ZMP

si:dkeyp-68h1.1

Ensembl ID:

ENSDARG00000078226

ZFIN ID:

ZDB-GENE-070912-673

Description:

cadherin-12 [Source:RefSeq peptide;Acc:NP_001153302]

Human Orthologue:

CDH12

Human Description:

cadherin 12, type 2 (N-cadherin 2) [Source:HGNC Symbol;Acc:1751]

Mouse Orthologue:

Cdh12

Mouse Description:

cadherin 12 Gene [Source:MGI Symbol;Acc:MGI:109503]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa7500	Missense	Mutation detected in F1 DNA	Not yet available
sa32932	Essential Splice Site	Available for shipment	Available now
sa19782	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa7500

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Missense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000087446	Missense	190	800	3	11
ENSDART00000138733	Missense	190	800	4	12

Genomic Location (Zv9):

Chromosome 2 (position 28752186)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	29053821
GRCz11	2	29037354

KASP Assay ID:

554-4203.1 (used for ordering genotyping assays)

KASP Sequence:

TTTRTGATCAGGCACATATGTGACACAAATAACCGCCACTGAYRCTGATG[A/T]CCCTACTTATGGAAACMGTGCACGGATTGTGTACAGCATCCTTCATGGGC

Long Flanking Sequence:

ATAATGTAGTGAAGTACTGGTCAAAATCTACCTTTATGTAGCGTTCTTTGTATACTGCTTTTAATACACACTCTTCTGAAGCAGCTTTACAAAGAATAATGTTTATTGTTCACTGAGAAAGCCACAGGCGACACGTCAAAGAAAATTTTCTGAGATTTTAAAGCGGATGAGGAAGAAACCCTTGGAGGAACCAAGACTCAGCAAGTGGGCCTTTCTCCTCTGGCTGATACATGATTAATCAAATTGAGCCCAGCATAAACCATGAATCTGTTTGACAATGAATGCCTATTTACATTTGCGGTAATTTCCTAAGTACAATTGTGTGTACAATGTTTTGTTATGAGAAGGGCCTCAGGATCATAAATAAGTTCGGTATTCATTATCTTTATTTGCATGAATGTCAGTTCTACTGTCCTTTGATTGCTTATTATGGTGTGTTTGTTTTTCATGTTTGTGATCAGGCACATATGTGACACAAATAACCGCCACTGACGCTGATG[A/T]CCCTACTTATGGAAACAGTGCACGGATTGTGTACAGCATCCTTCATGGGCAGCCCTACTTCTCTGTTGACCCCAAGACAGGTGAACAATAGTGGATTTTTTTTTGGGGGGGGGGGGGGGGGGGATTATTACATCCGCACATGATCTTTTGAATTCTACAGCACCTCTTTCTAATGCTTTGCTTTCGGCATTTCGTTCACCTCGTTTCATGCGTCATCATCTGATTAAAAAGTAGCTCCTCTGAGAGGGGAACTATTAGGATTGATTAGTCTTTAGAAGAATGTCAAAGGTTCGCCTTTTCATCATAGAGCTCACAAAAGCATTGCACATTGCAGCACAGATTAATGAAGGCCTGTTCAATTCTTCAAATTGCTCCAGGCCTTTTACGTCCATCAGAAGAGCCTCAAATTCTAAGAATCATCTTGCAATCTGTCGCTTTACTATAAAAACCGAACTGTTCAGAGAACCGAAGGCAACCGTTTGCATGACTTTCAATGAGTT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa32932

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000087446	Essential Splice Site	544	800	9	11
ENSDART00000138733	Essential Splice Site	544	800	10	12

Genomic Location (Zv9):

Chromosome 2 (position 28822188)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	29123823
GRCz11	2	29107356

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAATCTTCACAGACCAGGAACAGAAACTTTACCATCAGGGACTATGGAAG[T/C]AAGTTAGAGAGTTTTAGAGAAAATATAAATATACTAAATAACCTAATATT

Long Flanking Sequence:

