Busch Lab

ZMP

trabd

Ensembl ID:
ENSDARG00000010445
ZFIN ID:
ZDB-GENE-030131-1301
Description:
traB domain-containing protein [Source:RefSeq peptide;Acc:NP_997788]
Human Orthologue:
TRABD
Human Description:
TraB domain containing [Source:HGNC Symbol;Acc:28805]
Mouse Orthologue:
Trabd
Mouse Description:
TraB domain containing Gene [Source:MGI Symbol;Acc:MGI:1915226]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa2982 Essential Splice Site F2 line generated Not yet available
sa36599 Nonsense Mutation detected in F1 DNA Not yet available
sa15109 Nonsense Available for shipment Available now
sa32193 Nonsense Available for shipment Available now
sa13996 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa2982
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008035 Essential Splice Site 84 360 5 10
ENSDART00000145842 Essential Splice Site 83 103 5 5
Genomic Location (Zv9):
Chromosome 18 (position 14482414)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 14927832
GRCz11 18 14896344
KASP Assay ID:
554-3321.1 (used for ordering genotyping assays)
KASP Sequence:
TAGCAGCTGRTTGATCAAATGTTGTTTTKAATRAATGCTTYTTTTGCTTC[A/G]GACGATCCGAGCRGTCCAGCCTGATGTAGTAGTGGTGGAGCTGTGCCAGT
Long Flanking Sequence:
TTGTGGCAGGTTCGGACCCAGCGACGGCAGAAGGAGCCTGATCTGCCAGAAACTGTGACGCGTCTCACCACACCTGAGGGTAGTGTTGTGTACCTGGTTGGCACTGCCCACTTCAGTGACAGCAGTAAGAAGGATGTTGCCACTGTAAGCACTGGCTTTCTCCAAAGATATTTGTATGCACTAACAACCAGCATTTAATAGTTGAACACCTTTTTGTTCATATAGACCATTTTGAGGGATTTATACAAAAACAATGGTCCCAACGTATTTCCTGTTTCACATTTTTCATTTCTATAGCTTCCGAGAATCCAAAAAGGGACACATATTAATAAATAATGTTACGATAACTCTTAATATGAAGTTATGATTGAATTGCCTTTTGTTACATTTATGAAATAGTTTGATAACAAGCAGGAAATGTTCATGACATCACCACATTAAAATGGTCTGTAGCAGCTGATTGATCAAATGTTGTTTTGAATGAATGCTTTTTTTGCTTC[A/G]GACGATCCGAGCAGTCCAGCCTGATGTAGTAGTGGTGGAGCTGTGCCAGTACAGAGTATCCATGCTTAAAATGGATGAGAAAACGCTGCTAAAAGAGGCTAAAGACATTAACTTGGAGAAGGTCCAGCAGGCCATTAAACAGGTCAGCCATGAGACGGAAGACTGTGCTGACATAGTATTATATTGTCAAACACTTTCATCTGGATGCTTTTATCGACATGTAGTGTTACTTGTAATTACTTTCAAAGTGTAATAAAATTTCTGATCACTCTCAAATAGTAAAGGATTATTTAAATGAAATTATTTAATTATAGTTTCTTAATCTGAACTGCTAGAAGGTGCATATTTTGTTGGTCGTGACTGGAATGATGCGAGTCATTGTCCTCATTACATATTATGGGACTCCTGCAGAATTCATGTTCATGGATGAGCTAAAGTATTCTAAACTTATTATCTTGGTAGTTTGATGCAAAGTAAGGCTGTTAATTGTCGAAGCAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36599
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008035 Nonsense 121 360 5 10
ENSDART00000145842 None None 103 None 5
Genomic Location (Zv9):
Chromosome 18 (position 14482300)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 14927718
GRCz11 18 14896230
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTTAAAATGGATGAGAAAACGCTGCTAAAAGAGGCTAAAGACATTAACT[T/A]GGAGAAGGTCCAGCAGGCCATTAAACAGGTCAGCCATGAGACGGAAGACT
Long Flanking Sequence:
