ZMP
pcdh10a
Ensembl ID:
ZFIN ID:
Description:
protocadherin 10a [Source:RefSeq peptide;Acc:NP_997736]
Human Orthologue:
PCDH10
Human Description:
protocadherin 10 [Source:HGNC Symbol;Acc:13404]
Mouse Orthologue:
Pcdh10
Mouse Description:
protocadherin 10 Gene [Source:MGI Symbol;Acc:MGI:1338042]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32618 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa32618
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000076443 | Nonsense | 449 | 1000 | 4 | 7 |
| ENSDART00000105494 | Nonsense | 452 | 999 | 3 | 6 |
| ENSDART00000127020 | Nonsense | 433 | 868 | 1 | 3 |
Genomic Location (Zv9):
Chromosome 1 (position 12125557)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 12078469 |
| GRCz11 | 1 | 12765269 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACGAAAACGACAACGCGCCCAGATTCATGCAGTCGGTTTACGACGTGTA[C/A]GTAACAGAGAATAACGTCCCAGGCGCTTACATTTACGCGGTGAGCGCCGT
Long Flanking Sequence:
TCGCGCACCGGGAGGATTGAAGTGACCGGTGAGGTGGATTACGAGGAGAGCAGCACGCATCAGATATACGTGCAGGCTAAAGACATGGGGCCGAACGCAGTGCCCGCGCACTGCAAAGTTCTGGTCAAACTCATCGACGTGAACGACAACACTCCGGAGATTAGTTTCAGCACGGTCACGGAGTCGGTGAGCGAGCAGGCTGCCCCGGGCACTGTGATCGCTCTCCTGAGCGTCACGGACCGTGACTCCGGCGAGAACGGACAGATGACCTGCGAGCTGCACGGCGAGGTTCCGTTCAAACTCAAGTCGTCTTTCAAAAACTATTACACGATAGTCACGGACGGCCCGCTGGACCGCGAGAAAGCGGAGTCATACACGCTCACGGTGGTCGCCAAAGACAAGGGGGTACCCTCTCTCTCTACGAGCAAGTCCATCAAAGTGCACGTTTCAGACGAAAACGACAACGCGCCCAGATTCATGCAGTCGGTTTACGACGTGTA[C/A]GTAACAGAGAATAACGTCCCAGGCGCTTACATTTACGCGGTGAGCGCCGTGGATCCAGATGTTGGACAGAACGCATATGTCACTTACTCCATATTGGAGTGCGAAATACAGGGCATGTCCATCTTAACCTACGTGTCGATCAACTCCGAGAACGGCTACCTGTACGCGCTGCGCTCCTTTGATTACGAGCAAATCAAAGAGTTCAGTTTCATGGTGCACGCCAAAGACTCCGGTGCGCCCGAGCTAACGGCCAACGCCACTGTTAATGTCATCATAGTGGATCAGAACGACAATGCCCCGTCTGTAATTGCGCCTCTGGGCAAAAACGGCACCGCGAGGGAACATTTGCCCCGCTCAGCCGAGCCAGGTTACCTGGTGACCCGTATTGTGGCCACGGACGCGGACGATGGCGAGAACGCGCGCCTGTCCTACAGCATCCTCCGCGGAAACGAGCTCGGAATGTTCCGAATGGACTGGAGAACAGGCGAGTTACGCACCGC
Associated Phenotype:
Not determined