE1
Human Description:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [S
Mouse Orthologue:
Smarce1
Mouse Description:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 Ge

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa12565 Nonsense Available for shipment Available now
sa12524 Nonsense Available for shipment Available now
sa20071 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa12565
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011319 Nonsense 161 424 6 10
ENSDART00000121981 Nonsense 157 420 7 11
ENSDART00000011319 Nonsense 161 424 6 10
ENSDART00000121981 Nonsense 157 420 7 11
Genomic Location (Zv9):
Chromosome 3 (position 35076210)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 34861406
GRCz11 3 34990914
KASP Assay ID:
2259-3756.1 (used for ordering genotyping assays)
KASP Sequence:
ACGTTAATGCAAAGAACCGCGCAGAAGCAGCTCYAGAGGAAGAAAGCCGG[C/T]AGAGACAGTCACGTTTAGACAAAGGGGAGCCCTACATGAGCATCCAACCC
Long Flanking Sequence:
TTTTATTTAAAAATAGCATTTTTAACTATTTACCTTCATTTTTAATTACTTGCCTTACAGTCACATTTGTTTAAAAGTTTCCATTTATTTATTGCTAAGAATACTGACCTGACCTATATATTTTATTATTAAATTATTGTTATTGTAATAATATATTAAATTAAAATAATTTTTGATAGGGCAGGTGGGATATTCAACTGGGATATTAAAAAAAAAAAATCCTTAGCCTTTAACCTTGTATGAGTCTAAAATTTCCTTCATAATGGTCCTAAAAAAGTCTAAAGTCGTAAATGTAACTTGGTGAAAACTTGGTAACTTGGTGAAACCTGCAGAAACCCTGAATTCAATTTGAAGGCTATTCCTTAAGGCACTAAGCACAACTTCTATCCCCGCAGATTGAGTATAATGACTCTCTGAAGGCCTACCACAACTCTCCAGCCTACCTTGCGTACGTTAATGCAAAGAACCGCGCAGAAGCAGCTCTAGAGGAAGAAAGCCGG[C/T]AGAGACAGTCACGTTTAGACAAAGGGGAGCCCTACATGAGCATCCAACCCGCTGAGGACCCCGATGGTGAGATGCATGTCACGATTTCAAGTTTGAATAACAAGAACATAACACAGTGTTAATATGAATCATACATTATTTATAAATGATGTCAAGTTTTGTAAGCTTGTAAATGTTATCTGTTTTTCTCATTGAATATCTATTGAAGCTGATATGGAAATAAATTAAATGAAAAGGTCAATAAATAAGATATTGATGCATACAGTGTAAAGAAAATCTCACAGGCTAAATATTTTCATATACTTGATCTCAACTCACATCAGTCAAACCCTCAAAAATATTGAATTAAACATGAGTAACTTATTGAAATAAAGTACCATTAAAAAACATTGTCGTGACTTTTTGCCATATTTTTTACAGTATATAAAGTAATGCCTACTGTATTTTAATAGATGGTTATAACATGCTTGGGTAAGGTTAGATGTGAACAACTCAATTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12524
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011319 Nonsense 161 424 6 10
ENSDART00000121981 Nonsense 157 420 7 11
ENSDART00000011319 Nonsense 161 424 6 10
ENSDART00000121981 Nonsense 157 420 7 11
Genomic Location (Zv9):
Chromosome 3 (position 35076210)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 34861406
GRCz11 3 34990914
KASP Assay ID:
2259-3756.1 (used for ordering genotyping assays)
KASP Sequence:
ACGTTAATGCAAAGAACCGCGCAGAAGCAGCTCYAGAGGAAGAAAGCCGG[C/T]AGAGACAGTCACGTTTAGACAAAGGGGAGCCCTACATGAGCATCCAACCC
Long Flanking Sequence:
