ZMP
smc1a
Ensembl ID:
ZFIN ID:
Description:
structural maintenance of chromosomes protein 1A [Source:RefSeq peptide;Acc:NP_001155103]
Human Orthologue:
SMC1A
Human Description:
structural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:11111]
Mouse Orthologue:
Smc1a
Mouse Description:
structural maintenance of chromosomes 1A Gene [Source:MGI Symbol;Acc:MGI:1344345]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32449 | Nonsense | Available for shipment | Available now |
| sa32450 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa32449
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078148 | Nonsense | 3 | 1232 | 1 | 26 |
Genomic Location (Zv9):
Chromosome 23 (position 28936224)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 28766791 |
| GRCz11 | 23 | 28693332 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCAGCGCATCTAACACGCCCCTCTCTGAACAATCAGACAGTATGGGATA[T/A]TTAAAACTAATCGAGATCGAAAATTTCAAATCATATAAAGGACGCCAAAT
Long Flanking Sequence:
CGGTTGATGTTGTGATCTTCGATGTCGTATGCAATGCATATTATTGTATTTTAGTATTGCATAGTTTGTTGTGGGGTAAAGATGCAGAAGGGCATTAAAAATTGTTTTTTTTGTATCATTATCATAGTTCATATTCAGGTCATGTCATGGTACTTAAAAAGAGACTGAGGGAAGCAAAATACTCGAATATGTTTTTGCGTGTGTTTGCTACCAAAATGGCCTGAGCGCGCCATATCTGTAGGACTTTTATTTTGCCTGAATTTAGCTCTAGACAGGGGGCGTGTTCGCGACGCGTCTGGGCATTTAATTCAGTGCGTTATAAAATAATCTTACAAGATTATTATGGTTTCAGTGGTTTACATTAACCTCTGAAACACAGTATTAAGCATCTAATGACCGTTTTTGTCTCCAATTAAACGACGTTTGTAGTAGCTCATCGACACAGAATTCAGCAGCGCATCTAACACGCCCCTCTCTGAACAATCAGACAGTATGGGATA[T/A]TTAAAACTAATCGAGATCGAAAATTTCAAATCATATAAAGGACGCCAAATAATAGGACCGTTTCACAAGTTTACAGCAATAATTGGGCCAAATGGATCAGGTAAGTGTTTTCTCATCATGTTCTGATGCAGCGCAGTGCCTGCAACACTGCTCAGCTCTAATAACGTGCAAAGCTGTATTAACGCTGTATTAACATAAATCCAGCTATAGCTATGTTTCTGGCGTATAAATGAATTACTTTTCCTTTTTATCAACGTCTGTCACGTTTATGCCTAGTGGTTGTTTTTTATTGCCACGTATTTCTGCCATTCTATTATATTCAGCAGGTCCCATCTAAACGTCTTAGAAATGTAAAGATTAGTCAAATAATTATGTGCATTCAAAATGTACTTCGCTATTAATTTAAATGATAACTAATATACCTTGCTAATATTAACCATGGCCTTGCAAAAAAAAATGTATATACATAGAAAAGAATATAGAGAAAATAAAGACCAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32450
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078148 | Nonsense | 436 | 1232 | 8 | 26 |
Genomic Location (Zv9):
Chromosome 23 (position 28941781)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 28772348 |
| GRCz11 | 23 | 28698889 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAAAATAAAGCAGAAGATCCGAGAGATTGAAGAAAACCAGAAGCGTATT[G/T]AAAAGCTGGAGGACTATATTGCAACCAGCAGGTATTTTAGTGAACATTAT
Long Flanking Sequence:
CAGAAGATGTACAAGAAGCGTAAGGCGGACATCGAGGAACTGGACCGTGAGCAAGGGGCTGTGGAGATGTCAAGGCAGGAGTTTGAGGAGCGGATGGAAGAAGAGGCACAGAGTCAAGGCCAAGATCTGACACTGGAGGAGAACCAGGTCAGTCTATGTTAATTGCTTGATGTACTACATGAAAAACGAGGCATACAGCTTTCATTTTACACTTATACTGTTATTTCAGGTAAAACAGTATCACAGGCTGAAGGAGGAGGCTAGTAAGCGGGCAGCTACTTTGGCACAGGAGCTGGAGAAGTTTAACAGGGACCAAAAGGCTGACCAGGATAGACTTGATTTGGAGGAGAGGAAGAAAATTGAGACTGAGGTACAGTGAGAAATTTATCATATTTTTTTGTGCCTTTGATTGGCTGATTTATCATGTTATGTTTTTGATTAAACTACAGGCCAAAATAAAGCAGAAGATCCGAGAGATTGAAGAAAACCAGAAGCGTATT[G/T]AAAAGCTGGAGGACTATATTGCAACCAGCAGGTATTTTAGTGAACATTATAAAATGTCTTCAAAAAATCAGCAAGGTTTTCTTGATATAAGAATAGTTCCTTTATGGCCATCTGTATATTTATACAATATATAGAAAAGAAACAACATATAATATAGCCTAATACAATATATAAATATTATTTTATTCAGTGAGTATACATTAAAAAGTAAAAATAAAGACAAAAAGTAATCATAAAGACTTTATTAATCAAAGAATCTTGAAAAAAAAATCTGCAAAATAATTTTAAGAAAATCCAAAAATATTTAACTGTTTTCATTATTGATAATGATAAAAATGGTTCAAATTATTAAAAAAATGGGCCAAACTAACTAATTTCTGAAGGATCATTTTATATAATAAATATATGAAAATGTTAATTCTTTTTATTTCAAATGTTATTTTGGCAGTTCATCCACTGTGGCAACCCCTGATTAAGGGACTAAGGCGAAGGAAAATTAA
Associated Phenotype:
Not determined