Busch Lab

ZMP

hoxc3a

Ensembl ID:
ENSDARG00000070339
ZFIN ID:
ZDB-GENE-980526-532
Description:
Homeobox protein Hox-C3a [Source:UniProtKB/Swiss-Prot;Acc:P28174]
Human Orthologues:
HOXA3, HOXB3, HOXD3
Human Descriptions:
homeobox A3 [Source:HGNC Symbol;Acc:5104]
homeobox B3 [Source:HGNC Symbol;Acc:5114]
homeobox D3 [Source:HGNC Symbol;Acc:5137]
Mouse Orthologues:
Hoxa3, Hoxb3, Hoxd3
Mouse Descriptions:
homeobox A3 Gene [Source:MGI Symbol;Acc:MGI:96175]
homeobox B3 Gene [Source:MGI Symbol;Acc:MGI:96184]
homeobox D3 Gene [Source:MGI Symbol;Acc:MGI:96207]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa37765 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa32461 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa37765
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082472 Essential Splice Site None 254 1 5
ENSDART00000082473 None None 250 None 2

The following transcripts of ENSDARG00000070339 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 36174251)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 36023904
GRCz11 23 36122707
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGGGTCTGTAGAAGTTCGACTCTCCCAAATGGATCCCAGGCGGCTGCC[G/A]TAAGTTAATAATCTTGTTTTCCTATTTTTTAATTAAATGTACTTTCCTCA
Long Flanking Sequence:
CTAAAAAATTAAATACAGTTAGCTAGTCAATTTATACTACTGATCCAAAAGTGCTTTCATTTCAGAATCGTCTCACTCACCTATATCGAAGGTTCAATGTAAATTTCCATGCTTCTTTCAATTTCTACACTCGCAATCTTGACCGAAAGGGCCACATTGCGAGTTACTGTGGTTAGTATGTTGCTTTTTACACAAAGCCCTCTTTTTTAGCCCTCTTGCTACGTATTTTGAAGTTTAGAGGGTTATTTATGCCAATTGCCCAAAGCAGGACCAGTGAGTGGTGCAGGAAGAGCACGTGGGGTCATTAAAGTGGGTTTTATGGCCTGCAAGACCTGACAAACCCTCAATATATTTACATCATATATAATGTTAACTGTCCGTAATCGCAGCTGTTGGCTACTCTTATCTCTGAGAGAACGGCTTAGAGCCTGTTAGTGCGGGTTACTCGCGTCAGGGTCTGTAGAAGTTCGACTCTCCCAAATGGATCCCAGGCGGCTGCC[G/A]TAAGTTAATAATCTTGTTTTCCTATTTTTTAATTAAATGTACTTTCCTCAGCAACACCCTCGGGAATTAATCAAAGATGTAATTTAATAGTTCTTGGAGAAATTGTGTCAAGTGGTGCGCAAATCTGTTCTCATCTGTTCACGTTTTCTGAGGTCCAGAACGTAGGCTTGTGCATTTGTATATAACTGTTAATTTGGCACTCATGTGGAATTATTGTTCTGGCGATAGATACAAATCGAATTCTCTATATCATGATTCTTAAGTACTCTAAAACATCTTAAAAGCATTGTAATGTGTGAACAGATTTGCATCAGATCGTTTTGTTTATATGCACAGAAATGTTTGCGTTCTCGTATCAATTAATATGCTCAAAAGTGCATAGTTTGTGCCTAGGATGTGTATGTTGTGGAAAAAGGGAAGGTGACGGAGTGTGAGAAGCCAAGTGATCTTGTATTGGTTTGTAGATGAGAGCGCAGAACATAGATCTTTAGATCGGACAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32461
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082472 Nonsense 24 254 3 5
ENSDART00000082473 None None 250 1 2

The following transcripts of ENSDARG00000070339 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 23 (position 36196709)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 36046362
GRCz11 23 36145165
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCGAGTGCGCAAGGCTATTGGAGGAGGCCACCACGTGACTACATTGTTTA[C/A]TCTTGTTGGCAAACAATTAAAGACGCGAGTAAGTGTATTTTTTGGCTTTC
Long Flanking Sequence:
GCAACTGAAGAACATTGGCAAGCGTAAGGAACTGTTGTTAGATCAGCAAAGTGTGAAATGAATAGTTATTTAACCATAAAGCTAAACAAGTCGATCATTTTTAAATACCTACCACAAGAGGACTGAAAAGTCAGTCAAAGATTTAAACATTGTTTTATAAAACATTATCACGGAAATTAAGTCAGTATTCTTCAATCCATTGAAGCAAAAACTAAGACGACGCGATCCCAGACATGTCTTTTCTCTGTCCAAAATGGGTCTCTCTCTCTCTCCCTCCCACCTCACGCTCTCTGAACTCGTGTCAGCACGATGACAGGGTAATGTATGCGCCCTGCTCATGGTTTTTCGTCTGTCCACAGGAAAATCACTCGAAATGGCAAAACAGTCGAAGAATGCGGATGAAAACGGAATCACCGTTTGGCTGCTTACATGCAGTTTACAACTCAAACACCGAGTGCGCAAGGCTATTGGAGGAGGCCACCACGTGACTACATTGTTTA[C/A]TCTTGTTGGCAAACAATTAAAGACGCGAGTAAGTGTATTTTTTGGCTTTCCTACACCTCGAATGAACAATTATATATTTCGGGTGATTAGGACGATTAGAAATGAACAATAACTCGTTTCACGAATATAATTTTAACAGTGAATACTTAAACAAAATATGTTGCAATAAATCTTATGTTTGTTATATGGGGCAACATTTCTCCCCCTGTGCTCTGCAGGAGAACAGTTCTACGTGGAAACGACATGCTGAAGAAAGTTCATCAGAAAATGATAAAGGCAACGTGTGGAACTTTCAAAACCTCTCGAATGTCCAACATCCCTATTCATTCTCTGATGATGGCAACCACTCTTTGGACCCTGCGAATGCATTGGAAAGAGAAAAGGCATGTGAGCTGTCAACTTCCTGCTTATCAACCATGAAGTACCCTTGGATGAGAGAGACACATGCACCCACGCACTTCAGCTCCATTAACGCCATGGAATCAGGTGAGAGAACACGA
Associated Phenotype:
Not determined