AGTGACAGCAGTAAGAAGGATGTTGCCACTGTAAGCACTGGCTTTCTCCAAAGATATTTGTATGCACTAACAACCAGCATTTAATAGTTGAACACCTTTTTGTTCATATAGACCATTTTGAGGGATTTATACAAAAACAATGGTCCCAACGTATTTCCTGTTTCACATTTTTCATTTCTATAGCTTCCGAGAATCCAAAAAGGGACACATATTAATAAATAATGTTACGATAACTCTTAATATGAAGTTATGATTGAATTGCCTTTTGTTACATTTATGAAATAGTTTGATAACAAGCAGGAAATGTTCATGACATCACCACATTAAAATGGTCTGTAGCAGCTGATTGATCAAATGTTGTTTTGAATGAATGCTTTTTTTGCTTCAGACGATCCGAGCAGTCCAGCCTGATGTAGTAGTGGTGGAGCTGTGCCAGTACAGAGTATCCATGCTTAAAATGGATGAGAAAACGCTGCTAAAAGAGGCTAAAGACATTAACT[T/A]GGAGAAGGTCCAGCAGGCCATTAAACAGGTCAGCCATGAGACGGAAGACTGTGCTGACATAGTATTATATTGTCAAACACTTTCATCTGGATGCTTTTATCGACATGTAGTGTTACTTGTAATTACTTTCAAAGTGTAATAAAATTTCTGATCACTCTCAAATAGTAAAGGATTATTTAAATGAAATTATTTAATTATAGTTTCTTAATCTGAACTGCTAGAAGGTGCATATTTTGTTGGTCGTGACTGGAATGATGCGAGTCATTGTCCTCATTACATATTATGGGACTCCTGCAGAATTCATGTTCATGGATGAGCTAAAGTATTCTAAACTTATTATCTTGGTAGTTTGATGCAAAGTAAGGCTGTTAATTGTCGAAGCAAAACTAGACCGCTGAAGCAATTGCTGATAAGAGATGAGCGTGACTCTGCACAAAAGCAGCAGAGCTTTTTTAGGCCACAGTCCACCACTGCTGGTTCTTTCAGTCATGATCACATGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15109
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008035 Nonsense 249 360 8 10
ENSDART00000145842 None None 103 None 5
Genomic Location (Zv9):
Chromosome 18 (position 14477911)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 14923329
GRCz11 18 14891841
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGAGATGATCGGCGAGTTTCCAGCCCTCCACCGCACTATTGTWGCAGAA[C/T]GAGACATCTACCTCACACACACACTTCGACAGGCAGCGCGCTGTGTRGAG
Long Flanking Sequence:
ACAGTTCCTTTAAGATAAAAAAAATCAATGATTCCTTGTGCCTTCACATTTAACTCTGTGAAATTATGCCAGCAAATATGTAAACTTGGTCACAAATGTGGTGTGAGATTCCATTTGAATATTTATTTTATTTCATTTGGTTGACTGAATTCACTCCACTGAAAGACAGCTTCTTTTTTTACCACAACTTTACACTAATGACAAGGTTGATTTTCATTTTGCATTGCAATACTGAGAATAAAATACATTTTGATGTTTAGTTAAACCTTGATTTTAAATCATCAGTTAATTGTCATTAAAATAATGCTCCTAAATCTAGTCTTTGTTTTACCTTGGCATGTTATTGTGTAATTTACATGAATTTTTATATACATTATATAATTTTTTTTTCTATCAGTAAGGAGGACGTTGAGAAATGCAAACAAAAGGATCTTCTGGAGCAGACCATGTCAGAGATGATCGGCGAGTTTCCAGCCCTCCACCGCACTATTGTTGCAGAA[C/T]GAGACATCTACCTCACACACACACTTCGACAGGCAGCGCGCTGTGTAGAGGCGCCTCCTACTGCTGAGAGTGAGTACTGCATCCTCTGCTCATGCTCATGTCTCGTCCAGTGCTGTAATCAGTGATTGGGGAAAAAGTCTTGAGTTTTAAGGTGCACTACCAGCACTCTTATTGTTAAATGGATGGTCCACCCAAAATGATTTACTCACCGTCATGTCATTCTAGAGCTGTAAGACTTCTGTATCTGTGGAACATAACGGTAAATATTTTGAAGCACTTTGGTAACCAAATAGTTTTGTTACACTTCCAACTCACTTCCATTGTATAGTAAAAAAAATGGAACACAAAATTTACTTACTATCATATCTTTTTTTTTTTTTTTTTTTACTTTAAATAATGGAAGTCACACTTTTGGAACAGCATGAGTCAAAGCTTAAAGTTCATTAAAATAAATTTTTAATGAAATATAAAGTGTATATGAAAAGCCTAAAGTTTAAAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32193
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008035 Nonsense 259 360 8 10
ENSDART00000145842 None None 103 None 5
Genomic Location (Zv9):
Chromosome 18 (position 14477881)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 14923299
