Busch Lab

ZMP

si:ch211-168n16.1

Ensembl ID:
ENSDARG00000036626
ZFIN ID:
ZDB-GENE-040724-23
Description:
Semaphorin 6ba [Source:UniProtKB/TrEMBL;Acc:B6E514]
Human Orthologue:
SEMA6B
Human Description:
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B [Source:HGNC Symbol;
Mouse Orthologue:
Sema6b
Mouse Description:
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B Gene [Source:MGI Sym

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa33030 Nonsense Mutation detected in F1 DNA Not yet available
sa38358 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa39939 Nonsense Mutation detected in F1 DNA Not yet available
sa17007 Nonsense Available for shipment Available now
sa6865 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa33030
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000053204 Nonsense 29 872 1 16
Genomic Location (Zv9):
Chromosome 2 (position 49802662)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 49498432
GRCz11 2 49232662
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCTGTGCTCCAATTGGCTGCCTGCTCGTTTCCAGAGGAACCTGAGCCTT[T/A]AATCTCCGCCCCCGCTGAGGGTAAGGACACGCCCCCTCCCCTTTTCACTG
Long Flanking Sequence:
ATTAATATTTATTTTAGTTTTTGATTAGTTGTGTTGTTTTATGTCGAGTTATAACGCATTTCCATGTGGTACTGCATTTTTTGTGCTCATTCTGGCAATAACTCATTAGCTTAGGAACACAATAACAGTAGGCAAAGCTGCAATTACAGTATGCGAGTGTTAATTATGCGAGTGTTAATTATTTCTCTCATACCTTCATGTTTGGTTGTCTATTCCTTAACAGAGCTGCTTTTAATACAGTGCCTGCTCTGTACATACACTTTCAAGTCAGTCACAAATGATGGTTATTTCAGGCTAGGTGTGGAGTGAGCATCAGAAAAGCAGTCACTAGCATTGCATTGTGTTATTTTCAGGATTTTTTTTTAATAACTTCTCATGTCTTCTTGTGTCTCTGCAGCTCTGGTGTGTCGCTGCCATGGCGACTCTGACCCCCTGCCTCTTACAGATCTTTGCTGTGCTCCAATTGGCTGCCTGCTCGTTTCCAGAGGAACCTGAGCCTT[T/A]AATCTCCGCCCCCGCTGAGGGTAAGGACACGCCCCCTCCCCTTTTCACTGACTGTATATACAGCATCAGCAGAGACATTATTAGGCAGATATACATTACATCATGGGTATCTAACGCATGTACTGTATATTTTGAGCAACACAGGTACCTTGATGTAAATGGTATGAATCATAATTGTAATTGTTTTGGAATTTATTGCTTTCTTTTTAATGTGATTTTAACAAAAACAGCAACATAAATTATATGATGCATTGCTGTTTTGAAACTGGATAACACTTTACAATAAGGTTGTATTAGTTATTGTTAATGTATTTACCAACATGAACAAACAATGATCAATACATTTATCACAGTTTTTAGTCATGTAAGTTAGCTTGTTAACTCACGGGCATTAACTAATGTTAACAAGCATAAATTTGGATGTTAATAATGCAGTAGTGAATGTTAAACTAATCAATGCTGTACAAGTATTGTTCATAATTAGTTCATATTAGTAAATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38358
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000053204 Essential Splice Site 249 872 9 16
Genomic Location (Zv9):
Chromosome 2 (position 49858393)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 49554163
GRCz11 2 49288393
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAAAAACAAACCTATCCCTAATGTTAATCTGGCCCTTTGTGTGTGTTTC[A/G]GGTGATGGTGTCTCGTGTGGCGCGTGTGTGTAAAGGAGATCTGGGCGGCT
Long Flanking Sequence:
