ZMP
zgc:112973
Ensembl ID:
ZFIN ID:
Description:
DNA ligase 3 [Source:RefSeq peptide;Acc:NP_001025345]
Human Orthologue:
LIG3
Human Description:
ligase III, DNA, ATP-dependent [Source:HGNC Symbol;Acc:6600]
Mouse Orthologue:
Lig3
Mouse Description:
ligase III, DNA, ATP-dependent Gene [Source:MGI Symbol;Acc:MGI:109152]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44623 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa31480 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa44623
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074426 | Essential Splice Site | 260 | 752 | 5 | 20 |
Genomic Location (Zv9):
Chromosome 5 (position 62535177)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 60170176 |
| GRCz11 | 5 | 60854907 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCGCATACTGAATTGCAATCAGGATGACATGGTGCAAGACTTGGAACAG[G/A]TTTGTAGTGTAGCTTCGAAGGTTTAATTTAGAAAAGAGGAGAGATATTTC
Long Flanking Sequence:
GAGCTTGCGCTACGCGTCGTTGCGACATGTAGTTACATTTTTTTGAGAGGTGCACATCAGCGACGTCGAAGGCCACGGCGTAGGGCTATGTGTCAGCGCTGAGCATACGCCGGCATTTGACGCAGAAGTATAAATCAGCCTTACGCTGCACTGTTTGAGGAAGTTCAACTTGACGAATTCTCTAAAAACAGTATAATCAACAGTAGATAAAAACACAAAGGCTTTAAAAACTGAGTGAGAATAAATTGAGGTCATTTTCATTTTTGGATGAACTAACCCTTTAATATTAACACGAATGAATTATCTCACTGACCCGTTTTAATAAATCTCTCTCCCAAATCTTCACAGACAAATTCAGAGGAGATTTGTACCTGACAGTGAAGCTTCTCCTCCCAGGCGTAGTGAAGAATGTGTACAACCTCAATGACAAACAAATCGTCAAGCTTTTTAGCCGCATACTGAATTGCAATCAGGATGACATGGTGCAAGACTTGGAACAG[G/A]TTTGTAGTGTAGCTTCGAAGGTTTAATTTAGAAAAGAGGAGAGATATTTCACCTTTCTCTCATTGATCTTCATAGGGAGATGTTTCGGAGACGGTGCGGATGTTTTTCGAGGAAAGCAAGTCTTTCCCTCCTTCAGCAAAAAGTCTTCTGACCATCCAAGAGGTGGATGCTTCGCTGAGCCGATTATCCCAGCTCACAAAGGAGGACGATCAGCAGGCAGAGCTGCAGAGCATTGCCAAAAAGTCAGGAAAAGTTCTACATTTGAACTAGGCCTGTCACAATATCTATTATTTGTTGTACAATATATTGTACCAAAATATATTGCGTTAAACGATATTATTGTTATTGTTAAGACCATTTTATGCCACTCACTATATAATGCCAGAATGACAATATAATAGCATTCCAATGCAAGTACACTCTTCCAAAGAACACATAATAATGTATTATTAAGAATATTTAGTTTCATTATAGTAATTAACAATTTAATAATTAGGCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31480
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074426 | Essential Splice Site | 342 | 752 | 7 | 20 |
Genomic Location (Zv9):
Chromosome 5 (position 62537970)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 60172969 |
| GRCz11 | 5 | 60857700 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGTTTGGTCAAACATGATTTGAAAATCAACTCAGGGGCGAAACACATG[T/A]AAGTGATGCTAGCAAATTGTTTTTAAGACGACTGGTACTAAGATACATTT
Long Flanking Sequence:
GGTCACCGAACTCACTGCTGTTTACTGAGTGTAAACACAGATACAGGCACACTGAAGCATTTTAAAGCCACAATTCATTAGCTGATCTCTTGTATGTCAGCTTATAGACAAACCAGCTGATCGAGCTGGCTTTAAAATGCTCCAGTGTCCCTGTATGTGTGTTCACACTCAGTAAACAGCGGTGAGTCAATCACAGTCATCTTTGTTGAGAACATAAACACAATGACAAATCAGTGCTGTTCAAGAACATGCTAAACAGCGCTCAAATGTTAGCAGGATATGGACGTTTTTAAAATTTTAGTATCATGACAGCACTATAACATGGTGAAACTTATTTTCTTGAAAATATGGTGTACAAAATTGGTTTTCAGTCTGTTTAACTTAAAGCACACTCACCTTAAATGTATTTCTTGATTACCAGATGCACCGGGAATGATCTGAAGTGCTACATTCGTTTGGTCAAACATGATTTGAAAATCAACTCAGGGGCGAAACACATG[T/A]AAGTGATGCTAGCAAATTGTTTTTAAGACGACTGGTACTAAGATACATTTTTGATCGGTTCACAGGTGGACTTTCTAAAGTAACTGTTCAAGTAGAGTCTGAAACATTTTAAGCTTATTCACTTTCTACCATGTCCAAAAGTCAGAAACGCATCCAACTGTTTTGCTTTCATAGAATAAACACTTATTTGAACAGATGCATTTAAACAGCCAATAAGGACCTACTCTGTGTATAGTCCATTTTTAACAGTATAGGAATTGTTAAAGGTCCTGTGAAGTGCTTTGCAATTTGCATTTTTTTTCAATGTTTGGATTAATCTCAACTGAAACATGAAAACAGAGTGGGACATATAGTAGCTCCTCCTCTGAAAAATAAACAACCAGTTGTGTTAGGGTTTATTGGTTTAATTAAAATAATAAAATATAAAAACAAATAAGAGGCATCTTAAAGAAGCGGGGCATGTTAGATACTATAGAACATGTGATTGGTCAGAAGATTTG
Associated Phenotype:
Not determined