ZMP
prdm13
Ensembl ID:
ZFIN ID:
Description:
PR domain containing 13 [Source:UniProtKB/TrEMBL;Acc:A5XCE2]
Human Orthologue:
PRDM13
Human Description:
PR domain containing 13 [Source:HGNC Symbol;Acc:13998]
Mouse Orthologue:
Prdm13
Mouse Description:
PR domain containing 13 Gene [Source:MGI Symbol;Acc:MGI:2448528]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11161 | Essential Splice Site | Available for shipment | Available now |
| sa16464 | Nonsense | Available for shipment | Available now |
| sa32101 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11161
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000108510 | Essential Splice Site | 45 | 615 | 1 | 5 |
| ENSDART00000136759 | Essential Splice Site | 47 | 308 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 16 (position 35064403)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 32795903 |
| GRCz11 | 16 | 32749933 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACTGGGAAAGTATGTTTCGGACCGCAAGGAACTTGGAGTAAAAAAGAAG[G/A]TAAGTYCGTTTGATTTATTTCCTTAAAGAAAGGCGTTTTCTTGAAATATT
Long Flanking Sequence:
TCTCTGCCCTTGACAAATTGGATTTTGGGGATGGGAAGGTCGCTGGGGCCTATTGTCTCTTGACCGTTTGGAGCGGTTCATTATGCGTGAGGGTGAGGGAAAGTCTCCATGTGACCATCTCGGAGGGCTCTACAGCTGCTAAAAGAGCGCAACTCTCTCATAGCGCGCTGCTCGCCCTTGCGCATTAATGTGCCGAGGGGTACCTGACTGCGCCATAAGAAAAGCCGGATCACACACGCCACCGCGTCACTTGGCGGGCGGATATTAGTCTGTCCTCATCTCAGACTCTCTGCTCATCTCAATCAGCGCCTGCTTGGTCCTCCTGGTTCTGACAGCGAAAGCCCCACACAGAGCCAACCATGCAAACGACTCGGACACCCACTATCAGCGTGTACGCCGACTGCAGCATCCCAGCCGGTCTTCGGATAGGACCGGTCCCGGGCATCTTCAAACTGGGAAAGTATGTTTCGGACCGCAAGGAACTTGGAGTAAAAAAGAAG[G/A]TAAGTTCGTTTGATTTATTTCCTTAAAGAAAGGCGTTTTCTTGAAATATTTTATAACTTTTGGAAGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATGAATACTGAGAAAATTATTTTGTTTGTTTTTTGAATTACAAATAAATTAAGCGTTCGTGCATGACATTTTAAACGAGATGGCAAATTATTGCAAATGCAATGCCTGTAAATATGCATTTTAATTGTATTTTTATTTAATAATCTAAATGACAAATAATATAAGTTAAAATGAAATAAAAAAGAAACGTACAATGACTATTATTATTAATAATTATCATTAATACTATTATTGTAATTATTAATGCATTATTATGATGCGTATTATAATTTTAACAGTGTTATGTTAAAGAAACAAAGCATCTTTAAAAGCACAATTTAAGTAGGCTATTTCTATGCAGTAAAATAAAAGTTTACATCTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16464
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000108510 | Nonsense | 137 | 615 | 4 | 5 |
| ENSDART00000136759 | Nonsense | 139 | 308 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 16 (position 35068317)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 32799817 |
| GRCz11 | 16 | 32753847 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACTAATGGTTATGACATTTTGTTTCAGGTGAGGAGCGATACATTTGCTG[G/A]TATTGTTGGAGAATATTCAAATACCCGAACACCTTGAAAGCTCATGTGCA
