ZMP

tnpo2

Ensembl ID:

ENSDARG00000038239

ZFIN ID:

ZDB-GENE-040822-16

Description:

transportin-2 [Source:RefSeq peptide;Acc:NP_001004003]

Human Orthologue:

TNPO2

Human Description:

transportin 2 [Source:HGNC Symbol;Acc:19998]

Mouse Orthologue:

Tnpo2

Mouse Description:

transportin 2 (importin 3, karyopherin beta 2b) Gene [Source:MGI Symbol;Acc:MGI:2384849]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6883	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa33134	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa6883

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000055757	Essential Splice Site	216	889	7	25

Genomic Location (Zv9):

Chromosome 3 (position 18639537)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	3	18667899
GRCz11	3	18817639

KASP Assay ID:

554-5258.1 (used for ordering genotyping assays)

KASP Sequence:

CATTAGTAGAGCACAAGCCCTCATGGACAACATYGACACTTTTATTGAGG[T/C]ACTGATCCATGTGCAATGGATTTAATAATATCCATTCTTAAAGTTTTACT

Long Flanking Sequence:

ACATGTTTTTTTCCTTTAACTATATAAGCAGAATTGTGCTGTATGACCGTTGCAAAACAGCTATTTAGGAAATACTGTCCATTTGACATTTCTATATATTGTCACCTCTGCCACACTTCAGATGTGCTGTTGCATCTCACACCCTAAAATACAGAAATATAGTGAGATTTAAATTTTTTTTTTCTTTGTTAATATCCAGGGCTCATTTGGAGCTCTTCAGAAGATTTGCGAGGACTCTTCTGAGCTACTGGACAGTGATGCTCTGAACCGACCTCTAAACATCATGATCCCCAAGTTCCTGCAGTTCTTCAAACACTGCAGCCCCAAGATCAGGTTTGTTTAGAGGATTCTTCATCTCTCTTGGAACAAAACGCTTTATACAATGAGGATCTAATGGTTGTTCTTGTGGTTTTGTAGGTCTCATGCTGTTGCCTGTGTGAACCAGTTCATCATTAGTAGAGCACAAGCCCTCATGGACAACATTGACACTTTTATTGAGG[T/C]ACTGATCCATGTGCAATGGATTTAATAATATCCATTCTTAAAGTTTTACTAAAGCAACCCCCGCTTAATGTAATGAAGTGCAAATGTCACAATAATTGTTAATTGATTTTATCAGAAAAATCTTTGTTATTAAGTCATTATTGTATTTTATATACCTATAAAAATTTTATATTGTCAACTTATCATTAATTGATCAAATAAAGTATTTTGGATGTTACCATGCTATTACTGCTTTATTTATAAATTAAACAACTGTAAAATTCTTTGAAATTTCAAATTATAGATGAGCAAAAGTGAGCAATGTTTTTTTTCTACTGAGGAGAATCTTTATTTGTGCATCATTCTGTGAAATTCATAAATTATACAATCTGATAATTACCATCTACTTAAACAAATGGAATTTATTTTAGTTACTTTTAGATGAAATGTATAGTTTTTTTTTATTGCTCAAGAGAAGCAACTGCCCATGTAACATCTAAATAAGCATGTTAACAAACATT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa33134

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000055757	Essential Splice Site	854	889	23	25

Genomic Location (Zv9):

Chromosome 3 (position 18655466)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	3	18683828
GRCz11	3	18833568

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGCCTCCTGGGTTACTCCAAAAGACGATTTGAGGGACATGTTTTACAAGG[T/G]ACAAATATTTTTCTTCAGTAACTAAGCTTTTGATGAGTTTATAGTTTTGC

Long Flanking Sequence:

GGGGTAAATCCTGGAGGAGTCGTACAGGTGAGAGCTAATAAATGGCAAACACCATAAGTTGCATTGGACAGTTGTCAACCATAACCAAAAATGCCACACTGAACTTTAATTCTACACAAATATTTTGAAATTAAGGTAAATCTAGTATTTTAATGTTATATTTACATAGTATCCTATTAAAAAAATAAAAGCGAAAATAAACATGAATGTATAATTTGTATTTTCTTTCTGTGTTCTCTAATGTACCCATTTTAATTATAATAAAGTATAAATACAGATTTTTTAGCCCACTTGTCTACTAATAAAATAGATAAATGGAGAAATTTATGTGTATGTTTTACTTGGGTTATTATTATTTAAAAAGTGTTAATAGTTAGTGTTAGTAGTTTCAGTTGGGCTTTAATGTGATTGTTTTTGCACTCAGGACTTCATCTTTTTCTGTGATGCTGTGGCCTCCTGGGTTACTCCAAAAGACGATTTGAGGGACATGTTTTACAAGG[T/G]ACAAATATTTTTCTTCAGTAACTAAGCTTTTGATGAGTTTATAGTTTTGCCAGCATAGAAGCACAAGTACTTGCCATTTCAAAGGCATTTGTCAACTTTTTCTCTAGATTCTGCATGGCTTTAAGGATCAGGTCGGTGAGGAAAACTGGCAGCAGTTCTCAGAACAGTTTCCACCGCAGCTGAAGGAGAGACTTTCAGCCTGCTATGGTGTGTAGATTCACTCTTGCGACATGGAAAACCAACTATTAAGGTGAGTAACCTCAGCAATCAAGTAAAAACAGCTTATCTAATGGGGTGTGCAATGTTTATTAATGATATTGTAATAGTCTTATTTTTATTTTTATTTATTTTTTTACTTATGTTATCAAGTTTGCCTCTCACTGTAAACAACAACTAAATGTACTAAGAGTCTAAAACTTTGACTGGGTCAAAGAAGCTTATTAAAATCATGTTATAATAGGTATAATAATGCTAAATAAATAAAATTGATACAACTAGAA

Associated Phenotype:

Not determined