TTTTATTTAAAAATAGCATTTTTAACTATTTACCTTCATTTTTAATTACTTGCCTTACAGTCACATTTGTTTAAAAGTTTCCATTTATTTATTGCTAAGAATACTGACCTGACCTATATATTTTATTATTAAATTATTGTTATTGTAATAATATATTAAATTAAAATAATTTTTGATAGGGCAGGTGGGATATTCAACTGGGATATTAAAAAAAAAAAATCCTTAGCCTTTAACCTTGTATGAGTCTAAAATTTCCTTCATAATGGTCCTAAAAAAGTCTAAAGTCGTAAATGTAACTTGGTGAAAACTTGGTAACTTGGTGAAACCTGCAGAAACCCTGAATTCAATTTGAAGGCTATTCCTTAAGGCACTAAGCACAACTTCTATCCCCGCAGATTGAGTATAATGACTCTCTGAAGGCCTACCACAACTCTCCAGCCTACCTTGCGTACGTTAATGCAAAGAACCGCGCAGAAGCAGCTCTAGAGGAAGAAAGCCGG[C/T]AGAGACAGTCACGTTTAGACAAAGGGGAGCCCTACATGAGCATCCAACCCGCTGAGGACCCCGATGGTGAGATGCATGTCACGATTTCAAGTTTGAATAACAAGAACATAACACAGTGTTAATATGAATCATACATTATTTATAAATGATGTCAAGTTTTGTAAGCTTGTAAATGTTATCTGTTTTTCTCATTGAATATCTATTGAAGCTGATATGGAAATAAATTAAATGAAAAGGTCAATAAATAAGATATTGATGCATACAGTGTAAAGAAAATCTCACAGGCTAAATATTTTCATATACTTGATCTCAACTCACATCAGTCAAACCCTCAAAAATATTGAATTAAACATGAGTAACTTATTGAAATAAAGTACCATTAAAAAACATTGTCGTGACTTTTTGCCATATTTTTTACAGTATATAAAGTAATGCCTACTGTATTTTAATAGATGGTTATAACATGCTTGGGTAAGGTTAGATGTGAACAACTCAATTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20071
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011319 Nonsense 424 424 10 10
ENSDART00000121981 Nonsense 420 420 11 11
Genomic Location (Zv9):
Chromosome 3 (position 35079579)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 34864775
GRCz11 3 34994283
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCAGACCGCATCAGACAACACCCCTGAGGAGCGCCTGCCCACCCAGCCA[C/T]AATAACACATCCACACACTCTCACCTCGCTCTGCGTAGAGTCATGTGTCC
Long Flanking Sequence:
TAGAATTTTGAGGAAATAAATAATTCCATTTTGCAATAAGTCTGTAACAAAGAAATGTGGCATTTCTGCCATTAATACTTTCCAGATGCAGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATGTGTGTATATATATATATATATATATATATATGTGTGTGTATATATATATATATATATATATATATATATATATATATATATACATACACAAATGAATTTTAAAAATGGCAGAATTGCAAAGGTTTGACAGGCCCTTTTGCCTGTTGTGCAGAGTCTCTTGCTGAAACTTCTGAAGGATCTCAGGAGGCTGAGCAAGGCACACCTGCAGCAGGAGAGAAAGCAGCCCAGCCTGAGCCTGCAGAGGGCGCAACAGACGAGGGCACCAGCGACAGCACGGCTCCATCTGAGAGCAGCTCCGGACCCCCAGCAGAACACCAGACCGCATCAGACAACACCCCTGAGGAGCGCCTGCCCACCCAGCCA[C/T]AATAACACATCCACACACTCTCACCTCGCTCTGCGTAGAGTCATGTGTCCTCTAGGATTTACCGGTTAATCCTGTGACCTGGCAGTGCATGAGAGTGAGAACAGTGAAAATTACTTTTCTCCCCCTCATAATCATCTACAGTGACAATGACAGCAAATTCTTAATTGCCGTTTCACAGAGATTCACCTGTTCACTTGAACTGAAGCCTGATGTTACAAGCCCCCTTCAGTCATCTTAAGCTTTATGGCCATTTAAACGTCATTTTATCTTTTTAAAGCAGAAATAAATTAAGCAGATGTTGTGTAAAATGTAACTTTTTCATCTTGTAGACACCAAATGGGTTGCGAAAGCAGAACGGCAAGGTTATTTGCTGTTGCCTTACCATTTATCTACCTGTGGCATGGCCATTTTATGCTGTATCTTTGTTTCTGATATTTTTTTCACTATTTAGTTGAGTAGTTTGTGGATTTAGTGCTTCTCTTTCTCTCACTTTATTCAAG
Associated Phenotype:
Not determined