ZMP

sema5a

Ensembl ID:

ENSDARG00000058821

ZFIN ID:

ZDB-GENE-030131-8969

Description:

Semaphorin 5a [Source:UniProtKB/TrEMBL;Acc:B6E511]

Human Orthologue:

SEMA5A

Human Description:

sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and sh

Mouse Orthologue:

Sema5a

Mouse Description:

sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and sh

Alleles

There are 7 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa32482	Essential Splice Site	Available for shipment	Available now
sa24468	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa32482

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000081759	Essential Splice Site	224	1078	6	21

Genomic Location (Zv9):

Chromosome 24 (position 17116559)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	16423035
GRCz11	24	16567454

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGGCTTCCACCTCTGCGTACTGCTCAGTACAACTCCAAATGGCTCAATGG[T/G]AGGCTTAAAATATGAATGAAAGATTGAATTGAATTGAATTGAATTGAATT

Long Flanking Sequence:

CAGAAGACATGGCCAAAAGTTGGAAGAACATTTCTACTGTAACGAATGATTTGAACGGTGAAATAGTTTTCACTGCTACATCAGCTCCTCTGGCTGAAACTAACAACTAACTTAAATGAAAATGTTTGGATGTACAGTATTTTCTCTGCACAGATACTGTATTTATTATATATATATATTTTTTTTTTGTTTTGTTTTTTTCAATTTGTGTTTACCTAGATATTTGCTAGCCTTTGAAATTGAAGAAGTGCAGTATTTCTGAATTCAATCTCTTTCTCTGTACAGCTGACTAACCTGACTGAGGTCCATGATCAAATCAGTGGGATGGCACGGTGCCCCTATAACCCTCTGCATAATTCCACCGCCCTCATCACTTCCAGTGGAGAACTGTATGCTGCAACTGCAATGGACTTTTCAGGCAGAGACCCAGCCATCTACCGCAGCTTGGGAGGGCTTCCACCTCTGCGTACTGCTCAGTACAACTCCAAATGGCTCAATGG[T/G]AGGCTTAAAATATGAATGAAAGATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTAAAATGAATTGAATTGAATTGAATTGAATTTATTTGAATCGAATTGAAAACAATTGAGTAATCTTAGTTTAGGCATATATAATTTCATGAAAACGTAACAAGTTAGGGTAGTTCACCTAAAATTAAGATTGGGTCATTGTTCATTTACTCTCATTTAATTCCAAACCAGTGTAACTTTCTATTTGTAACACAAATGGAGATTTTACAGTATACAGACTGGCAGTCTCCATCACTTTTATTGACTGAGACTGTCATCTATCATCTGTGTTTTTGCTAATTTAAGGACGGAAAATCTGCCTTGCGCCATGGCGCATAGTCTAAAAGGGTTGAGTTTATTTTCTTAATGAGTTATAGGTGTGTTTTGAGAATAAACCAATTAGAGTCTCATCTCCCATTCCCTTTAAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa24468

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000081759	Nonsense	739	1078	15	21

Genomic Location (Zv9):

Chromosome 24 (position 17195799)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	16502275
GRCz11	24	16646694

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCAGTGAATATCTCAGACAATGGTGGCCACTACGAGCAGCGCTTCAGATA[C/A]ACCTGTAAAGCTCGAGTCCCAGAGCCCGGCCTGCTGGAAGTTGGACGACA

Long Flanking Sequence:

GAGTTTAGATAATGAAGTGGCCAGCTCAATCATCTGACCTCAACCCAATTGAAAACTTCTGAGATGCATTTTCTGAGTCTCAAGTGTACTTTGTACATATTACTGGGTATAAATATTACAAATTAACATATCATACTCAATAAATTGCTATATATATATATATATATATATATATATATATATATATTAATTATGCATTTATCCTACTAAAATGGGTGTGGTTTTGTTTATTTTAACTTTGATAAGTATTGATCCACTTCAAATTTTCACTACTGTATATTTAATCTGGATATAAGTAATCTGTATTTTAAACTGTGTAAATGTATAACATATAATATACTTCATATAATATATAATATATTTCATTGCTTTTTTATACAGGAATTCCAGTCCTGTAACACCCTCCCCTGTCCGGATCTGAAGAAGACCACGCCCTGGACCCCATGGACCCCAGTGAATATCTCAGACAATGGTGGCCACTACGAGCAGCGCTTCAGATA[C/A]ACCTGTAAAGCTCGAGTCCCAGAGCCCGGCCTGCTGGAAGTTGGACGACAGCGAATCGAAATGAGGTACTGCTCCAGCGACGGCTCCACGGGCTGCTCCACTGACGGTGAGATCTCATTCTGTCTCCGTTCTTCATTCGTCACCCCGCTCTTTCCTTTTCTCCGCTCTCATCTGGCTCTTTGATAAAGTGAGCCCGCAGTGACTTTGAGGCAAAGCCACTTGATCTATTTGTCCATCAGGAGAAAGACAACATGATGTGTTCTAGAGCTTCTTTCTCTCTTTCTTTCGCTCTTTCTCTCATCTATGTGGGCTCAATACATCAGCTTTTGGAGTGGCGTCTTATTCAACAGAAGTGCTCTTGGCTGCATTCGGCCTCAGACAGACACAAGGAACATGCTAATGAAGTCAGATCAGCTGCTGTGATTTATTTATTTATTTTTTAATTAAAGGAATAGTTCACCCTAAAATGAAAATTACAACATAATTTACTCACTCTCAAA

Associated Phenotype:

Not determined