ZMP
zgc:56230
Ensembl ID:
ZFIN ID:
Description:
Zgc:56230 [Source:UniProtKB/TrEMBL;Acc:Q7ZV42]
Human Orthologue:
CLEC16A
Human Description:
C-type lectin domain family 16, member A [Source:HGNC Symbol;Acc:29013]
Mouse Orthologue:
Clec16a
Mouse Description:
C-type lectin domain family 16, member A Gene [Source:MGI Symbol;Acc:MGI:1921624]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10428 | Essential Splice Site | Available for shipment | Available now |
| sa11670 | Essential Splice Site, Missense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa10428
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000103690 | Essential Splice Site | 162 | 415 | 4 | 17 |
| ENSDART00000123609 | Essential Splice Site | 162 | 1044 | 4 | 23 |
| ENSDART00000123977 | Essential Splice Site | 162 | 414 | 4 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 26114171)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 26772801 |
| GRCz11 | 3 | 26903672 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTGTCTTTGAAGCTGAACAACCACACCGTTCACTTTTTTTACAATGAGG[T/C]AAGATGCATTTGCTGGGGCAGCTCTCATTTTTTAAATGACAGATCATGTA
Long Flanking Sequence:
GGGTGATCAGAATGACAGCTCAGTGTTTGAGTGAGTTTTGCCTTTCTGTTGTTATTTTTTTTAAATTCCAAAAAACTAAATCATGTTATAAGTGACTGAATGCATCATGCTTTCTTCATAGCTTCTTTTTGGAGAAGAATATGTTTGCATTTTTCCTCAATATATTACGACAGAAATCTGGACGCTATGTTTGTGTCCAGCTTCTGCAAACGCTCAACATTCTTTTCGAGAACATCAGTCATGAGACCTCTCTGTGTAAGTAATTGCAGAAAGGGGGAGGGGACGATTAATGCATTATGATTTTATGTTAATGTTCTGAATGTTCAATATTGCATTATTTTCCTTTTCAGATTACTTGCTGTCTAATAATCATGTTAATTCCATTATTGTGCATAAATTTGACTTCTCCGATGAAGAAATTATGGCGTACTATATCTCATTTTTGAAGACTTTGTCTTTGAAGCTGAACAACCACACCGTTCACTTTTTTTACAATGAGG[T/C]AAGATGCATTTGCTGGGGCAGCTCTCATTTTTTAAATGACAGATCATGTACTGAAAGCAGAAGGGGGCTTTTATTTGTGGGTTCGATTGTGATCGAGCAGAGCTCTTCCAGGAAGAGCTAACAGCTCACTGTGACTCTGTAAAACCATGTTTCCTGTGTCTTCATGCAACTTGAGCAATTATTTTGTTTCATTTCGGACAGAAAAGGGCCAGTTGTAAGTTAACTAGTTTTTTTTATGCTGATTGGAAGGTGACATATGTTTCAGGGCTCCTTTGTATAGGGGGAAGTTATTGGTGTACTGTAAATGGTTGTGTTTAACAGTCGTGTGCTCTTTATTCTGTGGCACCTTTGATACTGGGGATCATTGGTGTCAGGAATAGAGAAGGCCTAAACGGAAGGATTCACTCTATGAGAGATTTGAAGCTGCATTGTTTTTATATACATTATTAGTGTAAAATTACAGTTAGAATTATGTAAATCAGTGTAAGTTATTGATGTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11670
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site, Missense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000103690 | Essential Splice Site | None | 415 | 14 | 17 |
| ENSDART00000123609 | Missense | 720 | 1044 | 19 | 23 |
| ENSDART00000123977 | Essential Splice Site | None | 414 | 15 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 26173060)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 26713912 |
| GRCz11 | 3 | 26844783 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGCATGGTGGTGAGCAAAGATGGGGTTCAAGCTCAGCGCTTTCTGGCTG[T/A]AGACGTGTACCAGATGAGTCTCGTGGAACCGGATTCAAAGCGTCTTGGCT
Long Flanking Sequence:
CCTTTGCAAAAAAAAGCTTAGTTTTTGTACTCTAAATAAATTACAGCAGTTTAATTTAGTGAATGTTTTCATCCCGAACAAAATGAAAGGGTATTAAGTCAACAGTCACAAGGGTTAATAAACAGCTAATGAGTTGGTTAGTAGTGTATTAAGCTAGTAGTCTTAGATAATGGTTTGTTTATACCATGAATTGTGACCTTAATGAAAGTGTAACCCATGTCTGTGTGAGAGGCAGATTTTTTTCAGATTCCTGAAATGATTGATTTTGGTTTGTTTTGAACGCTTGAATTGGTTGCAATGTATGAATACTATTCGCTACTTGAGCTCTGACCTTTATGTCTTGTGTTTCCCTGATGTGAATTTGTTGAAAGTCCCTGGAAATTAACGATCTATTATTCAATTGTTGTTGTTTTTTTTTTTGTCTGTTTTAGACAACAGTGATCTTATCGCTTGCATGGTGGTGAGCAAAGATGGGGTTCAAGCTCAGCGCTTTCTGGCTG[T/A]AGACGTGTACCAGATGAGTCTCGTGGAACCGGATTCAAAGCGTCTTGGCTGGGGTGTTGTCAAGTTTGCCGGCCTTCTGCAGGTCTACTCCCACTCTTACACTGCAAAGATAACACCCAGACAAAGGAAGCACACTCTGGCCACATTCTTTTCTTGGCTGAGCAACACATGAAGTGGTCCAACAGCTTTTCTTGAAAAGCATTTCCACTTTTTAGCCGTTTAGGGTTGCATGAACGCATTCATAATTTTAAACAAATCAGCACTACAAGAACGCTAACGGTCACACTTGTGGAGACCTAACGTGTAAAGCTGCAAATTCCAATTTTTGATACATTTTCACTTTAATTACAAACAAACATAGGTGTTTTTAATTGATTAGTTCAATGGTGCATATTCACCCTTTATTAATTGATTAGTTTAATAGTGCATATTCGCCCCTTATTTTAGATTTGTGGTGTGTTAACTATGTTAACTATGCTTTTTTTGTGTCAGGTCATTTC
Associated Phenotype:
Not determined