ZMP
si:dkey-69h6.7
Ensembl ID:
ZFIN ID:
Description:
E3 ubiquitin-protein ligase CHFR [Source:UniProtKB/Swiss-Prot;Acc:A5WW08]
Human Orthologue:
CHFR
Human Description:
checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:20455]
Mouse Orthologue:
Chfr
Mouse Description:
checkpoint with forkhead and ring finger domains Gene [Source:MGI Symbol;Acc:MGI:2444898]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31420 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa31420
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000110783 | Essential Splice Site | 184 | 637 | 6 | 18 |
| ENSDART00000115227 | Essential Splice Site | 184 | 637 | 6 | 19 |
Genomic Location (Zv9):
Chromosome 5 (position 19576448)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 17293940 |
| GRCz11 | 5 | 17797936 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCAGCTCTTCCTTACACTTCTACAACATGCCATTGTCTACCTGCTCTGG[T/C]AATTACCACGCTGCTTTAATAAGTTAAATGACTTCATTGACCCCTTAATC
Long Flanking Sequence:
GACAATCACATTAGTCCGCAGGAAGTACCTTTATCAGCCTCTGTTACTTTTTACCTCAATTTTTTTTGTTAAATTTTTTTTAAAAATGACTATAAATAAATTAAATATACTTAAGAATCAAATATGATGTGTTCTTTGTTAGAATGTACTTGCATTGTTTGTGATGATATTATATTGTCATTCTGGCATTATATAATGAGTGGCATAAAAAGGTCTTAAAATTACAATAATATTTTTACTGCAATATGTTTTGGTGCTATTTATCGTACAACAAAAAATAGATATCGTGACCGGCCTATAACCATTGAAGCCCTCTCTTTGCTCTCTACAGATGCAGGGAGAGAAGAAGATTCTGATCTGACAGAAACGGAGAGTGAACCAGCACCAGTAGAGCCTGTTATCGTGAAGCCTTTACCTCAGTCTGGACATGAGGATCCTCAGCCATCTACCTCCAGCTCTTCCTTACACTTCTACAACATGCCATTGTCTACCTGCTCTGG[T/C]AATTACCACGCTGCTTTAATAAGTTAAATGACTTCATTGACCCCTTAATCAGAACTTGGATGTTTTATGCATGCATGTACAGTTGAAGTAAATGTTTTTTGTTTTGTTTTTTCCAAATTTTTCCAAATGATGTTTAACAGAGAAAGGAATTTTTTTTATAGTAATTCCTATAATTGTTTTCTTTTGAAGAAAGTCTTATTTGTTTAATTTTGCCTAGAATAAATTTTTAACCATTTTTTTTTTTTACCATTTTCAGGTCAATTTTATTAACCCCCTTAAGCGACTTTTTTTTAGATTGTCTAAAGAACAAACCATCTTTACACAACAATTTGCCTAATTAACCTAGTTAAGCCTTTAAGTTGATCTTTAATCTTAAAAAAATATCTAGTAAAATATTATTTACTGTCATCATAGCAAAGATAAAATAAATCTGTTATTAGAAATTAGTTATTAAAATATTATGTTTAGAAATGTGTTGAAAAATCTTTCTGTTAAACAAA
Associated Phenotype:
Not determined