ZMP
si:dkeyp-50d11.2
Ensembl ID:
ZFIN ID:
Human Orthologue:
CAPN1
Human Description:
calpain 1, (mu/I) large subunit [Source:HGNC Symbol;Acc:1476]
Mouse Orthologue:
Capn1
Mouse Description:
calpain 1 Gene [Source:MGI Symbol;Acc:MGI:88263]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa315 | Nonsense | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa315
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000077657 | Nonsense | 309 | 704 | 8 | 21 |
The following transcripts of ENSDARG00000055338 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 21 (position 26888743)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 27457654 |
| GRCz11 | 21 | 27494349 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAGCTTTGTTGTATGATTTCACCACGTGTTAATTCAGGTCAAAGGAATG[G/A]CGTGAAATCGATGCATCTGTGAGGTCTCGTCTGCACAACTGTCAAGAAGA
Long Flanking Sequence:
GAATGAATTTTGAATGACTTTCACTGGAGGGTCAATGGACGGTATAATGCTATTAAATAGCATAATAAAAGCTTCTATAAGCATGCTAACCTTTATATTACCTTTTTGGGACTATTGTTCAATATTCAAACCCATATTGTATTGACTTTCAGATTACAAGTTTTTTTGACATGGAGGCCATCACCTTTAAAAAACTAGTGAAAGGCCATGCCTACTCCATTACCGGAGTGGACGAGGTGAGTACTGGATTTTGATTGACAACAATCTCAGCCAATTACACAACAGCTGATCACTGGCAGATGTAAATGTGTGGGCCAGGTGGAGTACAGACGAAGCCAGACCAAGCTGCTGCGCATCAGAAACCCTTGGGGAGAGGTGGAGTGGACGGGACCCTGGAGTGATGAGTGAGAATCATGTGAAGATGAAAAATGATTCATCATTTCATGTTGAATAGCTTTGTTGTATGATTTCACCACGTGTTAATTCAGGTCAAAGGAATG[G/A]CGTGAAATCGATGCATCTGTGAGGTCTCGTCTGCACAACTGTCAAGAAGATGGCGAATTTTGGTGGGTGTCTCATGTAGTTTTCTTTTATATCAATATAATGTGTGGTGTACTTGCATATTAGTCAGATAACACGTGGATTTTTGTTTACCTTCATGTCATTTCATCTTCAGAAAACATTTATTTCAAAACAATTATTATAATATACTGTAATGTAATGTAATATGTCCAGCTTGTCTAATCAAAACCACAAAGAACACAAATGAAGATTTAAATCGATTTAATTTTGTCACATATCAGCAAATCTAAACAAGCTCAACCATACTTGATGCGCGAGAACAATTTCATTGGTTCTTGGTGAAGCTCAAATGTCACATAACTGGATAGAATCAACCTGATTGGTTCTCAAGCTTAAAGCAAGCATATGTAAGCTTCTGTTTTTTTTTTTAATTTTTCTTTTTTTTTCTATGCATCAATGTTTATTTACAAATAAAGGCTCAA
Associated Phenotype:
Not determined