ZMP
si:ch211-114l13.10
Ensembl ID:
ZFIN ID:
Description:
Novel protein containing a NACHT domain [Source:UniProtKB/TrEMBL;Acc:A5PMF9]
Human Orthologue:
NLRP6
Human Description:
NLR family, pyrin domain containing 6 [Source:HGNC Symbol;Acc:22944]
Mouse Orthologue:
Nlrp6
Mouse Description:
NLR family, pyrin domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2141990]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31246 | Nonsense | Available for shipment | Available now |
| sa32801 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa31246
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000144276 | Nonsense | 207 | 319 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 1 (position 58656060)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 57234008 |
| GRCz11 | 1 | 57969690 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGATGTCCATTCTTGCGCATCCATCGATGGTTTATTTACAAGCCTCATC[A/T]AAGGAAGGCTGCTTCGCTCATCTCTCATCTGGGTGACCTCACGACCCGCA
Long Flanking Sequence:
TGTTCATTACTGAAGGGGACATGACAGACGTCTGCAAAGAACACGAGGTTCAGAAGTTTGACCTAGCCTTGCAGATGCCAAGATCTGAGGACAAACCAATCGACTGTAATGAAATATTCAATTTGTTGAGGGGGAAGGACAAGGGAAACGTTGTTCTGACCAAAGGCATCGCCGGCATTGGAAAGACGTTCTCTGTGAACAAGTTCATCCTGGACTGGGCTGAAGGAAGAGCCAATCTGGATGTGGACTGTATGTTTCTGCTTCCATTTCGAGAGATTAACTTGATGATAAAAGATGGAGATGTTAGTCTTCACAAGTTTCTGTTGAAACTTTTCCCTGACATCACTGGCGTGGAAACGACACCGTTTTATGAAAAATGCAAACTGCTGTTCATCTTTGATGGGCTTGATGAGAGTCGCCTGGATTTGAACTTTAACCTTAGTTCAGTGGACGATGTCCATTCTTGCGCATCCATCGATGGTTTATTTACAAGCCTCATC[A/T]AAGGAAGGCTGCTTCGCTCATCTCTCATCTGGGTGACCTCACGACCCGCAGCGGCCAATCGGATCCCTTCCTACCATGTCGGGTTGTTCACTGAGGTGCGCGGATTCACTGACAAGCAGAAGGAGGAGTACTTCAGAAAAAAGGTCCCAGATGAAGATCAAGCTTCCAGGATAATCTCCCACATCCGGACGTCCCGCAGTCTCTACATCATGTGCCACATTCCCGTGTTCTGCTGGATCATCGCCACCGTTCTTCAGGATATTCTCCAGAAGAACAAAGGGGAGGACATTCCCTCCACCCTCACTGAGATGTACATCCACTTCCTGCTGATACAGATGAACATCAAGAACCAGAAGTATGATGAAAAACTGATACGGGATCGAACAGAGCTGTTGGGTTCAAACAGAGACATGATTTCTAAGTTGGCCAAACTGGCGTTCGAACAGCTGAAGAAAGAGAACGTCATGTTCTACCGGGAGGATCTGGCAGCATGCGGCATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32801
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000144276 | Nonsense | 318 | 319 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 1 (position 58656393)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 57234341 |
| GRCz11 | 1 | 57970023 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGACATTCCCTCCACCCTCACTGAGATGTACATCCACTTCCTGCTGATA[C/T]AGATGAACATCAAGAACCAGAAGTATGATGAAAAACTGATACGGGATCGA
Long Flanking Sequence:
TCCCTGACATCACTGGCGTGGAAACGACACCGTTTTATGAAAAATGCAAACTGCTGTTCATCTTTGATGGGCTTGATGAGAGTCGCCTGGATTTGAACTTTAACCTTAGTTCAGTGGACGATGTCCATTCTTGCGCATCCATCGATGGTTTATTTACAAGCCTCATCAAAGGAAGGCTGCTTCGCTCATCTCTCATCTGGGTGACCTCACGACCCGCAGCGGCCAATCGGATCCCTTCCTACCATGTCGGGTTGTTCACTGAGGTGCGCGGATTCACTGACAAGCAGAAGGAGGAGTACTTCAGAAAAAAGGTCCCAGATGAAGATCAAGCTTCCAGGATAATCTCCCACATCCGGACGTCCCGCAGTCTCTACATCATGTGCCACATTCCCGTGTTCTGCTGGATCATCGCCACCGTTCTTCAGGATATTCTCCAGAAGAACAAAGGGGAGGACATTCCCTCCACCCTCACTGAGATGTACATCCACTTCCTGCTGATA[C/T]AGATGAACATCAAGAACCAGAAGTATGATGAAAAACTGATACGGGATCGAACAGAGCTGTTGGGTTCAAACAGAGACATGATTTCTAAGTTGGCCAAACTGGCGTTCGAACAGCTGAAGAAAGAGAACGTCATGTTCTACCGGGAGGATCTGGCAGCATGCGGCATTAACGCAGATGAAGAGTTCACAGGACTGTGCACTGAGATCTTCAAGAAAGACTCTGTCCTGCATGAGCTGAAGGTGTATTACTTCATACACTTGAGTGTGCAGGAGTTCCTTGCTGCGCTGCATGTGTTTCTTTGCTACTTGGAGCTGGAAAAAGACATGAACTTGACAGATAGTGACCTGATGTTCTTCCTGGAGGATTCACGTCCAAAACAGAAGGAGCTGTTGCACGTTCTGCTGAGGAAGGCGATCGATAAAGCGGAGAAGAGCGATCGAGGGCATTTTGATCTCTTTCTGCGGTTCCTGCTGGGCATTTCTCTCGAGTCCAATCAGAAG
Associated Phenotype:
Not determined