Long Flanking Sequence:
ATTAATCTCAATAAAAAAATAATCCTAATGACTTTAGTGGTTCTGGGTCATAAATGACATGTTTAAAAGAATCTGTCTAAAAGGGAAATTTCCACAAAACTTTTTTTTTTTGAACCACAAAATTAAGTTTGGCCTCATAAAAAAAAAAAACTTTTTGCAGGTGAAAAAAATCTCAGTAAATATGCTAATAAAAAGTTTATGATAAGTGAACAAAACTATTATTTTTAATTACAATTTTATATTTAACAATTTGATATACAATGTCTTTCAGTTAAAGAGTTGAGGGTGCAGTATCAAACGTTTCCACTAAATTAATATTGTCTCACGTGTCCACTGCTATCATTTATGGCCACAAACAACACAAATGTGTGCATTTTATCCAAGACATTTTTACTTTAAATTCATGTTCATGGTTTGATAGCAAAAGGAAGTGTTAATAATTATGACAACAACTAATGGTTATGACATTTTGTTTCAGGTGAGGAGCGATACATTTGCTG[G/A]TATTGTTGGAGAATATTCAAATACCCGAACACCTTGAAAGCTCATGTGCATTTCCACTGCGCCTTGAGCAACGGAAGAAGCTTAGTGAGCAACGAGCAAGTGAGGGGCACAGACAACTTCAACAGATCTCCAAAATCCGGGGACATCCCTAACACGTCGACTTCTCCACGAAACGGCCACAGCACCTTCATGTCAGACGCGGTAAAACGCGTCGCCTCTACCTCGCCGTTCGCTAACAAAGCGAAAAAACCGACCGCGGAGGAGCAGGACAGGGCCCTTGACATGAGCGTGACCTCCGCCAGGAACCCCGGACACATCTTGGGCCTCGGCGGGACACCGTCTGTGCTCAACAGCATGGGCTTCCATCCGGGCGTGCGCTCTGCTTTCAAGCCAATGGGACTTGCGAAGATATCCCCTGCTGAGGTTCCGAGAGATGAGCATAATGTCAAACCAAACAGCATTGGGTTTAGCAAACTGCTGGGGAACATCAAGTCAGTGCG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32101
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000108510 | Nonsense | 515 | 615 | 4 | 5 |
| ENSDART00000136759 | None | None | 308 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 16 (position 35069451)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 32800951 |
| GRCz11 | 16 | 32754981 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGTTGAAGATTCACATGAGGACTCATACAGGCTACAAACCACTCAAATG[C/A]AAAGTGTGCTTCAGGCCTTTTGGCGATCCGAGCAATCTGAACAAACACAT
Long Flanking Sequence:
GCTTTTAAACACGTTGACAGCCGCGTGCACCCTGCCCTGTCGCCCTCGCGCTACTCCCAGCTGCCGGCCGGGTTTCACTTCGAGAGGTTTTCCTTGCCACAGTTTGATGGGGGGAAATCATATAATGGAGACTGCAATATACCCATCATGCCATTCACAGTGTACAACGGAGAACTCCTTTATAGTTCCCCATACTATCCCCTAAAATTTCACTTTGGTAACCTGCTAAAATACCCAGACTACTTTGGCGCACCTGCTCTAAATCCAGATCTAAACTCGATCACGAACATCGATAGGGAGATCGCCATGCACACACAACAGCTGTCCGAAATCGCCGTGGAGAAGAACCGCTCACGACTGGACTCTTTGCCCGCTTCAAACCCCAACTCGGGCAAGCCCAAAAAGGGACACTTGTGTTTGTACTGTGGCAAGCTGTACTCTCGAAAATACGGGTTGAAGATTCACATGAGGACTCATACAGGCTACAAACCACTCAAATG[C/A]AAAGTGTGCTTCAGGCCTTTTGGCGATCCGAGCAATCTGAACAAACACATCCGCCTGCACGCGGAGGGAAATACGCCCTACAGGTGCGAGTTTTGCGGAAAGGTCCTCGTGCGCAGGCGGGATTTGGAGAGGCACGTCAAATCTAGGCATCCTGGTCAAAGCATAAAAAAATCCGACGTCAAAATGGAAGGCATGTTTGAGGACGGGGAGCAAAAAAGCGACAACGACAGCGACGTCGACGTTTGCTTCACAGATGATCAGAGCGACCAGGAATCGAGCAAAAACAATGATTAATGGGCCACTTTACGGACACACTAAAACAGACTTTTGCTCTTAAGTAGCTAAATTATGCATGTACATAAATTAGTAATGAATTGTTTGTTTATTTTATATAATTATTGTGAAAGAAAATGTTCCCTTATTAAATAAATAAATCTGTGAAGGAGGCACTCATGAAGTTGATCTCAAATCATGCTTATTGGAATTGAGGACATCTCAGC
Associated Phenotype:
Not determined