AACATGAAAAGAAAATGAATGAATGAATGAATAAATAATCAATGATGAAAAGAGATAATTTTTTGCAGACTTAACATAAAGAGAATAGAAAAATGTATTTCTTCTCTGCTCTGCTAATGCTGTCATTCTCTCATAATACTTGACTTTGTCTTCACGCGTGTATGGAGTTGACAGCGCAGCAGTCATAAATGACGCCCCATGTGGTTGAGTCATAAAGACAGTAAAAAACCTCAAATGATCCCTTTGAGGTTCGATGAGAAGAGCGCGTCAGCTCTGTCAATCAAACAGACTATTGCTGTCGTTTGAACACTATAAGTGCATTTACAAAATCTGCATCTCTTTTCTGTGGTGTTTTATTCAGAGGACTGTTCTGTTTCTGTTCTCTAGGTGATTCAGATCCTCAGTGCCACAGACAAAGACGTGCCTGCTGTTGAGCACCGCTTCTACTTCAAATCTTCACAGACCAGGAACAGAAACTTTACCATCAGGGACTATGGAAG[T/C]AAGTTAGAGAGTTTTAGAGAAAATATAAATATACTAAATAACCTAATATTCTGATGTTTTCACATATCCCTATCAAAGTATGTTCACAGTCACACTTACACTCACCGGCCACTTTATTAGGTACACCTGTCCAACTGCTCGTTAATGCAAATTTCTATTCTACCAATCACATGACAGCAACTCAATGCATTTAGGCATCTAGATATGGTCAAGACGATCTGCTGCAGTTCAAACCGAGCATCAGAATGGGGAAGAAAGGTGATTTAAGTGACTTTGAACATGTCATGGTTGTTGTTGCCAGACGAGCTGGTCTGAGTATTTCAAAAATTGCTGATCTACTGGGATTTTTACACATAATCATCTCAAGAGTATACAGAGAATGGTCAGAAAAAGAGAAAATATCAGGTCAGAGAAAAATAGCTAGACTGGTTTGAGCTTATAAAAATGCAACAGTAACTCAAATAACCACTTGTTACAACCGAGGTATGCAGAAGAGCATC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa19782

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000087446	Nonsense	659	800	11	11
ENSDART00000138733	Nonsense	659	800	12	12

Genomic Location (Zv9):

Chromosome 2 (position 28831298)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	29132933
GRCz11	2	29116466

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GACACTCTGATGTCGTCTAAAGAGGACGTCAGGGACAATGTGATCCACTA[T/A]GATGATGAGGGGGGCGGGGAAGAGGACACCCAGGCCTTCGACATAGGTAC

Long Flanking Sequence:

AAACTTGAAATGTTAGGCATAATTCTTGCAGCAGTGTCTATTTCTCTCTCTCTATCATATCTTTCTTTGAGTAAAGCGAACGTTGTCTGCCTCTGAGGAGGGAGATGAAAGCTCAGAAAGAAAAAAAAAAAAACCTCCCTTCCTCTCACACAACCCAGCACTACGATAGTGACAGACAGCATGTCAAAACTGCATTATGGCTACCCTCGGGCTGCCATTCTCTTTAGTCCCATTTTGAAAAGCCACGTCAGAACAACAGCAACAAAGAAAAATCAGCTAATGGCTCCAGAACATGTGACCACCCTTTTTTCCCCTCACTAGTTTGTTGTCACTTAAAGATAGTACTGTATGTATGTCAGGTTGCATTACGCGACATAACAAATCAAGTGCCTGTGGTGTCTTTCAGTGATGGTGGTGCTCTATATGGGCCTGAGAAGACACAAGAAGAAGGACACTCTGATGTCGTCTAAAGAGGACGTCAGGGACAATGTGATCCACTA[T/A]GATGATGAGGGGGGCGGGGAAGAGGACACCCAGGCCTTCGACATAGGTACGTTACGCAATCCCAAAGGCATCAAAGAGACGGGGCCGCTGCAGAAAATAAGATCAGAGGACAAGGCCGATCAGGCTAGCGCGGCCGAGGACAGCGAGGACATCCGAGCTTACATCCATCATTGTCTTTTGGAGAGCTCCACACCTCCGTATGACTCCCTGGTCACATATGCATATGAAGGAGACGGTTCGGTGGCCGAATCACTTAGTTCTATTGAATCTTGGGTGCTCGAGCCCAAGGAGGATTACAGAAATCTGTGTGACTGGGGTCCTCGCTTCAAAACACTGGCTGGGATATTTAAAGAGCATGAGGGTAAGGAAAAGGAGAAAGTGGAAAATGAAGCACACGCTGAGGCACTACAGGACAGGCTGGACTGAGAGTATTTTAAGGAGCTCTGTGAAATACAAAGTTTATTTATTTCAGATGTGGCACTTGAAGGGATTGTTCACTT

Associated Phenotype:

Not determined