TATAGGATCTATTATGTTAATTATTAACATCATCGCTCAACAATTCTACTTCTTCTTCTTCTTCTGAAACTGAAAATTCCTCATCAAAATCACTGGAATAAACCATTAAATTAAATGATAATCTACTTTTAAATAGTTCTTTTATAGTGCAATAAAATTTTTAAATTTTACAGTTTGTACTTTATTTTTGATTTAATAAATTGATAAGCACCTTATTTTAAAACATTTAAAAAAAACTACTAACTACTACTACTACTACTATAAATACTACTAACTTCTACTAACTTTTGACCGGTAGTGTATGTCCATCATCTAAAAAAAAAATGGTGTTTGTGGTGTTTTGTGACCCTTTTAAGATCAGATGGGGGATCAAGTGATAATTTGGGGGAATCGATCCCCTCAAACCCCCCTGTAATTCGCACTCTGGGTAGAAAAATAAGGGACTGTCTTGGAAAAACAAACCTATCCCTAATGTTAATCTGGCCCTTTGTGTGTGTTTC[A/G]GGTGATGGTGTCTCGTGTGGCGCGTGTGTGTAAAGGAGATCTGGGCGGCTCTCAGCGAGTGTTAGAGCGGCAGTGGACATCGTTTCTGAAGGCCCGTCTGAACTGCTCCATCCCTGGAGACTCACACTTCTACTTCAACCTGCTGCAGTCCACCAGCCCCATCATACGCATGCAGGGCAGAGACGTCATCCTGGGGGTCTTCTCTACACCCTCCAACAGGTACACACTCACACTTGCATACACACACTCATGGAGGCATGCACACATGCAAGCACATACTCAAACACATGCACACTTGCACACACACTAATGCACACACACACACACACACATACACATACACATGCACATACACAAGCAAACACACTCTCGCAAACACACTCACTCATGCAACCGCAGGCACACACACACACACACAAAGTCACACATAATGTACACGCACTCACGCTAACACACAAGCACGCTTACAAAAATTACTCTCACACACTCTTAGATGCGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39939
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000053204 Nonsense 297 872 9 16
Genomic Location (Zv9):
Chromosome 2 (position 49858539)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 49554309
GRCz11 2 49288539
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCTGAACTGCTCCATCCCTGGAGACTCACACTTCTACTTCAACCTGCTG[C/T]AGTCCACCAGCCCCATCATACGCATGCAGGGCAGAGACGTCATCCTGGGG
Long Flanking Sequence:
GTGCAATAAAATTTTTAAATTTTACAGTTTGTACTTTATTTTTGATTTAATAAATTGATAAGCACCTTATTTTAAAACATTTAAAAAAAACTACTAACTACTACTACTACTACTATAAATACTACTAACTTCTACTAACTTTTGACCGGTAGTGTATGTCCATCATCTAAAAAAAAAATGGTGTTTGTGGTGTTTTGTGACCCTTTTAAGATCAGATGGGGGATCAAGTGATAATTTGGGGGAATCGATCCCCTCAAACCCCCCTGTAATTCGCACTCTGGGTAGAAAAATAAGGGACTGTCTTGGAAAAACAAACCTATCCCTAATGTTAATCTGGCCCTTTGTGTGTGTTTCAGGTGATGGTGTCTCGTGTGGCGCGTGTGTGTAAAGGAGATCTGGGCGGCTCTCAGCGAGTGTTAGAGCGGCAGTGGACATCGTTTCTGAAGGCCCGTCTGAACTGCTCCATCCCTGGAGACTCACACTTCTACTTCAACCTGCTG[C/T]AGTCCACCAGCCCCATCATACGCATGCAGGGCAGAGACGTCATCCTGGGGGTCTTCTCTACACCCTCCAACAGGTACACACTCACACTTGCATACACACACTCATGGAGGCATGCACACATGCAAGCACATACTCAAACACATGCACACTTGCACACACACTAATGCACACACACACACACACACATACACATACACATGCACATACACAAGCAAACACACTCTCGCAAACACACTCACTCATGCAACCGCAGGCACACACACACACACACAAAGTCACACATAATGTACACGCACTCACGCTAACACACAAGCACGCTTACAAAAATTACTCTCACACACTCTTAGATGCGTACGCACACACTCATACATGCACAAATTCACAAACACATGCACACACTAACGAATGAACACACGCATGCACACACAGTCTCAGACACACACACAAGCAAACTCACGCACACACACACACTTACACACGCACACATGTACATACACAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17007
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000053204 Nonsense 342 872 10 16
Genomic Location (Zv9):
Chromosome 2 (position 49875651)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 49571421
GRCz11 2 49305651
