ZMP

si:dkey-164m14.1

Ensembl ID:

ENSDARG00000041205

ZFIN ID:

ZDB-GENE-041210-296

Description:

Transporter [Source:UniProtKB/TrEMBL;Acc:Q5RFU9]

Human Orthologue:

SLC6A1

Human Description:

solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:HGNC Symbol;Acc:11042

Mouse Orthologue:

Slc6a1

Mouse Description:

solute carrier family 6 (neurotransmitter transporter, GABA), member 1 Gene [Source:MGI Symbol;Acc:M

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa26312	Nonsense	Mutation detected in F1 DNA	Not yet available
sa31401	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa26312

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000011519	Nonsense	211	578	5	14
ENSDART00000138830	Nonsense	105	445	3	11

Genomic Location (Zv9):

Chromosome 4 (position 26315900)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	27025035
GRCz11	4	27014323

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ATGGCCATTGGTTGGAACTTTGGCATTGTCCTGGATTCTTGTCTATTTCT[C/A]AATCTGGAAAGGGGTGGAGTGGACAGGAAAGGTATGCATGCCAACATTTG

Long Flanking Sequence:

GTTATGAAGTAGATGCTGGACAACAGACATGCAGATCCACATGCAGTTTATAAATGGTAGTTGTGCTGTCAAAGCTCAAAAACAGGCGAAAGGCTAGACAGCAAAGAATCAAAATGCTCAACTAGACAAGGATCAAAACAAACAGGGAAAAACAGTTCATAGGAATCTCATATTCAAATTCATAGGAAAAACAAGACTCAGCCAAGTGTCCATGAAAGTGTGTGGTAAATATTGTCCATGTAATCAGTGAAGATGAGCTACAGCTGTGTCTGTGTGTCCGAATTTTTGTCAGCTGTTGCAGAAGTTGAGGGGTGAAAAGAGTTCTGGGAGTTTGTTCTGGGAGTTTGTTATATATATATATATATATATATACTTTACCTATCACATTCATCTTTACAGGAGGAACATGCACCAGTTAACAAATGGTTTGGAAGAACCTGGTGAATTGCGATGGCCATTGGTTGGAACTTTGGCATTGTCCTGGATTCTTGTCTATTTCT[C/A]AATCTGGAAAGGGGTGGAGTGGACAGGAAAGGTATGCATGCCAACATTTGTATTTTCAACCTTTCATTGTTCCCAATTTTACAAAGTTACAGTATATTGTGATGGCCCTCTTTAGACATCCTGTTGAATATACATAACTATGCAGCTTGTCAATTAGTCACATATGGCCAGATACTTACACTGTGACAGCAACATTAAGGATGATATAGATTTGTAGAGTGTTTATCAACACAGATATTTCCAATAAAAACACATGGCAACTTGTTATGACAGGACACGCTAACAATAGAGGTAGTTCCAAATGCAGCTTTGTTATAAAATGGGATTGTCGAACAGGCAAGGGTAAACAGGAGCACAGAGAACAACAAAGAAAATCCAGAGAGTAATCCAGATAACAGGCTAGGGTCAGGGCAGGCAGAAAACGATCAAAAACTGGAAACACAGTCTAGGGATCAAGCTCCGACAGACCAACAGGTAAACACTTAGAAAAGCGCATAAAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa31401

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000011519	Nonsense	428	578	11	14
ENSDART00000138830	Nonsense	324	445	9	11

Genomic Location (Zv9):

Chromosome 4 (position 26363421)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	27077742
GRCz11	4	27067030

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAACTGAGACTGATTGTGTTTTTGTTGTTGTTTTTTTAGGGTGGCTTATA[T/A]GTGTTTAAACTGTTCGACTACTACTCAGCCAGTGGAATGTGTCTTCTTTT

Long Flanking Sequence:

AATGGAGATGTTATATCTCATTGCCACAGTAGCTGAATCCCCAGTTGAATGCTAAGCCACACTTGACTCCACATTGATACCCTGAAGTGATGTCGCACATGAGGTTCTTACATATATACTTAAATGTCTGCACCTGTGAGATTGCGTTTGCCAATTCCAAAGGCATTTCATTGGCTGTTTCTCTTGTGGTTTGCTTAGTCTGTCATTCCAACATAATATCTACATTCAAGGGTTACCTCCATAAATGAGAATGTTTCTTACAAGAGCCAATTTGTTACAATGGTTACCTATTCTGTTTGCCTGTCATTTGTTTTGTGTAGTTCACTGTTAATTATTGTAATTTATAAGTTTGGTTTGTGCCTGCATTCTGCTTAAAGTGTATTTATGTTTGCTAAATAAAGACCATTTTTTATTTAATTAATTAAAGTCAATTGTGTTGAATTGCTATCACAACTGAGACTGATTGTGTTTTTGTTGTTGTTTTTTTAGGGTGGCTTATA[T/A]GTGTTTAAACTGTTCGACTACTACTCAGCCAGTGGAATGTGTCTTCTTTTCCTGGTCTTCTTTGAGACAATCTCCATTGCTTGGTTTTATGGTACTTTTGTTCAATGTTGTCACTGTTTTTGATCTCTAGCTTGGGTGAAAAGGTTTGATTTTTAAAGTTGGATATATTTTCTTTTTTTTTCAGGTGCAGAGAAGTTTTATAAAAATATTGAAGAGATGATTGGTTATAGGCCTTGTGGCTTTTGGAAACAATGCTGGATTTACTTTACTCCAACCATTTGTTTGGTAAGCACTTTATCACACAAACTATATTGATGTCATTTTTTAAACTAAATTAATGATACATTTTTAATCATTCTGGCTTTTCTGTTTTGCAGGGTGTTTTTACGTTCAGTGCCATAGAAATGACTCCGCTGACACTGGGGAAGTATGTGTACCCAGCCTGGGGTCAGGGAGTTGGCTGGCTAATGTCCCTTTCTTCAATGGTACTGATACCCGGT

Associated Phenotype:

Not determined