GRCz11 18 14891811
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCGCACTATTGTTGCAGAACGAGACATCTACCTCACACACACACTTCGA[C/T]AGGCAGCGCGCTGTGTAGAGGCGCCTCCTACTGCTGAGAGTGAGTACTGC
Long Flanking Sequence:
ATTCCTTGTGCCTTCACATTTAACTCTGTGAAATTATGCCAGCAAATATGTAAACTTGGTCACAAATGTGGTGTGAGATTCCATTTGAATATTTATTTTATTTCATTTGGTTGACTGAATTCACTCCACTGAAAGACAGCTTCTTTTTTTACCACAACTTTACACTAATGACAAGGTTGATTTTCATTTTGCATTGCAATACTGAGAATAAAATACATTTTGATGTTTAGTTAAACCTTGATTTTAAATCATCAGTTAATTGTCATTAAAATAATGCTCCTAAATCTAGTCTTTGTTTTACCTTGGCATGTTATTGTGTAATTTACATGAATTTTTATATACATTATATAATTTTTTTTTCTATCAGTAAGGAGGACGTTGAGAAATGCAAACAAAAGGATCTTCTGGAGCAGACCATGTCAGAGATGATCGGCGAGTTTCCAGCCCTCCACCGCACTATTGTTGCAGAACGAGACATCTACCTCACACACACACTTCGA[C/T]AGGCAGCGCGCTGTGTAGAGGCGCCTCCTACTGCTGAGAGTGAGTACTGCATCCTCTGCTCATGCTCATGTCTCGTCCAGTGCTGTAATCAGTGATTGGGGAAAAAGTCTTGAGTTTTAAGGTGCACTACCAGCACTCTTATTGTTAAATGGATGGTCCACCCAAAATGATTTACTCACCGTCATGTCATTCTAGAGCTGTAAGACTTCTGTATCTGTGGAACATAACGGTAAATATTTTGAAGCACTTTGGTAACCAAATAGTTTTGTTACACTTCCAACTCACTTCCATTGTATAGTAAAAAAAATGGAACACAAAATTTACTTACTATCATATCTTTTTTTTTTTTTTTTTTTACTTTAAATAATGGAAGTCACACTTTTGGAACAGCATGAGTCAAAGCTTAAAGTTCATTAAAATAAATTTTTAATGAAATATAAAGTGTATATGAAAAGCCTAAAGTTTAAAGAATAATTAGAAAATACCAGAGCCAATTATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13996
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008035 Essential Splice Site 304 360 9 10
ENSDART00000145842 None None 103 None 5
Genomic Location (Zv9):
Chromosome 18 (position 14472525)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 14917943
GRCz11 18 14886455
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCATCGAGAGGAACTGGGATAAAGAGCTCAACATCCATGAAATCATGAGG[T/C]GCGTATCRGTATGGTACTTTGGTGCAATGTAAYACCAGATCTGTCATAAC
Long Flanking Sequence:
GTTGTGCAATAAGTCCATATATTGATTATTGTGACAGGCCTAGTTCATACTAACAACTGAATTAAAAACAACAACAACATCTGTTTGCATTTACTCACCACAAACACATCTGCATAATCTGATTAGTTGTGTTAATCTTTTTAGCATTTGGTCCATGTTCATGATATTTTATGTATTCATTTAATTATTATTCATTTGATTGCCAGAATATAATTAGCCTTTAAATCTGGATTTGTTTTTTTTTTTAAACAGTTGGGTGATGCTTATTGTTTTATCAGCCAACGCAGTTACTCAGTATCACTATCATAGAGTATAAACAATACTAGGATAACACTGCCAGAGCTTCCTTAAGCGTTCTGTTACCTGATACATGAAACCTTTTGTTCGTACTTTGTTTCTCAGAAGTGCCTGCTGTGGTGGTTGGGGTGGTTGGCATGGGTCATGTGTCTGGCATCGAGAGGAACTGGGATAAAGAGCTCAACATCCATGAAATCATGAGG[T/C]GCGTATCGGTATGGTACTTTGGTGCAATGTAATACCAGATCTGTCATAACAACAACAAAAATCTGTTTCCTTTTCTATTAGCGTGGCTCCACCGTCTCGTCTCGGCAGGGTGGTACGCACCGTGTTAAAAGGGGCCATGTGGGGGCTTCTAGGTTATGCCTGCTACCGGGCCAGCAAGGGTGTGGGCAGAGCGTTACTTTCCTTACCAACTGTGCAATCATTGCTTCAGAATATACGAACACCTTCCGTTTGACCCTTCTTTAATCTGTACAGACTTTCAGCAGTAACCACCAATAGCCTTAACTCTACAGGATGCTGGTTGGGTGAAGAGGAAGATTTTAGAGCAAAAAGCATCTCCATCCTACAGGAAATGAAACCGTGTGGATGGAAGTCTCTCTCTTTCGCCTACTCAACCTCTGTCCATCAGCTCTGTAGACTCAGAGCTGTACTGCCAAAGAAGTGGAGCGTGCTTTCATTTCCCTTTTCGACCCATTAGGAAT
Associated Phenotype:
Not determined