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGCGGTGTGTGCGTTYGACATGCAGCAGCTGGCACGTGTGTTTGAGGGC[A/T]GATTCAAAGAGCAGAAATCACCAGAATCCATATGGACACCAGTACCTGAT
Long Flanking Sequence:
CACTGACAATAAGAAACTTTTCAAGTACATGTCAACTTATACTAACCCTAACCCAACCCCAACTGAACAGTCTACTTTTTATTTTTTATACATTTATTTTTTTATATATACATTTTAAGAATTGCCAAGGACAGTTTTTTGATATGACTGTAGCTTCAGTTGTTTAAAACAGTCTTTTGTAAGTATGGTGGGCTTACTCTCATCAAGCTGAATTTGATCAATCTGATGGGAGTGTGTGAAGACGCTCTATAATGAGATGCTGTAGAGGCAGATTGGTCGATTAGTCTGTCAGCTTCAGAAAAACCAATGGGGCTGTTGCGGCATGTCACTTTGGCTTAGGGTAACAACATGTGTGAAAATGTGTGAGTGTGTGTGTGTTCAGGGTGTGGATTGGATCAGAGATGTTTCTTGACCCGCTCTGCTCTGTGTCTTTACCCAGCATCCCCGGCTCTGCGGTGTGTGCGTTTGACATGCAGCAGCTGGCACGTGTGTTTGAGGGC[A/T]GATTCAAAGAGCAGAAATCACCAGAATCCATATGGACACCAGTACCTGATGAACTGGTGCCAAGACCCAGGTAACTGTCTGTCCATCTACACATGTCCGTCTTCCATCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTTCTTCCTTCCTTTTTTCTTTCTTCCTTCCTTTTTCTTTCTTTCTTTCTTTCATGCTTCCTTCCTTACTTTTTGCTGACTTCCATCCATCCATCCATGCATCCATCCTTCCTTCCTTCCTTCCTTCATTTTTTCTTTCTTTCTTTCATCCATGCTTCCTTCCTTCCTTTTTTCTGACTTCTATCCATCCATTGTTCCTTCCTTCCTTTTTTCTTTCATCCATGCTTCCTTCCTTCCCTTTTTCTGCTTTTGATACATCCATCATCTAACCATCAATCCATCCATCCATTCATCATTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCATCCATGCTTCCTTCCTTTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6865
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000053204 Nonsense 640 872 16 16
Genomic Location (Zv9):
Chromosome 2 (position 49911803)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 49607573
GRCz11 2 49341803
KASP Assay ID:
554-5246.1 (used for ordering genotyping assays)
KASP Sequence:
CGTCGTCMAGTATTCAGCGGAAGAGYGAGAARGAACGTTGCATGATGGGA[C/T]AAAGCAGAAGCGGCTCTGTAATGAGCGTATCCCGACACAGTGGCACAGAC
Long Flanking Sequence:
AATATCGTTAATTATTACCAAAAACATAAAGTATAATTAAAAGTAAATTGAGCAAATTTGTTATTTGAGAAGTGTTTATTAAACTGGTAGCCCTCCACATTAATCGGTACCCAAGAAGTAGTTCTCAGTTTCATAAAGGTTGGTGACCCCTGTTGTAGACATTAAAAATCACAGAATGTCCTTCTTAAAGAGTAGGGATGTGTCCTCAGCATCCTGGCCAAACTTGCTCACAAGTGATAAGTTCCAAATTTGGAAATACTAATATGTAATACTCTCTTTTTGCAGGTCTGTTACGTGAGAGTTTCATGGATGAGCCCGAAAGCCTTGTCACCTTGAACCTGCTGGTTGTTGCTGCAGTCTCTGCATTCTCCACCGGGGCAGCACTCTCAGGTTTAGCAGTGTGCTGGATCATGGGTCAAAAACACCGTCATCGTTCTCACAGCAACACTCCGTCGTCCAGTATTCAGCGGAAGAGTGAGAAGGAACGTTGCATGATGGGA[C/T]AAAGCAGAAGCGGCTCTGTAATGAGCGTATCCCGACACAGTGGCACAGACCGGCCAAGATCACAGGGTGAGACGCTTTTCGTCATGCCTAATGGGTGGGTGAAAGCTGGTGATTTAGACCCAGGTCTACTTCCCACACCAGAGCAAACTCCTCTGCAGCAGAAGCGTGGGCTCCGCCTGTCTGATTCTGGATCCAGCTGGGATCAAAGTCAGACCTTCCTGAGCTCAGTGGGAACCCAATGTCCACCTCCACCATCCACCCTTTATCTCAGCTCTAAACTCCTACAAGGAACCGGCCGACGCCATGAGGAAGCCATCGAGACTGGTATTGACCGCCAAAGGTATGTCTCCCTCTCCAAGTACCGGGATCAGGGAATACGCCCAGGTACTCTTCTTCGCAAGTCAGCCGGTGAATATAACTACCCCATGACTCCACAAGACTCCCCTGACCGACGGAGAGTGGTTTCAGCCCCCAGCACCCAGATAGAGTACAGCGGAGAG
Associated Phenotype:
Not determined