ZMP
sh2d4b
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to human and mouse SH2 domain containing 4B (SH2D4B) [Source:UniProtKB/TrEMBL;
Human Orthologue:
SH2D4B
Human Description:
SH2 domain containing 4B [Source:HGNC Symbol;Acc:31440]
Mouse Orthologue:
Sh2d4b
Mouse Description:
SH2 domain containing 4B Gene [Source:MGI Symbol;Acc:MGI:1925182]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa31920 | Nonsense | Available for shipment | Available now |
sa2711 | Nonsense | F2 line generated | Not yet available |
sa11975 | Nonsense | Available for shipment | Available now |
sa7371 | Missense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa31920
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000100895 | Nonsense | 100 | 450 | 2 | 8 |
ENSDART00000144045 | Nonsense | 100 | 441 | 2 | 7 |
The following transcripts of ENSDARG00000069374 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 13 (position 21744042)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 21473380 |
GRCz11 | 13 | 21603830 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACCATACGAGCTGATTGTCAAAGAGCTGATGGAGGAAAGAGCCAGGCGA[C/T]AGGCTCAACTAGAAGCCCAGGAGCTCTGGTAAGGACTAGGACCAACTCCA
Long Flanking Sequence:
CAAAAAAATTTTTATAAATTAACTTCATTTAAATTTCAGACATTTCTGTGTGGAGTTTGCATGTTCTCCCTGTGTTTGTATGGGTTTCTTCTGGGTGCTCCGGTTTCCCCCACAGTCCAAAGACATACGATATAGGTGAACTGAATATATTAAATTGGCCTTAGTATAGGTTGCAGCTAGAAAAAGACATCTGCTGCGTAAAACATATGCTGGAATAGTTGGTGGTTCATTCCGCAGTATATAGTAGACTAATTTAAGCATTTATTCACAAATGAAATAAATAAAATTTTGTGTTTTCTTTATTTGATATTTATGTAAAGTTACTTAATCCAGTTTGGTTTTTACATCTGCCTTTATGTCTGTCTCCAGAAAGCAGGAAGAGTGTCCAGTGGCTGCAGGGCAGAGATGGTGAGGTGTGGGTCTGGGTAATGGGGGACGCTCCTGGAGACAAACCATACGAGCTGATTGTCAAAGAGCTGATGGAGGAAAGAGCCAGGCGA[C/T]AGGCTCAACTAGAAGCCCAGGAGCTCTGGTAAGGACTAGGACCAACTCCATGATCTTTATCTGCATCTCATTTTATTTACAATATATATATATATATATATATATATATATATATATATATATATATATTAACGTAGAACAGGTAATCTTTTGTTGTAAAGATTTGACAATTGAGAATCAAACTTTGGGCATAAGCATGGAAGCATAAGGTTTATTTTGTCAGTCATGTTGGATAATACGCCTAAGAAAATAAATGCACAATGTTAAAGTTCCTACAATCTGTTAACATTCCACATATTTGGTCTTTTTTTTCTAGGCGTAGGAAAGAGGAAGAAATAAAGCAAAAGTTCAGAGATGCCATCACAAAGGAAAAAGCGCGCCTAGTTGCAGGCAAGTGGAAGGAAGAAGCAGAGGACAGGAAGGCAGCCAAGCAGGAAGAGGAACGAATACAAGAGAAGCTAAAGGTGATTGATCAACAAACTTCTAACTGTGCTGCAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2711
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000100895 | Nonsense | 136 | 450 | 3 | 8 |
ENSDART00000144045 | Nonsense | 136 | 441 | 3 | 7 |
