ZMP
lemd3
Ensembl ID:
ZFIN ID:
Description:
inner nuclear membrane protein Man1 [Source:RefSeq peptide;Acc:NP_001038329]
Human Orthologue:
LEMD3
Human Description:
LEM domain containing 3 [Source:HGNC Symbol;Acc:28887]
Mouse Orthologue:
Lemd3
Mouse Description:
LEM domain containing 3 Gene [Source:MGI Symbol;Acc:MGI:3580376]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40250 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa31386 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa40250
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000013604 | Nonsense | 326 | 841 | 1 | 13 |
| ENSDART00000108552 | Nonsense | 297 | 812 | 2 | 14 |
Genomic Location (Zv9):
Chromosome 4 (position 11993556)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 12930183 |
| GRCz11 | 4 | 12929032 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTTCTTTCCATAGGAATCACCTCGACAATGGAGACGGCGAATCCGCCTG[C/A]AGCAGCCGGTTCAGCATCGGTCTCAGACCACGCTTTCCTTCCTACACCGC
Long Flanking Sequence:
TCCGCGGACAGGAAAAGCGTTTCTGGCTCTCCGTGGTGGGCAGACCGGGGGAAATCGGGTGATTTAGCGGAAACGGAAAGAGACAGTCGGGCTGTGAATGGGAATAAGGCTTTTTACGAGTCGAACAGTAGTAAGTTAGCCAGGGATTACTCTGATTCCGACGAGGAGGAGGAAGAGGTGGGTGAACGAGACCGTCCGCGCGAACGCCGTCTGACTTCCAGACACAGTCCACCCGCCTCTTCTTCCCCTTACCGGAGCGCCTGGAGCTCGGATAAGACGGCGCTGGGCGCGCATGATACACCAGACTACAACCTAGATATGGTCGGGGAACGGAGGGACGAGGATGACAAGGAACCTAGCGAGTTTAGCGGAAGCTACGTGAGCCGCAGCTACCCGAAACTGTCCGGAACGGGCAGGGATGACAACAGCGGTGGGAGCAGCATCCCGTCTGGTTCTTTCCATAGGAATCACCTCGACAATGGAGACGGCGAATCCGCCTG[C/A]AGCAGCCGGTTCAGCATCGGTCTCAGACCACGCTTTCCTTCCTACACCGCGACTTACCGAGCGAACCACTCGAACCACACCGGTTCCAATCACTCCTATAGCCATGCTTCAGCTCACAAGTCCAAGCAGCACACCACGGTCCCGGAGGACGAGCTCCTGCAGCAGTTTAAGCGGGAGGAGGTGTCCTCCACCGGCGGCTTCAGTGCCCACTACTTGTCCATGTTCCTCCTGACAGCCGCCTGCCTGTTCTTCGTGCTGCTGGGCCTCATGTACCTGAGGATGAGGGGCTCCGGCACCGCCGTGGGTGATGCAGTCAGTAAGTATGATGTTGGCATGTACATCAAAACTTGTCAACAAGAAATATTTAGAGCGGTAAAGTCAGGTAAAAAAATTTACATAATGACACATTTAGTTTCAAAGTCATGGGGCTGTCTCTAAACTTAAACTTGGCAGGGTAAATTAATGATGTGCTGTGCTATTGGATGGTATACACATAAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31386
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000013604 | Essential Splice Site | 445 | 841 | 2 | 13 |
| ENSDART00000108552 | Essential Splice Site | 416 | 812 | 3 | 14 |
Genomic Location (Zv9):
Chromosome 4 (position 11989108)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 12925735 |
| GRCz11 | 4 | 12924584 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTCAGTCATGCAGCATCCATTCGGAGCTGAGTTTGATAAGCAGTATG[T/G]AAGTATCTGTCCTGTGTTTTAATCTTGCATTGAAAAATGGATGAATAGTC
Long Flanking Sequence:
CAATGAATAACTTCATTGGTTATTACTATTGTTAAAGTTTTAAATAGACCCAGTACTTCATCACTTGACATCTAAGTCAAACCTTGTCATGAAACGAAAAAACTGTCTGTATGTTTATGGCTTCCTCTCAGAAACTCAAATGGTTTACACTATCAGACGGCTCATATTTAATATGGCTGACTAATGTAGTCTACGATTGAGAAAAGCAGGGCAGTCGCTTGCTAAATTTGGGCCCAGGCCAGAGTGAGGACAGATACGCAATGTTCAGACAATGACTCAAGTGTGAGACGACGAGAGGCTCATGCTTATAGTCGCACCCTCAAGTGTCTGTCTGTCTGTTCTCAGCATGGTTGGGAAACACTGTCCAGTCATATTACTATAACGTTACTGAATGTTACGAGATTTTACCAGATGTTGAATAATGCAATTTTGTAATCTTAGTTTTCTTTCTTTTTCAGTCATGCAGCATCCATTCGGAGCTGAGTTTGATAAGCAGTATG[T/G]AAGTATCTGTCCTGTGTTTTAATCTTGCATTGAAAAATGGATGAATAGTCTGTAAATATGTATTTGCATTGGATCTACAGGACGTTAAAGAGCGAGAACTCATCCTTAACCTTCTCTTGTCTCTACATGAGCACCTGGCCAGTGTTGCAGGTGAGTTAAAGCACATATTTTTACCTCTCTAAGCATAGTACTGAGTTAAAATCGGTGTCTATGGATAATTTTTTAAATTGTGCATCTTGTTTGCCCTTTAGGAGAACATGATTGTGGAGATTTTAAAAATCCTTTAAACAGAAGTGTCTCTTTTAGTGACGCCTCCAAGTACCTCAAGGTTTGTTTTGCGTTTTGAAGGGTCTGGTGCTCCCTTTTCATTTCTGTCAGTCTAATTAGCTTGTTTTTTTTATACTGACATGGACATTTGGTCTTATTTAGTTTGTCAGTGTGAAAATGCACATCATAATAAAGTGTCCTTCTCTTTCAAGCTCCAAAATGAAGCCTATGAA
Associated Phenotype:
Not determined