ZMP
si:dkey-158a20.2
Ensembl ID:
ZFIN IDs:
Description:
Novel protein similar to vertebrate RAR-related orphan receptor family [Source:UniProtKB/TrEMBL;Acc:
Human Orthologue:
RORB
Human Description:
RAR-related orphan receptor B [Source:HGNC Symbol;Acc:10259]
Mouse Orthologue:
Rorb
Mouse Description:
RAR-related orphan receptor beta Gene [Source:MGI Symbol;Acc:MGI:1343464]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa322 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa322
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122742 | Nonsense | 49 | 480 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 2 (position 50002448)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 49698218 |
| GRCz11 | 2 | 49432448 |
KASP Assay ID:
554-3297.1 (used for ordering genotyping assays)
KASP Sequence:
GTTTTTTCMGACGCAGCCAGCAGAATAATGCCATGTACTCGTGTTCACGG[C/T]AGAGRAACTGCCTGATTGACCGAACCAACCGCAACCGCTGCCAACACTGC
Long Flanking Sequence:
ATACTATAAAGCTCCTTTTGTTAAAATTAGTTAGTTTACCAAGACTGTTTATGAAAATGACTTTTAAAATGTTTATTAATCCTAACATTGGTGCTGTTAATTTCTTTAAAACTAACTGAAAGTCAAAAGATGATTTATTTAGTGGAGTTAATAACTAATAGTGATGTTTTTGTTATTATTCCTGTTACCTAACACTCTTATGTCAGTATAATGATGATACTGTATATCATGATTAATGCTTCAGCTATTATAGGAACAATAAAATGTGATACCATCAAATGCATGCTTGTGCTCTGCCCTCCTTTTCTTTTATCCCGATGTGTTTGTCTTCTTGTTTTCTGTGTTAGTTTATACTACTTAGTCATTTGATGCTAGGGCACACCTATAAAAGCCTCACCTGATATTAGCCATCCTGCACACTGACGTAATGATGTGTTTTTTCGTTCCAGGGTTTTTTCCGACGCAGCCAGCAGAATAATGCCATGTACTCGTGTTCACGG[C/T]AGAGAAACTGCCTGATTGACCGAACCAACCGCAACCGCTGCCAACACTGCCGTCTGCAGAAGTGCCTGGCGCTCGGCATGAGCCGCGATGGTGAGTCTGAATGTTAAACTAGCCCAATGGCTGACTTAAAACTGAGTTTTAAGACTCAAATGTTTACCCAAATGTGTACCCTCAGTATTGAAAGAGTTACAGATGTTTCGCCAATCAAAATAGTTCCTAACAAAGCCTGATTAGAACAGTCGCGGGTCCCAGAGCAACACCGCTGTGTTTCATTTCTGAAGGATTCTCTATTTTACCCTTCAGAGCCAAAAAACAATGATCCATTCATGAAGACAGTTTCCAAATGAATCAGCAGTTTTGAATGAATGTTTTGAATATAAGATGCTGCCACCTGCTGGTGATTTCAGTTTCTTATTTATCTATGACAGGTGAAAGTACCAGCACAAAAACACACTTGACAAAATATTAATTATCATTAAAAAAAAAATAAAAATCCCCCA
Associated Phenotype:
Not determined