The following transcripts of ENSDARG00000069374 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 13 (position 21744440)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 21473778 |
GRCz11 | 13 | 21604228 |
KASP Assay ID:
554-3316.1 (used for ordering genotyping assays)
KASP Sequence:
TTCAGASATGCCAWCACAAAGGAAAAAGCGCGCCTAGTTGCAGGCAAGTG[G/A]AAGGAAGAAGCAGAGGACAGGAAGGCAGCCAAGCAGGAAGAGGAACGAAT
Long Flanking Sequence:
GGCAGAGATGGTGAGGTGTGGGTCTGGGTAATGGGGGACGCTCCTGGAGACAAACCATACGAGCTGATTGTCAAAGAGCTGATGGAGGAAAGAGCCAGGCGACAGGCTCAACTAGAAGCCCAGGAGCTCTGGTAAGGACTAGGACCAACTCCATGATCTTTATCTGCATCTCATTTTATTTACAATATATATATATATATATATATATATATATATATATATATATATATATTAACGTAGAACAGGTAATCTTTTGTTGTAAAGATTTGACAATTGAGAATCAAACTTTGGGCATAAGCATGGAAGCATAAGGTTTATTTTGTCAGTCATGTTGGATAATACGCCTAAGAAAATAAATGCACAATGTTAAAGTTCCTACAATCTGTTAACATTCCACATATTTGGTCTTTTTTTTCTAGGCGTAGGAAAGAGGAAGAAATAAAGCAAAAGTTCAGAGATGCCATCACAAAGGAAAAAGCGCGCCTAGTTGCAGGCAAGTG[G/A]AAGGAAGAAGCAGAGGACAGGAAGGCAGCCAAGCAGGAAGAGGAACGAATACAAGAGAAGCTAAAGGTGATTGATCAACAAACTTCTAACTGTGCTGCAAAATGAGAATCTATTAATTGGCTTTAGTCAGACAAAAATTACTGCCAGCATTTCATACAGATCCAAACCATCTGCTATAGAGTGTCAGGGGATTAACTAGGAAGTGGAAGTCACAAAAGAAACAATCCAATCAATTACTCGTAGGAGACCTGCAATGATGTCCACCTTTGGGGCCTAACGTTCGTTTGAAGGGTGTTGTTTTCCTTCAAACTCTCTGTAAATTATTTAGGTAAGTGTGCGGAGCGGTTGCTGTATGTGAAGGGGGACTCGCTGTACTCCTATTCTCAGCACCTTCCTTTGAACGACAGAGAACAATGAGGAAAACAGCCAGGCAATCAATACTCAATCTGAAACCAACAGGAGGGCAACTTGCTGCATCAACGACAAAAACTAGGGCTGGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11975
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000100895 | Nonsense | 236 | 450 | 5 | 8 |
ENSDART00000144045 | Nonsense | 236 | 441 | 5 | 7 |
The following transcripts of ENSDARG00000069374 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 13 (position 21753063)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 21482401 |
GRCz11 | 13 | 21612851 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTGCTGGGCAAGAGATGAGTATAAGCGTCAGTCACTRCGAGCCATWGAG[A/T]AAGGTCATGTAGCTGGTCTGAGYGGCCACTTCCAGAAACAATCCCAACGT
Long Flanking Sequence:
