ZMP

si:ch211-106n13.3

Ensembl ID:

ENSDARG00000052633

ZFIN ID:

ZDB-GENE-030131-9088

Description:

hypothetical protein LOC563353 [Source:RefSeq peptide;Acc:NP_001038479]

Human Orthologue:

COL21A1

Human Description:

collagen, type XXI, alpha 1 [Source:HGNC Symbol;Acc:17025]

Alleles

There are 5 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa15157	Nonsense	Available for shipment	Available now
sa14259	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa15157

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000083654	Nonsense	567	873	14	24
ENSDART00000140294	None	None	195	None	5

Genomic Location (Zv9):

Chromosome 2 (position 50589056)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	50284588
GRCz11	2	50018818

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TKGGATTCAAAACTGTACTTAAAGTGTGTSTTTGTGGTTTTAGGGTAWAC[G/T]AGGGCTTCCTGGAGAGATGGGGCCTGCWGGAGCTCAAGTAAGAACCYARA

Long Flanking Sequence:

ACTGAAAGTTAACTCTACTCATTTGAAAAGAGTTTTGAACTCAGTGTTAAAGGTAATGAGTTAATTAAATACCTCATTACTTCAACTTAAATGGAGTGAGTTCACTGTACTCATATAGATAAGGTTTTTTTTTTAACTCAAATGGTTTGTTGCAATCGGTTTCCTGAAACAGTTTGGTCCACTGGGTTTTACAGTACTCAGTTGGTTTGAGTTCTCTTCATTCATTGGATTTTACTGTACTCAACTTGTTTTTGCAAATGGGTAAGTTCACAGTACTCATTAGGATTAATTTTTGAACTTAAATGGTTTGAGTTACCTTAACTTTATGGGTTTTAAAGTGTACAAATTTTAACAAGTTTGCCACTAGATCAAAAAGTTAAAAACTGACAAGACATTGTTGATATTTGATGGTAATTTGACGTTTTATTTTGTGCAATCGGGAAAGTATTATGGGATTCAAAACTGTACTTAAAGTGTGTGTTTGTGGTTTTAGGGTATAC[G/T]AGGGCTTCCTGGAGAGATGGGGCCTGCTGGAGCTCAAGTAAGAACCCAAAATATAACTGAAAATATTAAGTATACATACAATTGCTGTTAATATTGCTTAATAATTATGTACAGGATGTCTTTAATTGCAATACCATTAAAAAAACTAGCAGAAAATGATCAGTTTTCAACTTTCTACATGATAATATTTGTAATTGAATTTGGGATGAATTGCTCTTATACATTTAGAATGAAACAAACATTAGCATTTTACTCAAATCCATATCTAATAATCCAGGGGTGTCAAACTCTGGAGGGCCGCAGCTCTGCACAGTTTAGTTTCTGCCCTGCTTCAACACAATTATCTGTAGGCATCTGTTACAAAGCCCTGATGTTAGTCGAGGGTTGTGGGGTTTGACATTTATTTAATTAAAATATATTTATATAAACAGTGAATGAGTGGAAAGACAACCAACGTAATGCCAAAAAATGTGTGCTTTTATTTACAATCCCAAAGTGAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa14259

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000083654	Essential Splice Site	785	873	22	24
ENSDART00000140294	Essential Splice Site	107	195	3	5

Genomic Location (Zv9):

Chromosome 2 (position 50560236)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	50255768
GRCz11	2	49989998

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CCAGGATATCCAGGACCTCCGGGCAGCAGAGGGCCTGAGGGAGTCAAAGG[T/G]GATTATACTGYGATTATAAATTSACAGGAAGATTAGAGACAAGTACTAAA

Long Flanking Sequence:

GGGATAAGTCACCCAAAAATGTAAATGACCTCATCATCTGATATGTTTTTTTTCTTCTGTTGAACACAAAAGAAGATACTGTAAGTACTGTATGCTTGTATCTGGCGCCCATTGACTTCCATAGTAGGAAACATATTACATAGCAAGTCAATATGTACCAACATCAACCAGCATTCTTCAAAATATCTTATTTTGAGTCCAATGGAAGAAAGAAACTCAAATAGGTAATAGGGGAAGGGTGAGTAAATGATGACAGATTTGACTTTTGGGTGAACTGTCTCTTTAAGAAGCGATATTCCCTTAACAGCCCAGCTGCCACAGCTCCTGCAGGCAATGGAGCAAAGAAGCTGCCAGCACTGTGAGACCAAACGAGGGCCAGCAGGCGATCCAGGTCCCCCAGGCCCAACGGGCCCATCTGGACCACCAGGGTATCCTGGCAGGGCAGGGTCTCCAGGATATCCAGGACCTCCGGGCAGCAGAGGGCCTGAGGGAGTCAAAGG[T/G]GATTATACTGTGATTATAAATTCACAGGAAGATTAGAGACAAGTACTAAAACGATTTGATGTTTTTCTTATAGGTGATATTGGTCCGATGGGTATAAAAGGTGCTAAAGGACAGGGTGAAATTGGGTTGCCAGGTCCACCTGGCCAACAAGGTAAAAAAATAAATAGAAAATACTAATGCATGACAGTAGTTATTTATTATTATTATTATGGTCACTTTATTTTAAGGTACAGTTCTCGCTTCATAACAAACCATTAACTAATGCTGCGTCCCAATTCGCATACACATACTAAGCCCTAAAAGTATGTACTTTTTTGTGAAGGAAAAATATTTACTTTTGAATGTGTAACAAGAATATGCTAGCTTTGGGACATACTACTTCCTCGTTAACAGATCGCTACGTTGCTTAGTTATGAGCCCTGTCAATCATCCACATTTCTGTCATATTTCATTTCCTACCTTATTGGAGAAGCAGCAGCAGGTTAATCTGCCATTCACAA

Associated Phenotype:

Not determined