ZMP

pdca

Ensembl ID:

ENSDARG00000011886

ZFIN ID:

ZDB-GENE-031023-1

Description:

Pdc1 protein [Source:UniProtKB/TrEMBL;Acc:Q6P968]

Human Orthologue:

PDC

Human Description:

phosducin [Source:HGNC Symbol;Acc:8759]

Mouse Orthologue:

Pdc

Mouse Description:

phosducin Gene [Source:MGI Symbol;Acc:MGI:98090]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa32893	Nonsense	Mutation detected in F1 DNA	Not yet available
sa39809	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa32893

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000007654	Nonsense	61	245	2	3

Genomic Location (Zv9):

Chromosome 2 (position 20683333)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	21229271
GRCz11	2	20887333

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAAGTATCCCTTCCAACAAGAGAGAGCTCCTCAGACAGATGTCCAACCCT[A/T]AATCCAGTGATGACCCACGGGAAAAAGTGAACCGCAAGGTAATCACAGAA

Long Flanking Sequence:

CCTAAAGATTGACAATATGCTTCAGCTAAATAAACGTTGTCAATTTAGATTACAGATTGACATAAAGGAATGTCTGTATTTTTTATGATTCCACTTATCAGGTCTTCATAGAAGATTCATCATGTCAGAGTCACCTGAGATTGAGGAACTACCAGCAACCCAGACAGGTAAAAAAAAAAGCCCTTAGAGTTTCACAGCAATTTCAGAACTCGTCTTACAAACATCAGTATTTACTGTAATCATGAGGTAATAGTGGAGATTTCCCACATGTTGTGATATGGCCAAGATTACTTTAATTGAAGGTTATGGTCAGTATCTTGTAAACAGTTTATTATTATTATTATTATTATTTAATTAACCCATTGATTGCAATGTGGCAAAACCTCTTTGTAGGGCCAAAAGGTGTCATCCATGATTGGAGGAAGTTTAAACTTGAGAGTGAAGACCATGAAAGTATCCCTTCCAACAAGAGAGAGCTCCTCAGACAGATGTCCAACCCT[A/T]AATCCAGTGATGACCCACGGGAAAAAGTGAACCGCAAGGTAATCACAGAAACATATTGTCAACCTTATTTGTCCCAATACAGTTGGAAAGTTTGAGATTGGTAAAATTTTTTGAAAAATAAATACCACGTCTACATTCGCTTAAGATCCCATTTTCTACATTAAGAAATAAAAAATATATTACCTTGTGATTATAAAGTGGATTGGTACCAGCCAATGATAAAACACATCAGAAAATAATTACCAGGTTTCACTAGGAGGAAAAAACTTTCAGTTGAAAAATTAAGGGTCCCAAAATCGATTGCTGAGGAACACCCATAGATACTTACATTAGAAGTCATCTATGCTATTGTTGTCAATTGGAAGGAATGTGTCGATATAGCTGCCATTTTAGCTGCCACTACACTGAAATGAATATGGCCCAAGGTGCAGTGGAGAACTAGCCATCCGAAACCAGAGATATATACACATATATACATATATCTATGATCAGGAGTTTAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa39809

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000007654	Essential Splice Site	73	245	2	3

Genomic Location (Zv9):

Chromosome 2 (position 20683294)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	21229232
GRCz11	2	20887294

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGTCCAACCCTAAATCCAGTGATGACCCACGGGAAAAAGTGAACCGCAAG[G/A]TAATCACAGAAACATATTGTCAACCTTATTTGTCCCAATACAGTTGGAAA

Long Flanking Sequence:

TCAATTTAGATTACAGATTGACATAAAGGAATGTCTGTATTTTTTATGATTCCACTTATCAGGTCTTCATAGAAGATTCATCATGTCAGAGTCACCTGAGATTGAGGAACTACCAGCAACCCAGACAGGTAAAAAAAAAAGCCCTTAGAGTTTCACAGCAATTTCAGAACTCGTCTTACAAACATCAGTATTTACTGTAATCATGAGGTAATAGTGGAGATTTCCCACATGTTGTGATATGGCCAAGATTACTTTAATTGAAGGTTATGGTCAGTATCTTGTAAACAGTTTATTATTATTATTATTATTATTTAATTAACCCATTGATTGCAATGTGGCAAAACCTCTTTGTAGGGCCAAAAGGTGTCATCCATGATTGGAGGAAGTTTAAACTTGAGAGTGAAGACCATGAAAGTATCCCTTCCAACAAGAGAGAGCTCCTCAGACAGATGTCCAACCCTAAATCCAGTGATGACCCACGGGAAAAAGTGAACCGCAAG[G/A]TAATCACAGAAACATATTGTCAACCTTATTTGTCCCAATACAGTTGGAAAGTTTGAGATTGGTAAAATTTTTTGAAAAATAAATACCACGTCTACATTCGCTTAAGATCCCATTTTCTACATTAAGAAATAAAAAATATATTACCTTGTGATTATAAAGTGGATTGGTACCAGCCAATGATAAAACACATCAGAAAATAATTACCAGGTTTCACTAGGAGGAAAAAACTTTCAGTTGAAAAATTAAGGGTCCCAAAATCGATTGCTGAGGAACACCCATAGATACTTACATTAGAAGTCATCTATGCTATTGTTGTCAATTGGAAGGAATGTGTCGATATAGCTGCCATTTTAGCTGCCACTACACTGAAATGAATATGGCCCAAGGTGCAGTGGAGAACTAGCCATCCGAAACCAGAGATATATACACATATATACATATATCTATGATCAGGAGTTTACCCGGTAGTCAGTATGCAGTTTTTTTTTTAAATCCTGAAA

Associated Phenotype:

Not determined