ZMP
lhx9
Ensembl ID:
ZFIN ID:
Description:
LIM/homeobox protein Lhx9 [Source:UniProtKB/Swiss-Prot;Acc:Q1LWV4]
Human Orthologue:
LHX9
Human Description:
LIM homeobox 9 [Source:HGNC Symbol;Acc:14222]
Mouse Orthologue:
Lhx9
Mouse Description:
LIM homeobox protein 9 Gene [Source:MGI Symbol;Acc:MGI:1316721]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa14260 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa14260
Status:
Available for shipment
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For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000054807 | Essential Splice Site | 126 | 396 | 3 | 5 |
| ENSDART00000079556 | Essential Splice Site | 126 | 330 | 3 | 5 |
Genomic Location (Zv9):
Chromosome 22 (position 24978116)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 23236845 |
| GRCz11 | 22 | 23251625 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAAATGTTTTCATCNNNNTATGTTTGATTGTAAATGGTGTGTGCTGTTCC[A/T]GAAGGTTCTCCGTGCAGAGATGTGCCCGCTGCCACCTCGGCATATCCGCT
Long Flanking Sequence:
CGTGTTTCGCAAAGGATGGCAGCATTTACTGCAAAGAGGATTACTACAGGTAAGCATTAACTTTGAGGCTTAAATCTTGCGTTAGGCCTGTTTAGTAGGCCTAACTTTTTTTTTCGAACACACATAAAGGCTGGTGACATCTGAGCTAGTGTAAGCCATTGACCCATATAGTGATCTTCAGTGATTAACTGACACGCCTAAATTAATCTAATAAACCTAATTAATTCATGCTCAGTGCGTCTATTTTTCTATTCAATTTTTAGCCAGTTGTTTTTTTTAAGGAAAACGAATTATGTCAGACTATAGAAGATACAACCATTTTTCCAAATAAATGTACACATATATAAATAATAGCAAATGCGTGCATTTAAAAGATTTTGATTAATAAAAATATCTAAATTTCACGTGCACCCGCTTTTTATATGTTAAACGTATTTGTTAATGACATACTAAATGTTTTCATCAATCTATGTTTGATTGTAAATGGTGTGTGCTGTTCC[A/T]GAAGGTTCTCCGTGCAGAGATGTGCCCGCTGCCACCTCGGCATATCCGCTTCGGAAATGGTGATGCGCGCCAGGGACTCCGTGTACCATCTGAGCTGCTTCACCTGCACCACATGCAACAAAACACTGACCACGGGTGACCATTTCGGCATGAAAGACAACTTGGTTTACTGCCGGGTTCACTTTGAGACCCTTATTCAGGGAGAGTATCACCCTCAATTAAACTACGCTGAATTAGCGGCCAAAGGCGGAGGGCTTGCGCTGCCTTACTTCAATGGCACCGGCACGGTGCAGAAAGGAAGGCCACGAAAGAGGAAGAGTCCGGCGATGGGGATTGACATCGGCTCTTACAGCTCAGGTGAGATGTCAATTTACAGCTGCTCAGTGGCGTTGCTCACCATTTATTTTGGTTTATTTCTGAGTGTTCGTGTTCGTTTTGTTAGCGGAGTAATTTGATTCTTAATTCGAATCTTTCGGCTTTCGAAAAAGACGATCAGGACA
Associated Phenotype:
Not determined