ZMP
si:ch211-241d21.7
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to H.sapiens C1orf164, chromosome 1 open reading frame 164 (C1orf164) [Source:
Human Orthologue:
RNF220
Human Description:
ring finger protein 220 [Source:HGNC Symbol;Acc:25552]
Mouse Orthologue:
Rnf220
Mouse Description:
ring finger protein 220 Gene [Source:MGI Symbol;Acc:MGI:1913993]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31641 | Nonsense | Available for shipment | Available now |
| sa27161 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa31641
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089411 | Nonsense | 292 | 565 | 5 | 15 |
| ENSDART00000133952 | None | None | 111 | None | 4 |
| ENSDART00000134534 | None | None | 247 | None | 3 |
| ENSDART00000143000 | None | None | 113 | None | 4 |
Genomic Location (Zv9):
Chromosome 8 (position 18781499)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 18226387 |
| GRCz11 | 8 | 18262099 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACATAAAGAGAGAAGGTTCCTCTTCTGCCTCTTCTCCACGTCCTGCTGAT[G/T]AGGCTGTGCACTCTGACAGGTACCAGGTGAGCACATGTTATATTATATAA
Long Flanking Sequence:
AAACTAAAAAATAAAAAATGAATGCAACCATATAAACATAATTAATGCAGTATGTCAAACCTTTAACTTGCATAATAAAAAACAACCAGCAGGAAGTGGTTAAAAAAGGCCAATTTTTCAACCCTGCTGTTAAGTATATTGTTAACCCTTTGATGCACTACATGGGTCTAAAGTCTGTTTTATAGCTTGTGCACCTAAGGGTAAACAGATTTTACTTACATTTTCTTTGCCATACTTCATTTCTTGCATCTTCTGATCCATGTTTAATGGGATAGTGATGTTAATAAGACTCTGGTGTTTACAGTCAGGGTCCTGCTCAGAAGGAGTGTCTCTCCGCTGGGCCGCCTAAGGTACGGATGCTCCAGTGTACTTGTTATATACAGTTTATTTGTCTCAACAGGTCATAATAACCAGTATCTCAATGTCTCTCTCAGTCTCTGTTTTCTATGCACATAAAGAGAGAAGGTTCCTCTTCTGCCTCTTCTCCACGTCCTGCTGAT[G/T]AGGCTGTGCACTCTGACAGGTACCAGGTGAGCACATGTTATATTATATAAAGCTAATTTAAGTGTGCTTTATTTATTTCTGGAGAGAACACGTCAGTCAAGTGTTTGTAACAGCACTAGGTATAGTGCTGCCCTCTTCTGGACTGAAATGGAATTGAAAATACCATTTGAAAGAACATTTGGTCGTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATCGCAATAAATTCACATGAATGTTCGCTTTTATAATGTACATTTCCCAAGCTTAGTGTCACTCTGGCATTTTTGTAATTTAGTTTATAATGTGATTAAGATTACAGTATGAGTATTAAAATATATCTCGTTTTCCTTCTCTTTTTTCATTTCAGACATTTTTGCGAGTACGATCGAACAGGCAAACGAGACTGAATGGTATGTTGTCAGTGACTTACATTTCATTCATTCCCTATGCAGGCACATAAACATTCTGACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa27161
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089411 | Essential Splice Site | 367 | 565 | 8 | 15 |
| ENSDART00000133952 | Essential Splice Site | 53 | 111 | 2 | 4 |
| ENSDART00000134534 | None | None | 247 | None | 3 |
| ENSDART00000143000 | None | None | 113 | None | 4 |
Genomic Location (Zv9):
Chromosome 8 (position 18778168)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 18223056 |
| GRCz11 | 8 | 18258768 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGAGCAGAGAAGAATACAGATGGTTTCTGTTCTCAGAGGCTTCAGAGG[T/A]ATAAAACACACAAAAACGTAATTGAACTATGAGCCAAATGTACAGACGCA
Long Flanking Sequence:
GACGGAAAGCAGAAGAAGAGCAGGTATGATGGAAAAAACTTTTCTCTCCCGAAGTCTGTGTGTCCTGTAGATCTGCTTTTACTGGCAGCTCTCAGACTGTCTGTGATGTCTGTGCTTGAGTGACAGGCGGCGTAAGACGTGCCGTCCGCTGTCCTCTTCTGCTAACTCAGCCGTATAATGTAGAAGACAGGTAGACGTGGCCAGGAGGATCAAACAAACTATAAACCTGCATGTGAAATGTTGTTTCTTTTATTTCCCGTTTCTTTACGCAGTGACCTAATGTCAAGAGGGAATTCAGGGCAGGTAGCAGATGAAAGTGCTGTCTTGAGGCTGGTGGAGACATTTTCTCCAGAGATACTGATATGTATGTGTGTGTGTGTTTTACAGAGAGACGGCATGTGTGTTGTTGAAGATGGCTCCGTGATTTCAGCCGGAAGGGAGTTTGAATGGGCTGAGCAGAGAAGAATACAGATGGTTTCTGTTCTCAGAGGCTTCAGAGG[T/A]ATAAAACACACAAAAACGTAATTGAACTATGAGCCAAATGTACAGACGCAGCCATAAATTACAATCTGTGTACGTAAGGAATCCGACTCGAGTCAGATATGAGATTAGAAAAAGATATATATAACGTTTATTATAATGGAGTCTTGTTCCATCATGTTTTTTTTTATTTCAAACATTTGACATTTTTCTTGCAATTGCATGTTAATATACACTCACTGGCCACCCTATTAGGCACACCTTACTCGTACCAGGTTGGATCCCTTTTTCCCTTCAGAACTGCCTTAATCCTTCGGCATAGATTTAATAAGGTACTGGAAAAATTCCTTAAAAGATTTTGGTCCATATTGACATGATAGCATCACACAGTTGCTGCAGATTTGTTGGCTGCACATCCATGATGCGAATCTGCCGTTCCACCACATTCCAAAGGTCCAAAGGTGCTCTATTGGATTGAGATCTGGTGACTGTGGAGGTCATATGAGTACAGTGGACTCATTGTC
Associated Phenotype:
Not determined