ZMP
hoxd4a
Ensembl ID:
ZFIN ID:
Description:
Homeobox protein Hox-D4a [Source:UniProtKB/Swiss-Prot;Acc:O57374]
Human Orthologue:
HOXD4
Human Description:
homeobox D4 [Source:HGNC Symbol;Acc:5138]
Mouse Orthologue:
Hoxd4
Mouse Description:
homeobox D4 Gene [Source:MGI Symbol;Acc:MGI:96208]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31696 | Nonsense | Available for shipment | Available now |
| sa30912 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa31696
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082355 | Nonsense | 52 | 256 | 1 | 2 |
Genomic Location (Zv9):
Chromosome 9 (position 1941422)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 1949826 |
| GRCz11 | 9 | 1950623 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAAATTTCCTCCTTGCGAGGAATATTCTCAGAACAGCTATATACCTGAA[C/T]AGAGCCCAGGCTACTACAGTCCGTCGCAGGACACTGATTTCCAGCATCCC
Long Flanking Sequence:
TTATACACTCACACACACATGCTTGGTTATGTGGCATGAGAACATGTTTTTATGATAGCATCTAATGTGTAAATAGAGATCCTCCCATATGATGATGAACAATTGGCTATTGCATGAGTCCCAGCACTGCTTTCCTCCTTGTCTCTTTCTTTTATATGGGTATTTAATCAATAAAATTTTATATTGTGTTATTTCCATCCTAATTGAGAGATAATGTGAAGTTTGTAAAAATCACTACTAGGTGTGCACAGCTTCTTCTCGGTTGATGAAGTCCCTCCACCTCGATTGGCCAAGCTGGTCACATGGTAGGCTAACTTTATTCAGTTGACAGCAAGTAGGAGGGCTTTATGGAGGGAGGAAAAAAAGACAACTCGAGAAAAATTAGTATTTCCTACCTTCAGAAATTAATGGCCATGAGTTCGTACATGGTGAACTCCAAGTATGTGGATCCCAAATTTCCTCCTTGCGAGGAATATTCTCAGAACAGCTATATACCTGAA[C/T]AGAGCCCAGGCTACTACAGTCCGTCGCAGGACACTGATTTCCAGCATCCCGGAATCTATTCACGGTCAAACTACTCTGAACAGCCTTACAGTTGTAGCACTGTCCAGGGCTCGTCGGTGCAGCCGCGGGGTCATGTGCAGGATCAAGCCAGCACCCCTAGCCCTTTCCCTGCACAGACAGAGCAGTGTCCCGCGGTCCAGATTTCCGGATCGAGGACTGGTGGACAACAACAAAACACAAAGACCCAGAACGGGATACCAACGAAGCAGCCTGCTGTAGTTTACCCGTGGATGAAGAAAGTGCACGTTACTACGGGTAAGATCCACTCTCTTTGCTGTCTGCTCGCATAGGCCATCCCTATTCTGCTGTTTTAGCCACAGTTAAAATCATTGAGTGAAATATTTATGGGTTCCTCTGAAGGGGCCGCCAATTACACCAGCCATAAATTTTTATTGCTTAGGAAATAGGCCGCTAGCTGTGTTGGCCACTCTTGCAGTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30912
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082355 | Nonsense | 215 | 256 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 9 (position 1940541)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 1948945 |
| GRCz11 | 9 | 1949742 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATCGCGCACACACTCTGTCTTTCTGAAAGACAGATTAAAATCTGGTTT[C/T]AGAACAGGAGAATGAAATGGAAAAAGGATCACAAACTACCAAACACGAAA
Long Flanking Sequence:
TTAAAATCATTGAGTGAAATATTTATGGGTTCCTCTGAAGGGGCCGCCAATTACACCAGCCATAAATTTTTATTGCTTAGGAAATAGGCCGCTAGCTGTGTTGGCCACTCTTGCAGTATTGAGAGTCCACTTGGCCCGAAGCTTTGATTTAAACAATTTAGCCATGATAAACTTTTTTATTTTTAAATCACAGACACTTAAAATCTGCTATTTCACTTTAAAGAAGTGCTTGTTACTTTTGGTAAAAGTTTAGATATTTGAAAATGAGTGGATCGGATATGTTTGCAGATTTTGTTTAATGCAAAAGTGTGATTTTGTCCTTCACAGTGAACCCGGATTACACAGGACCTGAACCCAAACGTTCTCGGACAGCCTACACAAGACAGCAGGTTCTCGAACTAGAGAAGGAGTTTCATTTTAACAGGTATCTAACAAGACGGCGTCGCATCGAGATCGCGCACACACTCTGTCTTTCTGAAAGACAGATTAAAATCTGGTTT[C/T]AGAACAGGAGAATGAAATGGAAAAAGGATCACAAACTACCAAACACGAAAGGAAGATCGGCATCAGTTGGAAATCAGCATGCACAACACGCTCAGAAGGACAGCCAGACAGAGATCACAACTTTATAAGTGGATATCTCTCCCTCCCTTCAGATGTACAGATGAACTGTATGTAATAGACAATGCTTAATTTGACATTGCATGGTAGAAAATCATGACATGTTGGGTCTAAGTGCCAAAAACTGAGAAGCTGAAGCACACACCATGACTTAATGCAGCGTAAAAGCTGCTTTGCGTTACAATTCCCAATATTTCAAATATTGTAACCCTTTGTATGAGAGGCAAAGAGGATATGAGGCATCGAATGATGGTTCACAAATCACCACGAGGTACAGTAAAACGTCATAAAGCTTACGATTTTACACAAACTTGCCAAATTTATTTGAGAGCATGGTCTTTTAGTGATCCAATTCAATTCGTTATTTTGGAAAATCTCTGTAT
Associated Phenotype:
Not determined