ZMP

sec61al1

Ensembl ID:

ENSDARG00000021669

ZFIN ID:

ZDB-GENE-020418-2

Description:

Protein transport protein Sec61 subunit alpha-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q90ZM2]

Human Orthologue:

SEC61A1

Human Description:

Sec61 alpha 1 subunit (S. cerevisiae) [Source:HGNC Symbol;Acc:18276]

Mouse Orthologue:

Sec61a1

Mouse Description:

Sec61 alpha 1 subunit (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1858417]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa40755	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa31532	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa40755

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000034730	Essential Splice Site	154	476	6	12

Genomic Location (Zv9):

Chromosome 6 (position 40000079)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	40071679
GRCz11	6	40069215

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GAGACCCTTCAGAGATGGGTGCTGGCATCTGTCTGCTGATCATCATTCAG[G/A]TGAGAGAGCATGGACACAATGTGTGTATTTATTACCTGTATAATGTGGCT

Long Flanking Sequence:

TAGGGGTTTCAAGTTACTCTTTTGCATGCCTGTATTAAGGAATAGTTCACCCAAAACTGAAAATTCTGTTATCATATACTTACCATTAACTTGTCACAAATGTATTTGAGTTTCATTCTTCTGTTGAACACAAAATAAGTTACTTAAAAACATGTTGAAAACTGGTAACTATTGACTTCCATTGAATTTCAGTTTTTCCTACTATGCAAGTCAGATTTTCAACATTCTTTTAATTTTTTTGTGTGTTTAGCTGAAACAAAACTCATAAAGGTATGAAACCATTTGAGGGTGATAATTTTTAACTCGAGTGAACTATCCCTTTAATATTGCTGAGTTATAGATTAGTTATTATAATGCAACAGTGATGGTAATTGCTTAATTGTTTTCCAGTGTTTGGTATGATCATCACCATTGGCCAGGCTATTGTGTACGTCATGACTGGAATGTATGGAGACCCTTCAGAGATGGGTGCTGGCATCTGTCTGCTGATCATCATTCAG[G/A]TGAGAGAGCATGGACACAATGTGTGTATTTATTACCTGTATAATGTGGCTTTAAGCTCAGGGATTTGTATATTGTTATATGCATGTTTTGTTTTTTATTAAAGAGTGCAAGGGGTGTGATTTAAATTTATTTATTTTTTTTTTCCTGTAGTTGTTTGTGGCTGGTCTGATCGTGTTGCTGCTGGATGAGTTGCTGCAGAAAGGTTATGGTTTGGGCTCTGGTATCTCTCTCTTCATTGCCACTAACATCTGTGAGACTATCGTATGGAAAGCATTCAGCCCAACCACAGTCAACACAGGCAGAGGTGTGTTCAGGACACAGCATATCATTTTGAGCAATGCTGTAGTGTCATGAGTGACGAGTTGGCTAAATTTTGTTTGTGTGCGTTCAGGTACTGAGTTTGAGGGAGCCATTATTGCTCTGTTCCACCTTTTGGCCACTCGCACTGATAAAGTCAGAGCTCTGAGAGAGGCTTTCTACAGACAGAACCTGCCTAACCT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa31532

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > G

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000034730	Nonsense	474	476	12	12

Genomic Location (Zv9):

Chromosome 6 (position 39997125)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	40068725
GRCz11	6	40066261

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CTTTGAGATATTTGTTAAGGAACAGAGTGAAGTCGGCAGCATGGGAGCGT[T/G]ACTCTTCTAAACAAGGACACTCACAAACACACACATACTTGCTGACACCT

Long Flanking Sequence:

TTCATGCTGGGATCCTGTGCCTTCTTTTCAAAGACCTGGATTGAAGTTTCTGGATCTTCTGCCAAAGATGTGAGTCACCTGTTATTGTTCATTTATCGGCACATACATTTTGATTCTATAAAATGTAATGGCTGAATGTGTTGTGTGTGTGTGTGTTTTAGGTAGCTAAGCAGCTGAAAGAACAGCAGATGGTGATGAGGGGACACAGAGAGACCTCCATGGTTCATGAACTCAACAGGTGAGCGGCAAAAACACTGGATGCTCTGCTTTTAAATGCTTTCTTATCTGAACTTTTATTAACCTCAAATTTTCTTTGTCATCCAGATACATCCCCACAGCGGCTGCATTTGGTGGACTGTGTATCGGAGGCCTTTCAGTAATGGCGGACTTCCTGGGCGCCATCGGCTCCGGAACGGGAATCCTATTGGCTGTTACCATCATCTATCAGTACTTTGAGATATTTGTTAAGGAACAGAGTGAAGTCGGCAGCATGGGAGCGT[T/G]ACTCTTCTAAACAAGGACACTCACAAACACACACATACTTGCTGACACCTTTTTATTATTTTTATGATTGTTGTTGTCATTTAATTCTTTTATTTCGGTGCAATTTGAGCATAATTAGTGGTCTGTCACGAGCGCTGTCTTGGGAGAACGTGCTCTTAGCCGCTAGCTCAGGCCGAGTAAGTTCTCCTGTATGTCAGAAGTGGCAAAACGTTTCTAAAATTCAGTGATGAAGCTGAACTTCAGTAATGGAACAGTAAAGATGGACTCTGTGAGCTCTGACTAGGAATATTTAGATGAATTAAATTTTCTCTTCACATCAGTCTGTCCTTCATCTGTCTCCAGCCATCACCGAATCCATTCATCCACTCTTTTCTTTAGTTCCTGCCTGGTCCTAGTTGATAAAGATTTTCCAGAGAGTATTGCTTATGTTGGGTGACTGATTTACTCGACACTGCCAATTTTGACAACTGCTTCGTGTTTGTCAGTCATATCGGTCTTGT

Associated Phenotype:

Not determined