TGTTTCTCTCTGATGTTATTTATGATATGCATTTTTGCTGTTAAGCGGAAAGCACGCAGCATACAATATATTTATATTCATTTAATTGCCATCTGCAGTATCATAAGCATTATGAGAACGTTTGGTAATACTACGCTCCTCCAAAGGTATTTAGAACTTTTTTCTCAAGTTAAAAACAGCAGTTTTATTTGCTGTTAGAATATTGGGGCCATAACATGAGAAGTGCTAATGATACAAAATTTAAAACAGTGTTCAGAAGCAAAGGAATCAACTACCTTGTTCCAAAAAAAAAACCTCAGATATACAGTACAAGCTGGATTTTCCAACAAAGAAAGTTTTTTTTTTTTCTAATCCCATTATTTCTCTTATCATTTCCTGCATTCAATCATCTTTCTTCTTTCTCTTTAGTGTGCCGCTGCAAAGCAGCAGATGAGGAGATGACAAGAAAAGCTTGCTGGGCAAGAGATGAGTATAAGCGTCAGTCACTGCGAGCCATTGAG[A/T]AAGGTCATGTAGCTGGTCTGAGTGGCCACTTCCAGAAACAATCCCAACGTAGACACAGTGCTTTCATCGAACCATCTGCTAGTCCAGTCTCCAGCAATGAAGTCAGACCCAAACCCGGTCTTCAACGTGCAGAACCCCCGTTATACAGACGAAGACAAAGTCGCAGGCACAGTACAACAACAACGACACAACCACTAATGGACAGGTAACCATTCTGTACAGCAATAACAGCATATGACACTAGGAGTTTATTATATCTCAGGGCGTTCAAATGCTTAATTTGTTTTAAGATATGCAAGTGGATCTTGACCACATTAGAGATATACAAATCTTTTAAATTAAATATTTTTAACTTAATTTTGATGAAAAGGTTTTATTTTGCTTAGATTAAGGGAATGAGTTATATATAATATAAATCCCCAGAGTAACCTATTTTGTGTGGGGGATAAAATTATAATTAAACCAGATATAGCTAAAATGTCAATGTAAACACAGCTATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7371
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Missense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000100895 | Missense | 360 | 450 | 7 | 8 |
ENSDART00000144045 | Missense | 360 | 441 | 7 | 7 |
The following transcripts of ENSDARG00000069374 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 13 (position 21761818)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 21491156 |
GRCz11 | 13 | 21621606 |
KASP Assay ID:
554-4027.1 (used for ordering genotyping assays)
KASP Sequence:
CTCTCCTAAAGGCATCATCTCTCGRGAGGACTCAGAGACCCTGCTTATGA[A/T]TGCTRCTGTGGGCTCTTTCTTGGTACGGGTCAGTGAAAGRATATGGGGCT
Long Flanking Sequence:
AAAGTATTAAATACGTTTCAGTAATTTGCTACTATCTTCTAATGTTATTCCATTGTTGTTACACATAACTCTTTTTTTCTGATTATTTTATTGTTTTGTTTTATTTTTATGCTTGTATTATTTGGCTTTTTATCTTCAATTCTAAGTCAACAGCTCCTTTAGAAATATTATTCCCAGGAAAAAGCATGACGTGTTAAATACTTATTTCCCCCATTGTGATTAAGGGCCTAAATGTATTCAAATTAATCTCTTATTATAAAGTATTAAATATAATATTTTTGCAAAGTATGCTGAAGTGTACAAGGGCAAACAGAGTCTTTGATGTGCCTCAGTCAATATCAACGACGAAAAAAAAACTGTGTAAATGTTTTTGGGAGTTTGTATTAGTGTACACATAATTACCAGTGTAATAAATGGAAACTCTTGACTCCACTGACAGTTTACTGATGTCTCTCCTAAAGGCATCATCTCTCGGGAGGACTCAGAGACCCTGCTTATGA[A/T]TGCTGCTGTGGGCTCTTTCTTGGTACGGGTCAGTGAAAGGATATGGGGCTACACACTGTCTTATCGTACTGCCAGCGGATTCAAGCATTTCCTTATCGATGCTTCTGGAGACTATTACAGCTTTCTGGGTGTGGACCAAAACCGTCATGCCACCCTTGCTGACCTCATTGACTTCCACAAGGTAAGTGAGCAGAAAAGGTTTCAAGGAACAGTTCTTCCAAACATGAACTCACCATCAAGAATATGATAGTCGTCCAAAATTATTCATACCCCTGGCAGTTTCTGATTTAAAGTTTTGTGTAAATGTAAATAAAAGAAATATATTTTATATATATATATATATATATATATATTCCAGTAATTCTTATTAAAGTTCAGTTATTCTTAGTAAAAAAACATTAGTGTGCCATTTGGGACAACACTACATACATATACTATCATGTTAAGTGTGTAAGTGCATAAGTACACAGTGCATGAGTGCATAGTGTATATTGTGGCAT
Associated Phenotype:
Not determined